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CmoCh14G002140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G002140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description(thale cress) hypothetical protein
Genome locationCmo_Chr14:968886..971461
RNA-Seq ExpressionCmoCh14G002140
SyntenyCmoCh14G002140
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD5322558.1 unnamed protein product [Arabidopsis thaliana]2.2e-2756.92Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK--------EILASFLAACSTVLFCIIPIRNCGFGMIKRFCLSNTTGKRR
        MEKYFGNAYRGDPGVPH D DRFVNIWIGSAAFS+LTW NPYMWQLSNQFK        E+  S L   + V+  II I      M    CLS+TTGK++
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK--------EILASFLAACSTVLFCIIPIRNCGFGMIKRFCLSNTTGKRR

Query:  VKRISLTSSSGISTWTSSTGIPIITTGPCT
         +R +L +SSGI  +   +G   ITTG  T
Subjt:  VKRISLTSSSGISTWTSSTGIPIITTGPCT
MBA0558445.1 hypothetical protein [Gossypium lobatum]5.6e-2350.68Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---
        MEKYFGNAYRGDPGVPH  PDRFVNIWIGSAAFS+LTW NPYMWQL+NQFK           + +FL     ACS V F ++   +  C +    MI   
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---

Query:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
           K+    N     KR  K  S    SG+STWT  TG  II+TG  T
Subjt:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
MBA0588026.1 hypothetical protein [Gossypium raimondii]5.6e-2350.68Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---
        MEKYFGNAYRGDPGVPH  PDRFVNIWIGSAAFS+LTW NPYMWQL+NQFK           + +FL     ACS V F ++   +  C +    MI   
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---

Query:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
           K+    N     KR  K  S    SG+STWT  TG  II+TG  T
Subjt:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
MBA0767874.1 hypothetical protein [Gossypium trilobum]1.3e-2456Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFKEILASFLAACSTVL--FCIIPIRNCGFGMIKRF-CLSNTTGKRRVKRIS
        MEKYFGNAYRGDPGVPH  PDRFVNIWIGSAAFS+LTW NPYMWQL+NQF             +L  F  IP  N G  + K    L     KR  K  S
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFKEILASFLAACSTVL--FCIIPIRNCGFGMIKRF-CLSNTTGKRRVKRIS

Query:  LTSSSGISTWTSSTGIPIITTGPCT
            SG+STWT  TG  II+TG  T
Subjt:  LTSSSGISTWTSSTGIPIITTGPCT
XP_027934959.1 uncharacterized protein LOC114190326 isoform X1 [Vigna unguiculata]9.2e-2653.79Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQF--KEILASFLAACSTVLFCIIPIRN-----CGFGMIKRFCLSNTTGKRRV
        MEKYFGNAYRGDPGVPH+DPDRFVNIWIGSA FS+LT+ NPYMW LSNQF         L       F ++P ++        GMIK+F  SN TG R+ 
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQF--KEILASFLAACSTVLFCIIPIRN-----CGFGMIKRFCLSNTTGKRRV

Query:  KRISLTSSSGISTWTSSTGIPIITTGPCTFLK
        +RISL SS G      +T     TTG  TFL+
Subjt:  KRISLTSSSGISTWTSSTGIPIITTGPCTFLK
TrEMBL top hitse value%identityAlignment
A0A7G2EL77 (thale cress) hypothetical protein1.1e-2756.92Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK--------EILASFLAACSTVLFCIIPIRNCGFGMIKRFCLSNTTGKRR
        MEKYFGNAYRGDPGVPH D DRFVNIWIGSAAFS+LTW NPYMWQLSNQFK        E+  S L   + V+  II I      M    CLS+TTGK++
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK--------EILASFLAACSTVLFCIIPIRNCGFGMIKRFCLSNTTGKRR

Query:  VKRISLTSSSGISTWTSSTGIPIITTGPCT
         +R +L +SSGI  +   +G   ITTG  T
Subjt:  VKRISLTSSSGISTWTSSTGIPIITTGPCT
A0A7J8M160 Uncharacterized protein2.7e-2350.68Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---
        MEKYFGNAYRGDPGVPH  PDRFVNIWIGSAAFS+LTW NPYMWQL+NQFK           + +FL     ACS V F ++   +  C +    MI   
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---

Query:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
           K+    N     KR  K  S    SG+STWT  TG  II+TG  T
Subjt:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
A0A7J8PFY2 Uncharacterized protein2.7e-2350.68Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---
        MEKYFGNAYRGDPGVPH  PDRFVNIWIGSAAFS+LTW NPYMWQL+NQFK           + +FL     ACS V F ++   +  C +    MI   
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---

Query:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
           K+    N     KR  K  S    SG+STWT  TG  II+TG  T
Subjt:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
A0A7J9E534 Uncharacterized protein6.5e-2556Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFKEILASFLAACSTVL--FCIIPIRNCGFGMIKRF-CLSNTTGKRRVKRIS
        MEKYFGNAYRGDPGVPH  PDRFVNIWIGSAAFS+LTW NPYMWQL+NQF             +L  F  IP  N G  + K    L     KR  K  S
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFKEILASFLAACSTVL--FCIIPIRNCGFGMIKRF-CLSNTTGKRRVKRIS

Query:  LTSSSGISTWTSSTGIPIITTGPCT
            SG+STWT  TG  II+TG  T
Subjt:  LTSSSGISTWTSSTGIPIITTGPCT
A0A7J9LHD3 Uncharacterized protein2.7e-2350.68Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---
        MEKYFGNAYRGDPGVPH  PDRFVNIWIGSAAFS+LTW NPYMWQL+NQFK           + +FL     ACS V F ++   +  C +    MI   
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFK---------EILASFL----AACSTVLFCII--PIRNCGF---GMI---

Query:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
           K+    N     KR  K  S    SG+STWT  TG  II+TG  T
Subjt:  ---KRFCLSNT--TGKRRVKRISLTSSSGISTWTSSTGIPIITTGPCT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09860.1 unknown protein2.4e-2492Show/hide
Query:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQF
        MEKYFGNAYRGDPGVPH D DRFVNIWIGSAAFS+LTW NPYMWQLSNQF
Subjt:  MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGTACTTCGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACACTGACCCAGATCGTTTTGTAAACATTTGGATTGGATCCGCCGCCTTCTCCATTCTCAC
ATGGAAGAATCCCTACATGTGGCAACTCTCCAATCAGTTCAAGGAGATATTGGCATCCTTTCTTGCTGCTTGTTCTACAGTTCTCTTTTGCATTATTCCCATTAGAAATT
GTGGGTTTGGCATGATAAAGCGTTTTTGTTTGAGCAATACCACTGGAAAAAGGCGCGTGAAAAGAATCAGCCTTACCAGTTCAAGTGGAATCAGTACATGGACAAGCTCC
ACCGGGATTCCTATTATTACAACTGGCCCGTGTACTTTCCTTAAGCTCTCGGACTATGTATGGTGGTCTGATTGTAAGATGATGCAGAAACCCAATGTATTTCTTAGCAC
AGCTTCAGCATTGATGTATTTGCAGACCCAGCCAATACTCATTGCTGGATCTGGGCAATCTTTTGGGCCTAAAGCTTTATCTGTTGCCATGTTTAAAAGAACTGTCGCCT
CCTCTTGA
mRNA sequenceShow/hide mRNA sequence
CAAGACCAGAAAGAAGCCGTGATTCTGAGAAATCGAAGCAAGAGAGGCGAAGAAATGGAGAAGTACTTCGGAAATGCTTACAGAGGCGACCCTGGAGTTCCACACACTGA
CCCAGATCGTTTTGTAAACATTTGGATTGGATCCGCCGCCTTCTCCATTCTCACATGGAAGAATCCCTACATGTGGCAACTCTCCAATCAGTTCAAGGAGATATTGGCAT
CCTTTCTTGCTGCTTGTTCTACAGTTCTCTTTTGCATTATTCCCATTAGAAATTGTGGGTTTGGCATGATAAAGCGTTTTTGTTTGAGCAATACCACTGGAAAAAGGCGC
GTGAAAAGAATCAGCCTTACCAGTTCAAGTGGAATCAGTACATGGACAAGCTCCACCGGGATTCCTATTATTACAACTGGCCCGTGTACTTTCCTTAAGCTCTCGGACTA
TGTATGGTGGTCTGATTGTAAGATGATGCAGAAACCCAATGTATTTCTTAGCACAGCTTCAGCATTGATGTATTTGCAGACCCAGCCAATACTCATTGCTGGATCTGGGC
AATCTTTTGGGCCTAAAGCTTTATCTGTTGCCATGTTTAAAAGAACTGTCGCCTCCTCTTGAAGCCCATCCTCAATTCTGCCTTCCAAAGTAAAAGCATCTTCTTCATTC
CAAAAGATTACTTGTGCCACACCAAAATCCCACCTGAAGGAAGATCTGTTTGAGTTAAAGATGGG
Protein sequenceShow/hide protein sequence
MEKYFGNAYRGDPGVPHTDPDRFVNIWIGSAAFSILTWKNPYMWQLSNQFKEILASFLAACSTVLFCIIPIRNCGFGMIKRFCLSNTTGKRRVKRISLTSSSGISTWTSS
TGIPIITTGPCTFLKLSDYVWWSDCKMMQKPNVFLSTASALMYLQTQPILIAGSGQSFGPKALSVAMFKRTVASS