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CmoCh14G003480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G003480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRegulatory particle non-ATPase 10
Genome locationCmo_Chr14:1589717..1590811
RNA-Seq ExpressionCmoCh14G003480
SyntenyCmoCh14G003480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KZM99200.1 hypothetical protein DCAR_013438 [Daucus carota subsp. sativus]3.6e-2148.32Show/hide
Query:  HVELIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGR
        H+ +IPT  + SNFP+ P ++ D Q+      +L Q      R+RD GA ++R P     +ALV   D    SDLL PV G  VE+ VVDSD AVGV+G 
Subjt:  HVELIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGR

Query:  DSEEEIGGQETGDAG-VEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED
        D + E+GG+E GD G VEGVDG VLE E+GL G E+GPD E+ EE +E+
Subjt:  DSEEEIGGQETGDAG-VEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED

KZV15914.1 hypothetical protein F511_29086 [Dorcoceras hygrometricum]4.8e-1843.92Show/hide
Query:  VELIPTTDKVSNFPTDPPLNSDKQRQRSDVTI-LIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGR
        +++IPT     +FP     N D+      V + L +C +   R+RD  A DER PY + L+ALV  RD+ VE DLLV V G +V++ VVD+D+ VGVAG 
Subjt:  VELIPTTDKVSNFPTDPPLNSDKQRQRSDVTI-LIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGR

Query:  DSEEEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED
        D + + GG++ G   VE  DG VLE ESG  G EDGP  ++ E+++ED
Subjt:  DSEEEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED

PON70095.1 hypothetical protein PanWU01x14_082700 [Parasponia andersonii]1.3e-1543.26Show/hide
Query:  LIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSE
        ++   D+ ++ PT P +N + +   +   +L Q    +  + D  A ++R P  N L+ALV  RD     DLLV V    VE  VVD D  VGVA  D  
Subjt:  LIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSE

Query:  EEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEE
         E+GGQE GD GVEGVDGDVLE ESGL G + GP YE+ ++
Subjt:  EEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEE

RXH76386.1 hypothetical protein DVH24_019274 [Malus domestica]5.2e-2046.53Show/hide
Query:  LIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSE
        ++PT D+ ++ P DP ++ D+Q+ R  + +L Q       + D GA DER P  + L+ALV  RDER E DLL  V    VE  VVD+D  V V+G D +
Subjt:  LIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSE

Query:  EEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEE
         E GG++ G  GVE  DGDVLE+E+GLGG EDGP  ED ++E+E
Subjt:  EEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEE

RXH81415.1 hypothetical protein DVH24_034836 [Malus domestica]2.2e-1541.67Show/hide
Query:  LIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSE
        ++PT  + ++F  DP +  D+ + R  + +L +       + D GA D+R P  + L+ALV  RDER E DLL  V G  V++ VVD++  V V+G D +
Subjt:  LIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSE

Query:  EEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEE
         E GG++ GD GVE  D DVLE+E+GLG  ED P  E+ +EE+E
Subjt:  EEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEE

TrEMBL top hitse value%identityAlignment
A0A0A0LE53 Uncharacterized protein1.7e-4064.43Show/hide
Query:  VHVELIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAG
        + VEL+P +D+ S+ P++  +N D++ Q S V +LIQ R DEGR+R GGAGDERGPY + LMALV+ RD+  ESDLLV V G  VE  VVDSD+AV VAG
Subjt:  VHVELIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAG

Query:  RDSEEEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED
         +SEEEIGG+E GD GVEGVDGDVL+EESG GG EDGPD ED EE+EED
Subjt:  RDSEEEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED

A0A162ADF4 Uncharacterized protein1.7e-2148.32Show/hide
Query:  HVELIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGR
        H+ +IPT  + SNFP+ P ++ D Q+      +L Q      R+RD GA ++R P     +ALV   D    SDLL PV G  VE+ VVDSD AVGV+G 
Subjt:  HVELIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGR

Query:  DSEEEIGGQETGDAG-VEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED
        D + E+GG+E GD G VEGVDG VLE E+GL G E+GPD E+ EE +E+
Subjt:  DSEEEIGGQETGDAG-VEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED

A0A1J3IDI1 Uncharacterized protein3.7e-1645.16Show/hide
Query:  DKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSEEEIGG
        +K  NFP    +++D QR  + ++++I+    E  + +GG+ D+R PY +F ++L+  RD   ESDLL PVSG  VE  VVD+D  VGV GR+S+ EIG 
Subjt:  DKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSEEEIGG

Query:  QE----TGDAGVEGVDGDVLEEES
        +E     GD  VEGVDG VLE+E+
Subjt:  QE----TGDAGVEGVDGDVLEEES

A0A2Z7A2Z7 Uncharacterized protein2.3e-1843.92Show/hide
Query:  VELIPTTDKVSNFPTDPPLNSDKQRQRSDVTI-LIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGR
        +++IPT     +FP     N D+      V + L +C +   R+RD  A DER PY + L+ALV  RD+ VE DLLV V G +V++ VVD+D+ VGVAG 
Subjt:  VELIPTTDKVSNFPTDPPLNSDKQRQRSDVTI-LIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGR

Query:  DSEEEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED
        D + + GG++ G   VE  DG VLE ESG  G EDGP  ++ E+++ED
Subjt:  DSEEEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED

A0A498HYB9 Uncharacterized protein2.5e-2046.53Show/hide
Query:  LIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSE
        ++PT D+ ++ P DP ++ D+Q+ R  + +L Q       + D GA DER P  + L+ALV  RDER E DLL  V    VE  VVD+D  V V+G D +
Subjt:  LIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDAAVGVAGRDSE

Query:  EEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEE
         E GG++ G  GVE  DGDVLE+E+GLGG EDGP  ED ++E+E
Subjt:  EEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATAAGACGGCGGACACCCATCGAACTTGATCACCACCGGGCAGTTCACGTGGAACTGATACCGACCACTGATAAAGTTTCCAACTTTCCAACGGACCCGCCCCT
CAATTCTGACAAGCAACGGCAGCGCTCCGACGTCACGATCCTGATTCAGTGCCGTGCTGATGAAGGGCGCAACCGGGACGGCGGTGCCGGAGACGAAAGGGGACCATACG
CTAACTTCCTTATGGCCTTGGTAAAACCGAGGGATGAGCGTGTGGAGAGTGATCTGTTGGTTCCGGTAAGTGGCGGACACGTGGAGGTCTTCGTAGTAGATTCCGATGCG
GCGGTTGGGGTTGCGGGAAGAGATAGTGAGGAGGAAATTGGAGGTCAGGAAACTGGGGACGCTGGCGTTGAAGGCGTAGACGGTGACGTCTTGGAGGAGGAAAGTGGGCT
TGGTGGGGCGGAGGACGGCCCAGATTATGAGGATGCAGAGGAGGAGGAGGAAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATAAGACGGCGGACACCCATCGAACTTGATCACCACCGGGCAGTTCACGTGGAACTGATACCGACCACTGATAAAGTTTCCAACTTTCCAACGGACCCGCCCCT
CAATTCTGACAAGCAACGGCAGCGCTCCGACGTCACGATCCTGATTCAGTGCCGTGCTGATGAAGGGCGCAACCGGGACGGCGGTGCCGGAGACGAAAGGGGACCATACG
CTAACTTCCTTATGGCCTTGGTAAAACCGAGGGATGAGCGTGTGGAGAGTGATCTGTTGGTTCCGGTAAGTGGCGGACACGTGGAGGTCTTCGTAGTAGATTCCGATGCG
GCGGTTGGGGTTGCGGGAAGAGATAGTGAGGAGGAAATTGGAGGTCAGGAAACTGGGGACGCTGGCGTTGAAGGCGTAGACGGTGACGTCTTGGAGGAGGAAAGTGGGCT
TGGTGGGGCGGAGGACGGCCCAGATTATGAGGATGCAGAGGAGGAGGAGGAAGATTAA
Protein sequenceShow/hide protein sequence
MAIRRRTPIELDHHRAVHVELIPTTDKVSNFPTDPPLNSDKQRQRSDVTILIQCRADEGRNRDGGAGDERGPYANFLMALVKPRDERVESDLLVPVSGGHVEVFVVDSDA
AVGVAGRDSEEEIGGQETGDAGVEGVDGDVLEEESGLGGAEDGPDYEDAEEEEED