; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G004740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G004740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein CHUP1, chloroplastic-like
Genome locationCmo_Chr14:2333159..2337093
RNA-Seq ExpressionCmoCh14G004740
SyntenyCmoCh14G004740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33975.1 hypothetical protein, partial [Cucumis melo subsp. melo]9.7e-1285.19Show/hide
Query:  DPDPDPDPEAEPEPLLDPLPEPPPPPPPPPPLGCCTAARLMLLLIKKMRKQKRR
        DPDPDPDPEAEP PLLD LP+PPPPPPPPPPLG CTAARL LL+IKKM+KQK+R
Subjt:  DPDPDPDPEAEPEPLLDPLPEPPPPPPPPPPLGCCTAARLMLLLIKKMRKQKRR

KAG6580848.1 hypothetical protein SDJN03_20850, partial [Cucurbita argyrosperma subsp. sororia]6.7e-3767.79Show/hide
Query:  LNMVSTADLISLVTKIGLFRSSTKKIR-------------------------------------GKAFLWFKPIAWGDTLLEPDPLPLPDPDPDPDPEAE
        L+ VSTADLISLVTKIGLFRSSTKKIR                                     GKAFLWFKPIAWGDTLLEPDPLPL  PDPDPDPEAE
Subjt:  LNMVSTADLISLVTKIGLFRSSTKKIR-------------------------------------GKAFLWFKPIAWGDTLLEPDPLPLPDPDPDPDPEAE

Query:  PEPLLDPLPEPPPPPPPPPPLGCCTAAR------LMLLLIKKMRKQKRR
        PEPLLDPLPEPPPPPPPPPPLGCCTAAR      L+LLLIKKMRKQKRR
Subjt:  PEPLLDPLPEPPPPPPPPPPLGCCTAAR------LMLLLIKKMRKQKRR

XP_022147153.1 protein CHUP1, chloroplastic-like [Momordica charantia]1.8e-0576.6Show/hide
Query:  IAWGDTLLEPDPLPLPDPDPDPDPEAEPEPLLDPLPEPPPPPPPPPP
        +AW D+ LEP P PL  PDPDP+PEAEPEPLLDP P PPPPPPPPPP
Subjt:  IAWGDTLLEPDPLPLPDPDPDPDPEAEPEPLLDPLPEPPPPPPPPPP

TrEMBL top hitse value%identityAlignment
A0A6J1D0H8 protein CHUP1, chloroplastic-like8.6e-0676.6Show/hide
Query:  IAWGDTLLEPDPLPLPDPDPDPDPEAEPEPLLDPLPEPPPPPPPPPP
        +AW D+ LEP P PL  PDPDP+PEAEPEPLLDP P PPPPPPPPPP
Subjt:  IAWGDTLLEPDPLPLPDPDPDPDPEAEPEPLLDPLPEPPPPPPPPPP

E5GBX5 Uncharacterized protein (Fragment)4.7e-1285.19Show/hide
Query:  DPDPDPDPEAEPEPLLDPLPEPPPPPPPPPPLGCCTAARLMLLLIKKMRKQKRR
        DPDPDPDPEAEP PLLD LP+PPPPPPPPPPLG CTAARL LL+IKKM+KQK+R
Subjt:  DPDPDPDPEAEPEPLLDPLPEPPPPPPPPPPLGCCTAARLMLLLIKKMRKQKRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATGGGGCAATTGATGATCTGCAGGTTTCTCAAAGTTTCGATCGATCCGTCAAGCCATTCAGGTAGGGATGCATTAGGTGGCACCATATCTCTTACATGGAAGGC
TAGGGATTTTATTTCAGTGACTGGTTTGATGCGTGATTCTCTTCAGGTGAATGGAGGAGCCCATGTGCCATCCATAACTGAATCACGTCATTTGAAGATAATATGCGGTC
TGGAATTTGGCAAGTGTGCTCTTACCTATACCTGCTTCCCCAACTATGAGGAAGAACCCATGAATAGATTTGAAAGTTGTCAGAAGTTCAGCATACCGATCGCCATCATA
ACATCAAAAAGAATTGATTTAAGGCTCAACATGGTGTCTACAGCAGATCTGATTAGTCTCGTGACGAAGATTGGTCTTTTCCGATCTTCCACTAAGAAAATCAGGGGAAA
GGCCTTCCTGTGGTTCAAGCCAATTGCCTGGGGGGACACTCTGCTGGAACCAGACCCGCTACCACTCCCAGACCCCGACCCCGACCCCGACCCAGAAGCTGAGCCCGAAC
CACTGCTCGATCCACTTCCTGAGCCTCCCCCACCGCCGCCGCCGCCACCACCATTGGGCTGCTGCACAGCCGCAAGGCTGATGCTGCTGCTTATTAAGAAGATGAGAAAG
CAGAAGCGGAGAGTATTGGGAGTTTGTGGGTTTGGGGCGTCTGGCATTTGTTGA
mRNA sequenceShow/hide mRNA sequence
CACCGTATTCCAATATTGGAAGCCATAACCCGGCGCCGCCCCTTTGACTTTTACAGATCCTACAATTTTGGCCGTTTCAACACCTGTAAACGCTTGTAACCTCCCTACAT
TGATGGTTATGGGGCAATTGATGATCTGCAGGTTTCTCAAAGTTTCGATCGATCCGTCAAGCCATTCAGGTAGGGATGCATTAGGTGGCACCATATCTCTTACATGGAAG
GCTAGGGATTTTATTTCAGTGACTGGTTTGATGCGTGATTCTCTTCAGGTGAATGGAGGAGCCCATGTGCCATCCATAACTGAATCACGTCATTTGAAGATAATATGCGG
TCTGGAATTTGGCAAGTGTGCTCTTACCTATACCTGCTTCCCCAACTATGAGGAAGAACCCATGAATAGATTTGAAAGTTGTCAGAAGTTCAGCATACCGATCGCCATCA
TAACATCAAAAAGAATTGATTTAAGGCTCAACATGGTGTCTACAGCAGATCTGATTAGTCTCGTGACGAAGATTGGTCTTTTCCGATCTTCCACTAAGAAAATCAGGGGA
AAGGCCTTCCTGTGGTTCAAGCCAATTGCCTGGGGGGACACTCTGCTGGAACCAGACCCGCTACCACTCCCAGACCCCGACCCCGACCCCGACCCAGAAGCTGAGCCCGA
ACCACTGCTCGATCCACTTCCTGAGCCTCCCCCACCGCCGCCGCCGCCACCACCATTGGGCTGCTGCACAGCCGCAAGGCTGATGCTGCTGCTTATTAAGAAGATGAGAA
AGCAGAAGCGGAGAGTATTGGGAGTTTGTGGGTTTGGGGCGTCTGGCATTTGTTGA
Protein sequenceShow/hide protein sequence
MVMGQLMICRFLKVSIDPSSHSGRDALGGTISLTWKARDFISVTGLMRDSLQVNGGAHVPSITESRHLKIICGLEFGKCALTYTCFPNYEEEPMNRFESCQKFSIPIAII
TSKRIDLRLNMVSTADLISLVTKIGLFRSSTKKIRGKAFLWFKPIAWGDTLLEPDPLPLPDPDPDPDPEAEPEPLLDPLPEPPPPPPPPPPLGCCTAARLMLLLIKKMRK
QKRRVLGVCGFGASGIC