CuGenDBv2

Gene ID	CmoCh14G003250
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Embryo defective
Genome location	Cmo_Chr14:1499444..1502790
RNA-Seq Expression	CmoCh14G003250
Synteny	CmoCh14G003250
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7017475.1 hypothetical protein SDJN02_19340 [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-80

99.38

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYK+EESENKKNSAKSAPKEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
        MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

XP_022144745.1 uncharacterized protein LOC111014361 [Momordica charantia]

5.1e-73

89.38

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MK RIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK N+AKSA KEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
        +AARGGMETLKPALQRVYMT+ASAYRDALKNFIDGYQEG+QQVMEKK+ SDS+KGS+K+K
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

XP_022934670.1 uncharacterized protein LOC111441792 [Cucurbita moschata]

1.5e-80

100

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
        MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

XP_022983134.1 uncharacterized protein LOC111481775 [Cucurbita maxima]

1.5e-77

96.25

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTW ERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSA+SAPKEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
        +AARGGMETLKPALQRVYMTKAS YRDALKNFIDGYQEGIQQVMEKK+ISDS+KGSEKMK
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

XP_023522298.1 uncharacterized protein LOC111786187 [Cucurbita pepo subsp. pepo]

1.1e-78

97.5

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTW ERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
        +AARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKK+ISDS+KGSEKMK
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEN2 Uncharacterized protein

3.0e-71

89.31

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MKA+IVLRKIYDYVRYDLKEIAFPSSLPDPPH KKR KL+W ERFLVLKEASRLYAASWVRDIGPELRP DYKV+ESENK NS K APKEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKM
        +AARGGMETLKPALQRVYMT+ASAYRDALKNFIDGYQEGIQQVMEKK  SDS+KGS+K+
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKM

A0A1S3B6Q8 uncharacterized protein LOC103486641

1.1e-70

88.05

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MKA+IV RKIYDYVRYDLKEIAFPSSLPDPPH KKR KLTW +RFLVLKEASRLYAASWVRDIGPELRP++YKVEESENK NS KSAPKEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKM
        +AARGGMETLKPALQRVYMT+A+AYRDALK FIDGYQEGIQQVMEKK  SDS+KGS+K+
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKM

A0A6J1CSI2 uncharacterized protein LOC111014361

2.5e-73

89.38

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MK RIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK N+AKSA KEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
        +AARGGMETLKPALQRVYMT+ASAYRDALKNFIDGYQEG+QQVMEKK+ SDS+KGS+K+K
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

A0A6J1F8D8 uncharacterized protein LOC111441792

7.2e-81

100

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
        MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

A0A6J1J6G3 uncharacterized protein LOC111481775

7.4e-78

96.25

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTW ERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSA+SAPKEKEPSTLEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK
        +AARGGMETLKPALQRVYMTKAS YRDALKNFIDGYQEGIQQVMEKK+ISDS+KGSEKMK
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G06240.1 embryo defective 2735

1.9e-54

70.39

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Query:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA
        MK ++V RK+ DY+ YDLKEI  PSSLPDPPH  KRRKLTW ERFLVLKEASRLYAASWVRDIGPELRPNDYK +     K  AK A  E EPS LEDLA
Subjt:  MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLA

Query:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDS
        +AARGGMETL+PAL R+YMT+AS Y+DAL +FI GY EG+QQVM+ K  S++
Subjt:  MAARGGMETLKPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGGCGAGGATCGTTTTAAGGAAGATTTATGACTACGTTCGGTATGATTTGAAGGAAATTGCATTTCCTTCGTCGCTGCCAGATCCTCCGCATTCAAAGAAGCGTCG
AAAGCTTACATGGCGTGAACGATTCTTGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCAAGCTGGGTGCGGGACATTGGTCCTGAACTGCGACCAAATGACTATAAGG
TGGAAGAAAGCGAAAACAAAAAGAATTCAGCAAAAAGTGCACCTAAGGAGAAAGAACCTTCAACACTGGAAGATCTGGCCATGGCTGCAAGAGGAGGAATGGAAACATTA
AAACCAGCTTTGCAGCGGGTGTATATGACTAAAGCTTCTGCATATAGAGACGCTCTGAAAAATTTTATAGATGGCTATCAAGAAGGTATTCAGCAAGTCATGGAGAAAAA
GAAAATTTCTGATTCCGAGAAGGGAAGCGAAAAAATGAAATAA

mRNA sequence

Show/hide mRNA sequence

GGAATTTCCATTTCCCTCTTTTTCTCTGAATGAAGTTTCGAGCCAATTTCTTGTTGGAACACAAGCTTGGAGCAGCAAATGCATGGAATGGTGAAGTATAAGTCAGCTAA
TCTGTAGCAGGAATGAAGGCGAGGATCGTTTTAAGGAAGATTTATGACTACGTTCGGTATGATTTGAAGGAAATTGCATTTCCTTCGTCGCTGCCAGATCCTCCGCATTC
AAAGAAGCGTCGAAAGCTTACATGGCGTGAACGATTCTTGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCAAGCTGGGTGCGGGACATTGGTCCTGAACTGCGACCAA
ATGACTATAAGGTGGAAGAAAGCGAAAACAAAAAGAATTCAGCAAAAAGTGCACCTAAGGAGAAAGAACCTTCAACACTGGAAGATCTGGCCATGGCTGCAAGAGGAGGA
ATGGAAACATTAAAACCAGCTTTGCAGCGGGTGTATATGACTAAAGCTTCTGCATATAGAGACGCTCTGAAAAATTTTATAGATGGCTATCAAGAAGGTATTCAGCAAGT
CATGGAGAAAAAGAAAATTTCTGATTCCGAGAAGGGAAGCGAAAAAATGAAATAAAAATTTCTGATCGTATTGATGTTTTATGTAAAAGCTACAGAATTGTGACTACACT
AGTTTAGAGGATTGGGCAGCTCAATTTCTAGTTCTAAAAATTGGTTTAGATTTTTTGTGTCGTTTGCGCGGTGCAATTTGAAATTCATACTGTTTTAAGCACCACCTATT
TATTCACACGAACACACGCGGTCATAAGAAAGGGTAGCAAATTCAACCTTTATGTTCCCTAAAGAACTAGTTGCATGATTTTTTTTTAATTTTATTATTATTATTATTTC
CCCTACTATTGTCAGTTATTTTGGAGTTCTTAGTGACTTAAATTGCTTACAAGGCATGGAGATATTAGTGTGAAGGAAGCTGTTTTTGG

Protein sequence

Show/hide protein sequence

MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWVRDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETL
KPALQRVYMTKASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKMK

CmoCh14G003250 (gene) of Cucurbita moschata (Rifu) v1 genome