; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G004830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G004830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein s2
Genome locationCmo_Chr14:2394031..2396305
RNA-Seq ExpressionCmoCh14G004830
SyntenyCmoCh14G004830
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000851 - Ribosomal protein S5
IPR005324 - Ribosomal protein S5, C-terminal
IPR005711 - Ribosomal protein S5, eukaryotic/archaeal
IPR013810 - Ribosomal protein S5, N-terminal
IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup
IPR018192 - Ribosomal protein S5, N-terminal, conserved site
IPR020568 - Ribosomal protein S5 domain 2-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017612.1 40S ribosomal protein S2-3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-14599.63Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

XP_008443195.1 PREDICTED: 40S ribosomal protein S2-3-like [Cucumis melo]5.4e-14498.14Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIYLHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPD+V+A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

XP_022935112.1 40S ribosomal protein S2-4-like [Cucurbita moschata]1.3e-145100Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

XP_023522607.1 40S ribosomal protein S2-4-like [Cucurbita pepo subsp. pepo]1.4e-14499.26Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKV A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

XP_038906344.1 40S ribosomal protein S2-4-like [Benincasa hispida]2.4e-14498.51Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPD+V+A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

TrEMBL top hitse value%identityAlignment
A0A0A0LFC7 S5 DRBM domain-containing protein2.6e-14498.14Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPD+V+A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

A0A1S3B7F9 40S ribosomal protein S2-3-like2.6e-14498.14Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIYLHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPD+V+A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

A0A5D3DPL0 40S ribosomal protein S2-3-like2.6e-14498.14Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIYLHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPD+V+A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

A0A6J1F4N7 40S ribosomal protein S2-4-like6.3e-146100Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

E5GBY7 40S ribosomal protein s22.6e-14498.14Show/hide
Query:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIYLHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPD+V+A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

SwissProt top hitse value%identityAlignment
P49154 40S ribosomal protein S21.1e-9974.1Show/hide
Query:  RGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRF
        RGGF  GFGGRGRG G  RGRG  R  G +D +++WVPVTKLGRLVK+ KI++LE+IYL SLPIKE +IID  +G +LKDEV+KIMPVQKQTRAGQRTRF
Subjt:  RGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRF

Query:  KAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDVFT
        KAFV +GD NGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV V+++PAPRG GIV+A VPKK+L  AGI+D +T
Subjt:  KAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDVFT

Query:  SSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAK
        S+RG T TLGNF KAT+  +  TY +LTP+ WRET FTKSP+QE+TD LAK
Subjt:  SSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAK

P49688 40S ribosomal protein S2-32.3e-12184.76Show/hide
Query:  ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ
        ERG FGRGFGGRG  G  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQIYLHSLP+KE+QIID LIGP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKV
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD LA    KAL    PD V
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKV

Q8L8Y0 40S ribosomal protein S2-11.8e-11885Show/hide
Query:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

Q93VB8 40S ribosomal protein S2-21.8e-11885Show/hide
Query:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

Q9SCM3 40S ribosomal protein S2-41.0e-12187.55Show/hide
Query:  ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTR
        +RG FGRGFGGRG G GG RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYLHSLP+KE+QIID L+GPSLKDEVMKIMPVQKQTRAGQRTR
Subjt:  ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTR

Query:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDVF
        FKAF+VVGD NGHVGLGVKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+GIVAARVPKKVLQFAGI+DVF
Subjt:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDVF

Query:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK
        TSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+KSP+QEHTD LL  P VK
Subjt:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK

Arabidopsis top hitse value%identityAlignment
AT1G58380.1 Ribosomal protein S5 family protein1.3e-11985Show/hide
Query:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

AT1G58983.1 Ribosomal protein S5 family protein1.3e-11985Show/hide
Query:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

AT1G59359.1 Ribosomal protein S5 family protein1.3e-11985Show/hide
Query:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

AT2G41840.1 Ribosomal protein S5 family protein1.6e-12284.76Show/hide
Query:  ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ
        ERG FGRGFGGRG  G  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQIYLHSLP+KE+QIID LIGP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKV
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD LA    KAL    PD V
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKV

AT3G57490.1 Ribosomal protein S5 family protein7.4e-12387.55Show/hide
Query:  ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTR
        +RG FGRGFGGRG G GG RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYLHSLP+KE+QIID L+GPSLKDEVMKIMPVQKQTRAGQRTR
Subjt:  ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTR

Query:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDVF
        FKAF+VVGD NGHVGLGVKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+GIVAARVPKKVLQFAGI+DVF
Subjt:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDVF

Query:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK
        TSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+KSP+QEHTD LL  P VK
Subjt:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCGAGGCGGATTTGGACGAGGCTTCGGCGGCAGAGGTCGCGGTGGAGGTGACCGCGGCCGCGGAGGTCGCCGTCGCGCTGGTCGACGTGATGAAGAGGAGAA
GTGGGTTCCTGTCACTAAGCTAGGGCGCCTCGTAAAAGAAGGTAAGATCCAGTCCTTGGAGCAGATTTATCTCCATTCTCTCCCCATAAAGGAGCACCAGATCATTGATA
CCCTCATTGGCCCTAGCCTAAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGAACTCGTTTCAAGGCTTTCGTCGTTGTCGGCGAT
GGTAATGGCCATGTGGGTTTGGGAGTAAAGTGTAGTAAGGAAGTTGCCACAGCGATTCGCGGTTCCATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTA
TTGGGGTAACAAGATTGGTAAGCCTCACACAGTGCCGTGTAAGGTTACTGGAAAGTGTGGATCCGTCACTGTCCAGATGGTTCCAGCGCCACGAGGTGCTGGGATTGTGG
CGGCTCGAGTTCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACATCTTCTAGGGGATCGACTAAAACTCTCGGCAACTTTGTTAAGGCAACCTTCGAC
TGTCTGCTGAAAACTTACGGCTTCTTAACACCTGAATTTTGGAGGGAAACACGTTTCACAAAATCCCCATTCCAGGAGCACACAGATCTATTGGCGAAGCCTACCGTGAA
GGCATTGTTGTTGGAAGATCCTGATAAGGTTTCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
TTTCATACTAAGTTCGTCTCTCCATCAACTGTGCCAATTTATTGTCCAACACCTCATATCTTTTCACTCCTTCAACTTTCCCCCCTTTTCCCTATCAATGGCGGAGCGAG
GCGGATTTGGACGAGGCTTCGGCGGCAGAGGTCGCGGTGGAGGTGACCGCGGCCGCGGAGGTCGCCGTCGCGCTGGTCGACGTGATGAAGAGGAGAAGTGGGTTCCTGTC
ACTAAGCTAGGGCGCCTCGTAAAAGAAGGTAAGATCCAGTCCTTGGAGCAGATTTATCTCCATTCTCTCCCCATAAAGGAGCACCAGATCATTGATACCCTCATTGGCCC
TAGCCTAAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGAACTCGTTTCAAGGCTTTCGTCGTTGTCGGCGATGGTAATGGCCATG
TGGGTTTGGGAGTAAAGTGTAGTAAGGAAGTTGCCACAGCGATTCGCGGTTCCATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTATTGGGGTAACAAG
ATTGGTAAGCCTCACACAGTGCCGTGTAAGGTTACTGGAAAGTGTGGATCCGTCACTGTCCAGATGGTTCCAGCGCCACGAGGTGCTGGGATTGTGGCGGCTCGAGTTCC
CAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACATCTTCTAGGGGATCGACTAAAACTCTCGGCAACTTTGTTAAGGCAACCTTCGACTGTCTGCTGAAAA
CTTACGGCTTCTTAACACCTGAATTTTGGAGGGAAACACGTTTCACAAAATCCCCATTCCAGGAGCACACAGATCTATTGGCGAAGCCTACCGTGAAGGCATTGTTGTTG
GAAGATCCTGATAAGGTTTCTGCTTAAACTTACTCAATTTCTTCTTTCAATTCTGGGAGTATATCACTGGTTTACTTGAATGAGAAAGGCTCCACACTCTTTGTTCCCCT
GGTTGAGATCTGTTACTTAGAAGGACAATTTTTTCGTGTTATGCTTTTTCTTTTTCACCAAATTTGAATTTTTACTGTAATTTATTTACCCTTTTTAGTTTCATGCATTT
CATTTTGTTGCCCATATTCATTTTTGTAATTGATTAGATTCGTAGACGTTCCTACGAAGAAACAATGATGGTACTTGAACTTGGCTTATCGAGCATGTTGATCCAACCAA
ACAAGTTGGTAATTCAACCTAAACCATATAGATTGAAATTGATTAATCCATTTGTTTGGATTATTTAGGATCTAGATCTCTTTGACATAGTAGCTTTTGTGCATTTTCTT
CCTCCAAAAACTATTCATATAGATCATTTTTTG
Protein sequenceShow/hide protein sequence
MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD
GNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFD
CLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA