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CmoCh14G003460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G003460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr14:1583886..1584383
RNA-Seq ExpressionCmoCh14G003460
SyntenyCmoCh14G003460
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580738.1 hypothetical protein SDJN03_20740, partial [Cucurbita argyrosperma subsp. sororia]4.8e-8293.33Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ
        MDGGLNKIVP++IALFLLTFLLL+AQILYLLSRRRHQHGAA+ NEKCF FFCWRNQLRIEPKEI  ISKTHHNFE  AAAVVVE+WQELGGPSRTLFTIQ
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ

Query:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
        EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
Subjt:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH

KAG7017491.1 hypothetical protein SDJN02_19356, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-8193.33Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ
        MDGGLNKIVP+LIALFLLTFLLL+AQILYLLSRRRHQHGAA+ NEKCF FFCWRNQLRIEPKEI  ISKTHHNFE  AAAVVVE+WQELGGPSRTLFTIQ
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ

Query:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
        EEEESEGIESSSTMSF TPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
Subjt:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH

XP_022935266.1 uncharacterized protein LOC111442204 [Cucurbita moschata]1.8e-89100Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ
        MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ

Query:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
        EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
Subjt:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH

XP_022983133.1 uncharacterized protein LOC111481774 [Cucurbita maxima]7.8e-7789.7Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ
        MDGGLNKIVPVLIALFLLTFLLL+AQILYLLSRRRHQH AA+PN+KCFY FCWRNQ RI+PKEIA ISKTHHNFE  AAAVVVEEWQELGGPSRTLFTIQ
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ

Query:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
        EEEESEG ESSSTM+FHTPCGSPA YFTPSP  SPTR+AGNFPVDGDCWDHNRTTPFLA+EISSH
Subjt:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH

XP_023528874.1 uncharacterized protein LOC111791670 [Cucurbita pepo subsp. pepo]1.9e-8395.76Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ
        MDGGLNKIVPVLIALFLLTFLLL+AQILYLL RRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFE  AAAVVVEEWQELGGPSRTLFTIQ
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ

Query:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
        EEEESEGIESSSTMSFHTPCGSPAYYFTPSP  SPTR+AGNFPVDGDCWDHNRTTPFLAIEISSH
Subjt:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH

TrEMBL top hitse value%identityAlignment
A0A1S4DUG3 uncharacterized protein LOC1034866691.5e-3653.19Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRR--HQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVE-------EWQELGG
        MDGGLNKI   LI LFL  F  L+AQILY+L RRR   + G  +PN+KCFY F WRNQ RI+PKEI  ISK   +    A  VVVE       +WQEL G
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRR--HQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVE-------EWQELGG

Query:  PSRTLFTIQEEEESEGI--------------ESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
        PSRTLFTI+EEEE EGI                  T  FHTPC SP Y    +PSSSP+RD   FP D  C D N TTPF AI+I++H
Subjt:  PSRTLFTIQEEEESEGI--------------ESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH

A0A5A7TPT7 Uncharacterized protein1.5e-3653.19Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRR--HQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVE-------EWQELGG
        MDGGLNKI   LI LFL  F  L+AQILY+L RRR   + G  +PN+KCFY F WRNQ RI+PKEI  ISK   +    A  VVVE       +WQEL G
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRR--HQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVE-------EWQELGG

Query:  PSRTLFTIQEEEESEGI--------------ESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
        PSRTLFTI+EEEE EGI                  T  FHTPC SP Y    +PSSSP+RD   FP D  C D N TTPF AI+I++H
Subjt:  PSRTLFTIQEEEESEGI--------------ESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH

A0A6J1F429 uncharacterized protein LOC1114422048.7e-90100Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ
        MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ

Query:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
        EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
Subjt:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH

A0A6J1J6W6 uncharacterized protein LOC1114817743.8e-7789.7Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ
        MDGGLNKIVPVLIALFLLTFLLL+AQILYLLSRRRHQH AA+PN+KCFY FCWRNQ RI+PKEIA ISKTHHNFE  AAAVVVEEWQELGGPSRTLFTIQ
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQ

Query:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH
        EEEESEG ESSSTM+FHTPCGSPA YFTPSP  SPTR+AGNFPVDGDCWDHNRTTPFLA+EISSH
Subjt:  EEEESEGIESSSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH

A0A6J1L0U5 uncharacterized protein LOC1114988291.5e-3352.57Show/hide
Query:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVV---VEEWQELGGPSRTLF
        MDGGL KI   LI+LF +TFLLL+AQIL+  SR RH      P + C Y FCWR + RIEP EIA  SK H +   A  A V   +E+W+ L GPSR LF
Subjt:  MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVV---VEEWQELGGPSRTLF

Query:  TI-QEEEESEGIESS--------STMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEIS
        TI +EEEE EG+ES          T  F+TPCGSP  +FTP    SPT DA +FPV  D  D +RT  FLAIEI+
Subjt:  TI-QEEEESEGIESS--------STMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCGGTTTGAACAAGATCGTCCCCGTACTCATCGCCCTCTTCCTACTCACTTTCCTACTTCTCATCGCTCAGATCCTCTACCTTCTCTCGCGACGGCGCCACCA
ACACGGCGCCGCCGATCCCAATGAAAAATGCTTCTACTTTTTCTGTTGGAGGAACCAATTGCGGATAGAACCAAAGGAAATCGCGTGCATTTCAAAAACCCACCATAATT
TCGAAGCGGCGGCGGCGGCGGTGGTGGTGGAGGAGTGGCAGGAGCTGGGCGGACCGTCGAGAACGCTTTTCACTATCCAGGAAGAGGAGGAGAGTGAAGGAATCGAATCT
TCGAGTACGATGTCGTTTCATACGCCCTGTGGTTCTCCTGCCTACTACTTCACCCCGTCGCCGTCATCGTCGCCTACTCGTGACGCCGGCAACTTTCCGGTGGATGGTGA
TTGTTGGGACCACAATCGAACGACGCCGTTTTTGGCTATTGAAATTAGCAGCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCGGTTTGAACAAGATCGTCCCCGTACTCATCGCCCTCTTCCTACTCACTTTCCTACTTCTCATCGCTCAGATCCTCTACCTTCTCTCGCGACGGCGCCACCA
ACACGGCGCCGCCGATCCCAATGAAAAATGCTTCTACTTTTTCTGTTGGAGGAACCAATTGCGGATAGAACCAAAGGAAATCGCGTGCATTTCAAAAACCCACCATAATT
TCGAAGCGGCGGCGGCGGCGGTGGTGGTGGAGGAGTGGCAGGAGCTGGGCGGACCGTCGAGAACGCTTTTCACTATCCAGGAAGAGGAGGAGAGTGAAGGAATCGAATCT
TCGAGTACGATGTCGTTTCATACGCCCTGTGGTTCTCCTGCCTACTACTTCACCCCGTCGCCGTCATCGTCGCCTACTCGTGACGCCGGCAACTTTCCGGTGGATGGTGA
TTGTTGGGACCACAATCGAACGACGCCGTTTTTGGCTATTGAAATTAGCAGCCACTGA
Protein sequenceShow/hide protein sequence
MDGGLNKIVPVLIALFLLTFLLLIAQILYLLSRRRHQHGAADPNEKCFYFFCWRNQLRIEPKEIACISKTHHNFEAAAAAVVVEEWQELGGPSRTLFTIQEEEESEGIES
SSTMSFHTPCGSPAYYFTPSPSSSPTRDAGNFPVDGDCWDHNRTTPFLAIEISSH