; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G002290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G002290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSplicing factor 3A subunit 2
Genome locationCmo_Chr14:1050999..1052391
RNA-Seq ExpressionCmoCh14G002290
SyntenyCmoCh14G002290
Gene Ontology termsGO:0000245 - spliceosomal complex assembly (biological process)
GO:0005686 - U2 snRNP (cellular component)
GO:0071004 - U2-type prespliceosome (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043971.1 splicing factor 3A subunit 2 [Cucumis melo var. makuwa]1.9e-7767.84Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LAKRAA EAKEA AQPQPHKRKVS+RKTG L      LFKIGRPGYRVTKQFDSETKQRS LF                      QRVQPFDK+YQYLLF
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP
        AAEPYEIIAF           KV   ++      F+       +   LQLYFKSKPQ      PVPAANGTV         PPPPQAPPPPPPPPQQG P
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP

Query:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        PRV PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPG+ +N PPMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

KAG6580632.1 hypothetical protein SDJN03_20634, partial [Cucurbita argyrosperma subsp. sororia]2.8e-8173.08Show/hide
Query:  MRVITWRIRRGSGIRLILAKRAAHEAKEASA--QPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAE
        MRVITWRIRRGSGIRLILAKRAAHEAKEASA  QPQPHKRKVSIRKT           KIGRPGYRVTKQFDSETKQRSWLF                  
Subjt:  MRVITWRIRRGSGIRLILAKRAAHEAKEASA--QPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAE

Query:  PYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGP
                                               QLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGP
Subjt:  PYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGP

Query:  PRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        PRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  PRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

XP_004137848.1 splicing factor 3A subunit 2 [Cucumis sativus]8.0e-7666.43Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LAKRAA EAKEA AQPQPHKRKVS+RKT           KIGRPGYRVTKQFDSETKQRS LF                      QRVQPFDK+YQYLLF
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP
        AAEPYEIIAF           KV   ++      F+       +   LQLYFKSKPQ      PVPAANGTV         PPPPQAPPPPPPPPQQG P
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP

Query:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        PRV PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPP+GNNTMANFTPG+ +N PPMPPPPQGFPGQG+RQPPPPPPNMG
Subjt:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

XP_022934763.1 formin-like protein 20 isoform X1 [Cucurbita moschata]8.8e-8373.64Show/hide
Query:  MRVITWRIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAEPY
        MRVITWRIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKT           KIGRPGYRVTKQFDSETKQRSWLF                    
Subjt:  MRVITWRIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAEPY

Query:  EIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPR
                                             QLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPR
Subjt:  EIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPR

Query:  PMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        PMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  PMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

XP_022934764.1 formin-like protein 20 isoform X2 [Cucurbita moschata]6.5e-7872.22Show/hide
Query:  RIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAEPYEIIAFV
        R+ RGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKT           KIGRPGYRVTKQFDSETKQRSWLF                          
Subjt:  RIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAEPYEIIAFV

Query:  QGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPRPMPPGG
                                       QLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPRPMPPGG
Subjt:  QGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPRPMPPGG

Query:  APPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        APPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  APPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

TrEMBL top hitse value%identityAlignment
A0A0A0LEB1 Matrin-type domain-containing protein3.9e-7666.43Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LAKRAA EAKEA AQPQPHKRKVS+RKT           KIGRPGYRVTKQFDSETKQRS LF                      QRVQPFDK+YQYLLF
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP
        AAEPYEIIAF           KV   ++      F+       +   LQLYFKSKPQ      PVPAANGTV         PPPPQAPPPPPPPPQQG P
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP

Query:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        PRV PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPP+GNNTMANFTPG+ +N PPMPPPPQGFPGQG+RQPPPPPPNMG
Subjt:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

A0A5A7TQW8 Splicing factor 3A subunit 29.2e-7867.84Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LAKRAA EAKEA AQPQPHKRKVS+RKTG L      LFKIGRPGYRVTKQFDSETKQRS LF                      QRVQPFDK+YQYLLF
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP
        AAEPYEIIAF           KV   ++      F+       +   LQLYFKSKPQ      PVPAANGTV         PPPPQAPPPPPPPPQQG P
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP

Query:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        PRV PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPG+ +N PPMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

A0A5D3DPC7 Splicing factor 3A subunit 21.5e-7566.43Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LAKRAA EAKEA AQPQPHKRKVS+RKT           KIGRPGYRVTKQFDSETKQRS LF                      QRVQPFDK+YQYLLF
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP
        AAEPYEIIAF           KV   ++      F+       +   LQLYFKSKPQ      PVPAANGTV         PPPPQAPPPPPPPPQQG P
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFKSKPQ------PVPAANGTV---------PPPPQAPPPPPPPPQQGVP

Query:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        PRV PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPG+ +N PPMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  PRV-PPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

A0A6J1F3I1 formin-like protein 20 isoform X23.2e-7872.22Show/hide
Query:  RIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAEPYEIIAFV
        R+ RGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKT           KIGRPGYRVTKQFDSETKQRSWLF                          
Subjt:  RIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAEPYEIIAFV

Query:  QGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPRPMPPGG
                                       QLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPRPMPPGG
Subjt:  QGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPRPMPPGG

Query:  APPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        APPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  APPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

A0A6J1F8K3 formin-like protein 20 isoform X14.2e-8373.64Show/hide
Query:  MRVITWRIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAEPY
        MRVITWRIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKT           KIGRPGYRVTKQFDSETKQRSWLF                    
Subjt:  MRVITWRIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAEPY

Query:  EIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPR
                                             QLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPR
Subjt:  EIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPR

Query:  PMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
        PMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  PMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG

SwissProt top hitse value%identityAlignment
A5PJN8 Splicing factor 3A subunit 22.8e-1538.85Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LA+RAA EAKEA AQP P K KV ++K            KIGRPGY+VTKQ D+E  Q+S LF                      QR++P D+++QYLL 
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQH-ENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVM
        AAEPYE IA      F + + +++  +   K  T + +  +   LQ +FK +  P P    ++P  P     PPPP   G+PPR  PP+P SLPPPP   
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQH-ENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVM

Query:  ANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGF--PGQGVRQPPP
           PP P P G AP  PP PP     +    PG     P + PP  G   P  GV  P P
Subjt:  ANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGF--PGQGVRQPPP

Q15428 Splicing factor 3A subunit 21.4e-1439.18Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LA+RAA EAKEA AQP P K KV ++K            KIGRPGY+VTKQ DSE  Q+S LF                      QR++P D+++QYLL 
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQH-ENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVM
        AAEPYE IA      F + + +++  +   K  T + +  +   LQ +FK +  P P    ++P  P     PPPP   G+PPR  PP+P SLPPPP   
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQH-ENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVM

Query:  ANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGF--PGQGVRQPPP--PPPNMG
           PP P P G AP  PP PP     +    PG     P + PP  G   P  GV  P P   PP  G
Subjt:  ANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGF--PGQGVRQPPP--PPPNMG

Q62203 Splicing factor 3A subunit 21.8e-1438.95Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LA+RAA EAKEA AQP P + KV ++K            KIGRPGY+VTKQ D+E  Q+S LF                      QR++P D+++QYLL 
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMA
        AAEPYE IAF           KV   ++      F+       LQ +FK +  P P    ++P  P     PPPP   G+PPR  PP+P +LPPPP    
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMA

Query:  NGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGF--PGQGVRQPPP--PPPNMG
          PP P P G AP  PP PP     M    PG     P + PP  G   P  GV  P P   PP  G
Subjt:  NGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGF--PGQGVRQPPP--PPPNMG

Q6AXT8 Splicing factor 3A subunit 21.1e-1438.81Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LA+RAA EAKEA AQP P K KV ++K            KIGRPGY+VTKQ D+E  Q+S LF                      QR++P D+++QYLL 
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQH-ENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVM
        AAEPYE IA      F + + +++  +   K  T + +  +   LQ +FK +  P P    ++P  P     PPPP   G+PPR  PP+P +LPPPP   
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYIQH-ENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVM

Query:  ANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGF--PGQGVRQPPP--PPPNMG
           PP P P G AP  PP PP     M    PG     P + PP  G   P  GV  P P   PP  G
Subjt:  ANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGSLVNGPPMPPPPQGF--PGQGVRQPPP--PPPNMG

Q9FLQ7 Formin-like protein 202.0e-0547.66Show/hide
Query:  PQPVPAANGTVPPPP-------QAPPPPPPPPQQGVPPRVPPPMP--GSLPPPP----SVMANGPPRPMPP---GGAPPIPPPPPVGNNTMANFTPGSLV
        P P P + G+ PPPP         PPPPPPPP  G PP  PPP P  GS PPPP    S +++ PP P PP   GGAPP PPPPP+         P  + 
Subjt:  PQPVPAANGTVPPPP-------QAPPPPPPPPQQGVPPRVPPPMP--GSLPPPP----SVMANGPPRPMPP---GGAPPIPPPPPVGNNTMANFTPGSLV

Query:  NGPPMPPPPQGFPGQGVRQPPPPPPNMG
         G P PPPP   P  G   PPPPPP  G
Subjt:  NGPPMPPPPQGFPGQGVRQPPPPPPNMG

Arabidopsis top hitse value%identityAlignment
AT1G61080.1 Hydroxyproline-rich glycoprotein family protein4.6e-0544.2Show/hide
Query:  PQPVPAA----NGTVPPPP---------QAPPPPPPPPQQGVPPRVPPPMPGSL------PPPPSVMANGPPRPMPP-GGAPPIPPPPPVGNNTMANFTP
        P P P A     G+ PPPP          APPPPPPPP+  V P  PPP PG+       PPPP   A  PP P PP     P PPP P+GN+      P
Subjt:  PQPVPAA----NGTVPPPP---------QAPPPPPPPPQQGVPPRVPPPMPGSL------PPPPSVMANGPPRPMPP-GGAPPIPPPPPVGNNTMANFTP

Query:  G----SLVNG--PPMPPPPQGFPGQGVRQPPPPPPNMG
              L NG  PP PPPP      G   PPPPPP MG
Subjt:  G----SLVNG--PPMPPPPQGFPGQGVRQPPPPPPNMG

AT2G32600.1 hydroxyproline-rich glycoprotein family protein5.0e-2846.15Show/hide
Query:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF
        LAKRAA EAK+A  +PQP KR VS+R+T           KIGRPGYRVTKQ+D E +QRS LF                      Q+VQP+DK YQYLLF
Subjt:  LAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLF----------------------QRVQPFDKKYQYLLF

Query:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFK------SKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPG
        AAEPYEIIAF           KV   ++      F+       +   LQ+YFK      +KPQ    ANG        PPPPPPPP Q  PP  PPP  G
Subjt:  AAEPYEIIAFVQGIIFNLVNNKVNGFQLSSKLLTFYI----QHENLQLQLYFK------SKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPG

Query:  SLPPPPSVMANGPPRPMPPGG
          PPPP  MAN   RPMPP G
Subjt:  SLPPPPSVMANGPPRPMPPGG

AT5G07740.1 actin binding1.4e-0647.66Show/hide
Query:  PQPVPAANGTVPPPP-------QAPPPPPPPPQQGVPPRVPPPMP--GSLPPPP----SVMANGPPRPMPP---GGAPPIPPPPPVGNNTMANFTPGSLV
        P P P + G+ PPPP         PPPPPPPP  G PP  PPP P  GS PPPP    S +++ PP P PP   GGAPP PPPPP+         P  + 
Subjt:  PQPVPAANGTVPPPP-------QAPPPPPPPPQQGVPPRVPPPMP--GSLPPPP----SVMANGPPRPMPP---GGAPPIPPPPPVGNNTMANFTPGSLV

Query:  NGPPMPPPPQGFPGQGVRQPPPPPPNMG
         G P PPPP   P  G   PPPPPP  G
Subjt:  NGPPMPPPPQGFPGQGVRQPPPPPPNMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGTAATTACTTGGCGCATACGCAGGGGAAGCGGCATCAGACTAATTTTGGCTAAGAGAGCTGCCCATGAAGCCAAGGAGGCTTCTGCTCAACCTCAACCCCACAA
GCGGAAGGTCTCTATTCGCAAAACAGGCAAGCTTTATTCATTTTTTATTAGATTGTTTAAAATTGGTCGGCCTGGTTATCGAGTAACAAAGCAATTTGATTCTGAGACAA
AACAGAGATCTTGGCTTTTTCAGCGGGTGCAACCTTTTGATAAAAAGTACCAATATCTTCTGTTTGCAGCTGAACCATATGAAATAATTGCATTTGTTCAAGGTATTATA
TTTAATCTTGTTAACAACAAAGTAAATGGCTTCCAACTTTCAAGCAAACTTTTAACTTTTTATATTCAACATGAAAATTTGCAGTTGCAGTTGTATTTCAAATCCAAGCC
ACAACCTGTGCCTGCAGCCAACGGAACAGTGCCGCCACCACCACAAGCTCCACCGCCACCGCCACCTCCACCCCAGCAAGGTGTACCACCTAGAGTTCCTCCTCCGATGC
CTGGATCCTTGCCACCTCCCCCATCTGTAATGGCCAATGGTCCTCCCAGGCCAATGCCTCCTGGTGGAGCTCCGCCGATACCCCCACCGCCTCCAGTTGGTAATAACACA
ATGGCAAATTTCACTCCTGGTTCTCTGGTGAATGGACCACCCATGCCGCCGCCTCCACAGGGCTTCCCAGGCCAGGGTGTCCGGCAGCCGCCACCACCGCCACCCAATAT
GGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGTAATTACTTGGCGCATACGCAGGGGAAGCGGCATCAGACTAATTTTGGCTAAGAGAGCTGCCCATGAAGCCAAGGAGGCTTCTGCTCAACCTCAACCCCACAA
GCGGAAGGTCTCTATTCGCAAAACAGGCAAGCTTTATTCATTTTTTATTAGATTGTTTAAAATTGGTCGGCCTGGTTATCGAGTAACAAAGCAATTTGATTCTGAGACAA
AACAGAGATCTTGGCTTTTTCAGCGGGTGCAACCTTTTGATAAAAAGTACCAATATCTTCTGTTTGCAGCTGAACCATATGAAATAATTGCATTTGTTCAAGGTATTATA
TTTAATCTTGTTAACAACAAAGTAAATGGCTTCCAACTTTCAAGCAAACTTTTAACTTTTTATATTCAACATGAAAATTTGCAGTTGCAGTTGTATTTCAAATCCAAGCC
ACAACCTGTGCCTGCAGCCAACGGAACAGTGCCGCCACCACCACAAGCTCCACCGCCACCGCCACCTCCACCCCAGCAAGGTGTACCACCTAGAGTTCCTCCTCCGATGC
CTGGATCCTTGCCACCTCCCCCATCTGTAATGGCCAATGGTCCTCCCAGGCCAATGCCTCCTGGTGGAGCTCCGCCGATACCCCCACCGCCTCCAGTTGGTAATAACACA
ATGGCAAATTTCACTCCTGGTTCTCTGGTGAATGGACCACCCATGCCGCCGCCTCCACAGGGCTTCCCAGGCCAGGGTGTCCGGCAGCCGCCACCACCGCCACCCAATAT
GGGATAG
Protein sequenceShow/hide protein sequence
MRVITWRIRRGSGIRLILAKRAAHEAKEASAQPQPHKRKVSIRKTGKLYSFFIRLFKIGRPGYRVTKQFDSETKQRSWLFQRVQPFDKKYQYLLFAAEPYEIIAFVQGII
FNLVNNKVNGFQLSSKLLTFYIQHENLQLQLYFKSKPQPVPAANGTVPPPPQAPPPPPPPPQQGVPPRVPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNT
MANFTPGSLVNGPPMPPPPQGFPGQGVRQPPPPPPNMG