| GenBank top hits | e value | %identity | Alignment |
|---|
| RVW71911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.4e-157 | 76.54 | Show/hide |
Query: EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNK
E S +PK+W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELVPRPSN S+IGTKWVFRNK
Subjt: EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNK
Query: MDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLK
MDENG I+RNKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLK
Subjt: MDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLK
Query: QAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTK
QAPRAWY+RLS FL+ FKMGK+DTTLFIK KE DMLLVQIYVDDIIFG+TN SLCE+F+KCMHSEFEMSMMGEL++FLGLQIKQLK+G FINQ KY K
Subjt: QAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTK
Query: DLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
DLLKRF K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM+S
Subjt: DLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
|
|
| RVW71911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 5.0e-17 | 52.43 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERNFGDL
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+G I L
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIERNFGDL
Query: LVS
+ S
Subjt: LVS
|
|
| RVW71911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.1e-156 | 76.54 | Show/hide |
Query: EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNK
E S +PK W++ ++HP+D I+G+ GV TRSS+ N+ NNLAF+SQI+PK++KDA DE W++AMQEELNQFER++VWELVPRPSN S+IGTKWVFRNK
Subjt: EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNK
Query: MDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLK
MDENG I+RNKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLK
Subjt: MDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLK
Query: QAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTK
QAPRAWY+RLS FL+ FKMGK+DTTLFIK KE DMLLVQIYVDDIIFG+TN SLCE+F+KCMHSEFEMSMMGEL+FFLGLQIKQLK+G FINQ KY K
Subjt: QAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTK
Query: DLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
DLLKRF K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM+S
Subjt: DLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
|
|
| RVW80634.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 5.3e-176 | 59.74 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT--------
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT--------
Query: ---------------------------------------------------IERNFGDLLVSDNGKEIVTSKE------------EMSLKEEGSSSMPKE
+E + G L + D ++ + ++ ++ E S +PK+
Subjt: ---------------------------------------------------IERNFGDLLVSDNGKEIVTSKE------------EMSLKEEGSSSMPKE
Query: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELVPRPSN S+IGTKWVFRNKMDENG I+R
Subjt: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
Query: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
NKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLKQAPRAWY+R
Subjt: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
Query: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
LS FL+ FKMGK+DTTLFIK KE DMLLVQIYVDDIIFG+TN SLCE+F+KCMHSEFEMSMMGEL++FLGLQIKQLK+G FINQ KY KDLLKRF
Subjt: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
Query: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM+S
Subjt: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
|
|
| RVW93906.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.5e-170 | 59.02 | Show/hide |
Query: MKATWDDSDES-ASGSDEEVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIER-----
M ATW +S+ES ++EVAN CFMA D DE SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+ +E+
Subjt: MKATWDDSDES-ASGSDEEVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIER-----
Query: ------------------------------------------------------NFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSSMPKE
+ G L + D ++ + KEE L + E S +PK+
Subjt: ------------------------------------------------------NFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSSMPKE
Query: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELVPRPSN S+IGTKWVFRNKMDENG I+R
Subjt: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
Query: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
NKARLVAQGY QEEGIDYEETF VARLEAIRMLLAFA +K+F+LYQMDVKS FLNG+I EEVYVEQPP F++ FP+HV+KLKKALYGLKQAPRAWY+R
Subjt: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
Query: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
LS FL+ FKMGK+DTTLFIK KE DMLLVQIYVDDIIFG+TN SLCE+F+KCMHSEFEMSMMGEL++FLGLQIKQLK+G F+NQ KY KDLLKRF
Subjt: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
Query: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
K+ +TPMS+ KLD DEKGKS+D YRGMIG LLYLTA +PDIM+S
Subjt: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
|
|
| RVW98982.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 2.6e-175 | 60.29 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT--------
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT--------
Query: ---------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSSMPKE
+E + G L + D ++ + KE+ L + E S +PK+
Subjt: ---------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSSMPKE
Query: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELVPRPSN S+IGTKWVFRNKMDENG I+R
Subjt: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
Query: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
NKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLKQAPRAWY+R
Subjt: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
Query: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
LS FL+ FKMGK+DTTLFIK KE DMLLVQIYVDDIIFG+TN SLCE+F+KCMHSEFEMSMMGEL++FLGLQIKQLK+G FINQ KY KDLLKRF
Subjt: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
Query: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM S
Subjt: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9ERY5 CCHC-type domain-containing protein | 5.9e-173 | 64.71 | Show/hide |
Query: MKATWDDSDESAS---GSDEEVAN-------------------FCFMAHSDKEDEQE--------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
+K TWDDSDES S SD EVAN FC +A +D E E DEVCL S K KW+LDSGCSRHMTG+ +KF +L+
Subjt: MKATWDDSDESAS---GSDEEVAN-------------------FCFMAHSDKEDEQE--------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
Query: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIV--TSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQI
KDGG V FGDN KGKIIG I + + +S+ K+ V EE +L + +PK W SHPK+LI+G++E GV TRS + ++ NN+AF+SQI
Subjt: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIV--TSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQI
Query: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
EPK++ +A DE WILAMQEELNQFERNKVW L PRP + S+IGTKWVFRNK DE G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA
Subjt: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
Query: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDII
+KNF L+QMDVKSAFLNG+I EEVYVEQPPGFEN EFP+HV+KL KALYGLKQAPRAWY+RLS FLI F GKLDTTLF+ DML+VQIYVDDII
Subjt: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDII
Query: FGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYL
FGSTN +LC+EF+K M EFEMSMMGEL FFLGLQIKQ +DGIF+NQ KY DLLKRF K TPMS STKLDKDEKGK VD+K YRGMIGSLLYL
Subjt: FGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYL
Query: TASRPDIMFS
TASRPDIMFS
Subjt: TASRPDIMFS
|
|
| A0A2N9G3V4 CCHC-type domain-containing protein | 5.9e-173 | 64.71 | Show/hide |
Query: MKATWDDSDESAS---GSDEEVAN-------------------FCFMAHSDKEDEQE--------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
+K TWDDSDES S SD EVAN FC +A +D E E DEVCL S K KW+LDSGCSRHMTG+ +KF +L+
Subjt: MKATWDDSDESAS---GSDEEVAN-------------------FCFMAHSDKEDEQE--------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
Query: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIV--TSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQI
KDGG V FGDN KGKIIG I + + +S+ K+ V EE +L + +PK W SHPK+LI+G++E GV TRS + ++ NN+AF+SQI
Subjt: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIV--TSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQI
Query: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
EPK++ +A DE WILAMQEELNQFERNKVW L PRP + S+IGTKWVFRNK DE G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA
Subjt: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
Query: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDII
+KNF L+QMDVKSAFLNG+I EEVYVEQPPGFEN EFP+HV+KL KALYGLKQAPRAWY+RLS FLI F GKLDTTLF+ DML+VQIYVDDII
Subjt: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDII
Query: FGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYL
FGSTN +LC+EF+K M EFEMSMMGEL FFLGLQIKQ +DGIF+NQ KY DLLKRF K TPMS STKLDKDEKGK VD+K YRGMIGSLLYL
Subjt: FGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYL
Query: TASRPDIMFS
TASRPDIMFS
Subjt: TASRPDIMFS
|
|
| A0A2N9IDJ4 CCHC-type domain-containing protein | 6.5e-172 | 64.57 | Show/hide |
Query: MKATWDDSDESAS---GSDEEVAN-------------------FCFMAHSDKEDEQE--------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
+K TWDDSDES S SD EVAN FC +A +D E E DEVCL S K KW+LDSGCSRHMTG+ +KF +L+
Subjt: MKATWDDSDESAS---GSDEEVAN-------------------FCFMAHSDKEDEQE--------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
Query: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIVTSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEP
KDGG V FGDN KGKIIG +V D E EE +L + +PK W +HPK+LI+G++E GV TRS + ++ NN+AF+SQIEP
Subjt: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIVTSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEP
Query: KSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYK
K++ +A DE WILAMQEELNQFERNKVW L PRP + S+IGTKWVFRNK DE G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA +K
Subjt: KSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYK
Query: NFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFG
NF L+QMDVKSAFLNG+I EEVYVEQPPGFEN EFP+HV+KL KALYGLKQAPRAWY+RLS FLI F GKLDTTLF+ DML+VQIYVDDIIFG
Subjt: NFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFG
Query: STNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTA
STN +LC+EF+K M EFEMSMMGEL FFLGLQIKQ +DGIF+NQ KY DLLKRF K TPMS STKLDKDEKGK VD+K YRGMIGSLLYLTA
Subjt: STNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTA
Query: SRPDIMFS
SRPDIMFS
Subjt: SRPDIMFS
|
|
| A0A438H7V2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.6e-176 | 59.74 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT--------
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT--------
Query: ---------------------------------------------------IERNFGDLLVSDNGKEIVTSKE------------EMSLKEEGSSSMPKE
+E + G L + D ++ + ++ ++ E S +PK+
Subjt: ---------------------------------------------------IERNFGDLLVSDNGKEIVTSKE------------EMSLKEEGSSSMPKE
Query: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELVPRPSN S+IGTKWVFRNKMDENG I+R
Subjt: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
Query: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
NKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLKQAPRAWY+R
Subjt: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
Query: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
LS FL+ FKMGK+DTTLFIK KE DMLLVQIYVDDIIFG+TN SLCE+F+KCMHSEFEMSMMGEL++FLGLQIKQLK+G FINQ KY KDLLKRF
Subjt: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
Query: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM+S
Subjt: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
|
|
| A0A438IQK9 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-175 | 60.29 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT--------
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT--------
Query: ---------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSSMPKE
+E + G L + D ++ + KE+ L + E S +PK+
Subjt: ---------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSSMPKE
Query: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELVPRPSN S+IGTKWVFRNKMDENG I+R
Subjt: WRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMR
Query: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
NKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLKQAPRAWY+R
Subjt: NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDR
Query: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
LS FL+ FKMGK+DTTLFIK KE DMLLVQIYVDDIIFG+TN SLCE+F+KCMHSEFEMSMMGEL++FLGLQIKQLK+G FINQ KY KDLLKRF
Subjt: LSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFN
Query: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM S
Subjt: GGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLYLTASRPDIMFS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.9e-49 | 36.24 | Show/hide |
Query: WILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKS
W A+ ELN + N W + RP N +I+ ++WVF K +E GN +R KARLVA+G+ Q+ IDYEETFAPVAR+ + R +L+ N ++QMDVK+
Subjt: WILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKS
Query: AFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFI--KIKENDMLLVQIYVDDIIFGSTNPSLCEE
AFLNG + EE+Y+ P G +V KL KA+YGLKQA R W++ L +F +D ++I K N+ + V +YVDD++ + + +
Subjt: AFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFI--KIKENDMLLVQIYVDDIIFGSTNPSLCEE
Query: FAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKT-YRGMIGSLLY-LTASRPDI
F + + +F M+ + E+ F+G++I+ +D I+++Q Y K +L +F TP+ +K++ + D T R +IG L+Y + +RPD+
Subjt: FAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKT-YRGMIGSLLY-LTASRPDI
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-49 | 35.4 | Show/hide |
Query: EPKSLKDA----ENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLL
EP+SLK+ E ++ + AMQEE+ ++N ++LV P + KWVF+ K D + ++R KARLV +G+ Q++GID++E F+PV ++ +IR +L
Subjt: EPKSLKDA----ENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLL
Query: AFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIK-IKENDMLLVQIY
+ A+ + + Q+DVK+AFL+G + EE+Y+EQP GFE H V KL K+LYGLKQAPR WY + +F+ + D ++ K EN+ +++ +Y
Subjt: AFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIK-IKENDMLLVQIY
Query: VDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQI--KQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDK-------DEKGKSVD
VDD++ + L + + F+M +G LG++I ++ ++++QEKY + +L+RF K TP++ KL K +EKG
Subjt: VDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQI--KQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDK-------DEKGKSVD
Query: IKTYRGMIGSLLY-LTASRPDI
+ Y +GSL+Y + +RPDI
Subjt: IKTYRGMIGSLLY-LTASRPDI
|
|
| P25600 Putative transposon Ty5-1 protein YCL074W | 1.3e-23 | 31.03 | Show/hide |
Query: MDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSL
MDV +AFLN + E +YV+QPPGF N P +V++L +YGLKQAP W + ++N L F + + L+ + + + + +YVDD++ + +P +
Subjt: MDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDIIFGSTNPSL
Query: CEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDG-IFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLY-LTASRPD
+ + + + M +G++ FLGL I Q +G I ++ + Y + N K+ +TP+ S L + DI Y+ ++G LL+ RPD
Subjt: CEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDG-IFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLY-LTASRPD
Query: IMF
I +
Subjt: IMF
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-63 | 39.94 | Show/hide |
Query: LAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELV-PRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAI
++ ++ EP++ A DE W AM E+N N W+LV P PS+ +I+G +W+F K + +G++ R KARLVA+GY Q G+DY ETF+PV + +I
Subjt: LAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELV-PRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAI
Query: RMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLV
R++L A +++ + Q+DV +AFL G + ++VY+ QPPGF + + P++V KL+KALYGLKQAPRAWY L N+L+ F DT+LF+ + ++ +
Subjt: RMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLV
Query: QIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRG
+YVDDI+ +P+L + F + EL +FLG++ K++ G+ ++Q +Y DLL R K TPM+ S KL K D YRG
Subjt: QIYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRG
Query: MIGSLLYLTASRPDIMFS
++GSL YL +RPDI ++
Subjt: MIGSLLYLTASRPDIMFS
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-61 | 39.23 | Show/hide |
Query: EPKSLKDAENDEFWILAMQEELNQFERNKVWELV-PRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA
EP++ A D+ W AM E+N N W+LV P P + +I+G +W+F K + +G++ R KARLVA+GY Q G+DY ETF+PV + +IR++L A
Subjt: EPKSLKDAENDEFWILAMQEELNQFERNKVWELV-PRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA
Query: SYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDI
+++ + Q+DV +AFL G + +EVY+ QPPGF + + P +V +L+KA+YGLKQAPRAWY L +L+ F DT+LF+ + ++ + +YVDDI
Subjt: SYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYVDDI
Query: IFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLY
+ + L + + F + +L +FLG++ K++ G+ ++Q +YT DLL R K TPM+TS KL K D YRG++GSL Y
Subjt: IFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGSLLY
Query: LTASRPDIMFS
L +RPD+ ++
Subjt: LTASRPDIMFS
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 5.4e-62 | 41.4 | Show/hide |
Query: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
EP + +A+ W AM +E+ E WE+ P N IG KWV++ K + +G I R KARLVA+GY Q+EGID+ ETF+PV +L +++++LA ++
Subjt: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
Query: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEF----PHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYV
NF L+Q+D+ +AFLNG + EE+Y++ PPG+ + P+ V LKK++YGLKQA R W+ + S LIG F D T F+KI L V +YV
Subjt: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEF----PHHVYKLKKALYGLKQAPRAWYDRLSNFLIGNDFKMGKLDTTLFIKIKENDMLLVQIYV
Query: DDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGS
DDII S N + +E + S F++ +G L +FLGL+I + GI I Q KY DLL G K + PM S G VD K YR +IG
Subjt: DDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKTYRGMIGS
Query: LLYLTASRPDIMFS
L+YL +R DI F+
Subjt: LLYLTASRPDIMFS
|
|
| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.4e-12 | 34.17 | Show/hide |
Query: IYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEK---GKSVDIKTY
+YVDDI+ ++ +L + S F M +G + +FLG+QIK G+F++Q KY + +L N G + PMST L + K D +
Subjt: IYVDDIIFGSTNPSLCEEFAKCMHSEFEMSMMGELSFFLGLQIKQLKDGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEK---GKSVDIKTY
Query: RGMIGSLLYLTASRPDIMFS
R ++G+L YLT +RPDI ++
Subjt: RGMIGSLLYLTASRPDIMFS
|
|
| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 5.5e-22 | 46.72 | Show/hide |
Query: KTRSSINLFN---NLAFVSQI--EPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGI
++++ IN N +L + I EPKS+ A D W AMQEEL+ RNK W LVP P N +I+G KWVF+ K+ +G + R KARLVA+G+ QEEGI
Subjt: KTRSSINLFN---NLAFVSQI--EPKSLKDAENDEFWILAMQEELNQFERNKVWELVPRPSNTSIIGTKWVFRNKMDENGNIMRNKARLVAQGYCQEEGI
Query: DYEETFAPVARLEAIRMLLAFA
+ ET++PV R IR +L A
Subjt: DYEETFAPVARLEAIRMLLAFA
|
|
