; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G004970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G004970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTFIIS N-terminal domain-containing protein
Genome locationCmo_Chr14:2463505..2467541
RNA-Seq ExpressionCmoCh14G004970
SyntenyCmoCh14G004970
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003617 - Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017923 - Transcription factor IIS, N-terminal
IPR035441 - TFIIS/LEDGF domain superfamily
IPR044805 - Mediator of RNA polymerase II transcription subunit 26a/b-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022934087.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Cucurbita moschata]2.7e-23192Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
        MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE

Query:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
        SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
Subjt:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG
        VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          FFDG
Subjt:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG

Query:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
        MDDDGN            PRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
Subjt:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR

Query:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
Subjt:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

XP_022934088.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Cucurbita moschata]7.4e-22991.58Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
        MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE

Query:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
        SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
Subjt:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG
        VLILEWKQMVDVWVKATAAVQ  EVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          FFDG
Subjt:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG

Query:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
        MDDDGN            PRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
Subjt:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR

Query:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
Subjt:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

XP_022983774.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Cucurbita maxima]7.7e-22690.32Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
        MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGC RV+LAVVGDDSDGGETGFKSDFAGDGCEFE GGSKE
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE

Query:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
        SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIV EVLRIKEILNNFEEASDSVLFDSLRRLELMALSVD+LQATEIGKAVNGLRKHGSKRIRHLAR
Subjt:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG
        VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          FFDG
Subjt:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG

Query:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
        MDDDGN            PRNSGEVVKNRDNVRKTSNG PNS RCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKN QRKMDKPTIPKR
Subjt:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR

Query:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
Subjt:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

XP_023527320.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Cucurbita pepo subsp. pepo]5.7e-22991.16Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
        MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE

Query:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
        SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIV EVLRIKEILNNFEEASDSVLFDSLRRLELMALSVD+LQATEIGKAVNGLRKHGSKRIRHLAR
Subjt:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG
        VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          FFDG
Subjt:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG

Query:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
        MDDDGN            PRNSGEVVKNRDNVRKTSNGDPNS RCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
Subjt:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR

Query:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHW NGRR
Subjt:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

XP_023527321.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Cucurbita pepo subsp. pepo]1.5e-22690.74Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
        MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE

Query:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
        SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIV EVLRIKEILNNFEEASDSVLFDSLRRLELMALSVD+LQATEIGKAVNGLRKHGSKRIRHLAR
Subjt:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG
        VLILEWKQMVDVWVKATAAVQ  EVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          FFDG
Subjt:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG

Query:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
        MDDDGN            PRNSGEVVKNRDNVRKTSNGDPNS RCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
Subjt:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR

Query:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHW NGRR
Subjt:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

TrEMBL top hitse value%identityAlignment
A0A5A7UDQ2 Putative mediator of RNA polymerase II transcription subunit 26b8.4e-19478.21Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGD-DSDGGETGFKSDFAGDGCEFEGGGSK
        MAAKSGSLDSWRNYFRNANSDIF IIDYAILVAASDCPKEF+LRRDRIAEQLFSCRLTRC GCDRVELAV GD D D GETGFKSDFAGDGCEFE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGD-DSDGGETGFKSDFAGDGCEFEGGGSK

Query:  ESKVYSSRDDAGEMN---FISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIR
        ESKVYSSRDD GEMN     +F   EAEALTDEIEQESQIV EVLRIKEILNNFE+ SDSVLF+SLRRLELMALSVD+LQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDAGEMN---FISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIR

Query:  HLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLK
        HLARVLI+EWK MVDVWV+ATAAVQ AEVTPDSK+KS AA +EEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          
Subjt:  HLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLK

Query:  FFDGMDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKP--------NSGLLRPQKLSTEQKNT
        FFDGMDDDGN            PRNSG+ VKNR+NVRKTSNG+ N TRC QQT REV+V +K NK+QMKEQVVKP        NSGLLR QKLSTEQK+ 
Subjt:  FFDGMDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKP--------NSGLLRPQKLSTEQKNT

Query:  ----QRKMDKPTIPKRSQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
            QRK++KPTIPKR+QQDNFK SDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPH+KSGG+ RHW NGRR
Subjt:  ----QRKMDKPTIPKRSQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

A0A6J1F1P6 probable mediator of RNA polymerase II transcription subunit 26b isoform X11.3e-23192Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
        MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE

Query:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
        SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
Subjt:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG
        VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          FFDG
Subjt:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG

Query:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
        MDDDGN            PRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
Subjt:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR

Query:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
Subjt:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

A0A6J1F6N9 probable mediator of RNA polymerase II transcription subunit 26b isoform X23.6e-22991.58Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
        MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE

Query:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
        SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
Subjt:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG
        VLILEWKQMVDVWVKATAAVQ  EVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          FFDG
Subjt:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG

Query:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
        MDDDGN            PRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
Subjt:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR

Query:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
Subjt:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

A0A6J1J6V4 probable mediator of RNA polymerase II transcription subunit 26b isoform X21.0e-22389.89Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
        MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGC RV+LAVVGDDSDGGETGFKSDFAGDGCEFE GGSKE
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE

Query:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
        SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIV EVLRIKEILNNFEEASDSVLFDSLRRLELMALSVD+LQATEIGKAVNGLRKHGSKRIRHLAR
Subjt:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG
        VLILEWKQMVDVWVKATAAVQ  EVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          FFDG
Subjt:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG

Query:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
        MDDDGN            PRNSGEVVKNRDNVRKTSNG PNS RCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKN QRKMDKPTIPKR
Subjt:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR

Query:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
Subjt:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

A0A6J1J8F3 probable mediator of RNA polymerase II transcription subunit 26b isoform X13.7e-22690.32Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE
        MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGC RV+LAVVGDDSDGGETGFKSDFAGDGCEFE GGSKE
Subjt:  MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKE

Query:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR
        SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIV EVLRIKEILNNFEEASDSVLFDSLRRLELMALSVD+LQATEIGKAVNGLRKHGSKRIRHLAR
Subjt:  SKVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLAR

Query:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG
        VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ                          FFDG
Subjt:  VLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDG

Query:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR
        MDDDGN            PRNSGEVVKNRDNVRKTSNG PNS RCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKN QRKMDKPTIPKR
Subjt:  MDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKR

Query:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
Subjt:  SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

SwissProt top hitse value%identityAlignment
F4J4Y5 Probable mediator of RNA polymerase II transcription subunit 26a9.3e-5739.07Show/hide
Query:  SGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKESKVY
        S SLD+WR YFR  +SDIF IID+AI+VAA+D PKEFK R DRIAE LFSC+++RC GCD +EL++ GD++         +  G G    GGG       
Subjt:  SGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKESKVY

Query:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARVLIL
          R D+G               T E E+ S  V+EV+RI++IL+N ++  DSVL +SLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+ L  
Subjt:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARVLIL

Query:  EWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDGMDDD
        EWK++VD W+     +   E TP+S N S          EEE  PSPP D    +  +P   ELSQ          ++DC                +D D
Subjt:  EWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDGMDDD

Query:  GNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQ--KNTQRKMDKPTIPKRS-
        GN R  +        R S      R   + T++ +     C  Q  R  +   +  K    + VV+P     R  K S EQ     QRK    T  KR  
Subjt:  GNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQ--KNTQRKMDKPTIPKRS-

Query:  ---QQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRH
           QQD  K+ D      K E  KRKLQESY Q ENAK+QRTIQV+E   +PKQ    + P +K    +R+
Subjt:  ---QQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRH

F4KFC7 Probable mediator of RNA polymerase II transcription subunit 26c1.9e-1724.48Show/hide
Query:  LDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRL-TRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEG--GGSKESKVY
        LD +R+   NA  D+++ ID AILVA+ D  +E K RRD I E+L++  +  +C  C                     DF G G   E   G     +V+
Subjt:  LDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRL-TRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEG--GGSKESKVY

Query:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQI----------VEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKR
           ++  E    +  E E    +  +E +              + ++ IKE L +  + S+  L + L+ LE M ++  +LQ T+IG+ VN +RKH S  
Subjt:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQI----------VEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKR

Query:  IRHLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSL
        +R LA+ L+ +WK+ VD WVK     Q  ++ P S         +ED   ++ L +    +   F   P                               
Subjt:  IRHLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSL

Query:  LKFFDGMDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDK
                                P+N                                      + S     + +P     +P+ ++ + +       K
Subjt:  LKFFDGMDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDK

Query:  PTIPKRSQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQ--RHW
        P+ P  SQQ      D+   +V  +  +++LQ++Y+QAENAKKQRTIQVM++HD+PK   G   P  K G  Q  RHW
Subjt:  PTIPKRSQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQ--RHW

P23881 Transcription elongation factor A protein 39.1e-0433.06Show/hide
Query:  EEVLRI-KEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGS-KRIRHLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAA
        EE+LRI K++             D L++L    +S+  LQ T IG AVNG+RKH S K +  LA+VLI  WK+++D          +   T   + +   
Subjt:  EEVLRI-KEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGS-KRIRHLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAA

Query:  ATEEE----DDYEEEGLPSPP
        A +E+     D++ E   SPP
Subjt:  ATEEE----DDYEEEGLPSPP

Q2KI09 Transcription elongation factor A protein 34.1e-0435.9Show/hide
Query:  EEVLRI-KEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKH-GSKRIRHLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAA
        EE+LRI K++             D L++L    +S+  LQ T IG AVNG+RKH  +K +  LA+VLI  WKQ++D    AT   +  E    +K K   
Subjt:  EEVLRI-KEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKH-GSKRIRHLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAA

Query:  ATEEEDDYEEEGLPSPP
           +  D++ E   SPP
Subjt:  ATEEEDDYEEEGLPSPP

Q9FHK9 Probable mediator of RNA polymerase II transcription subunit 26b1.2e-7744.2Show/hide
Query:  SGSLDSWRNYF-RNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDD-SDGGETGFKSDFAGDGCEFE-GGGSKES
        SGSLDSWR YF R  +SDIF IID+AI+VAA+DCP +FK RRD+IAE LFSCR+ RC GCD +EL+V GDD ++ G TG          ++E  GGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDD-SDGGETGFKSDFAGDGCEFE-GGGSKES

Query:  KVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARV
        K  SSR D  ++   ++   EAEAL+DEIE+ S + +EV RIKEIL N E+  +SVL DSLR L+LM+L+VD L++TEIGKAVNGLRKH S +IR LA+ 
Subjt:  KVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARV

Query:  LILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDGM
        LI EWK++VD WV  T  +  AE TP+S N S          EEE  PS P D    FT +P   E+S                           FFD +
Subjt:  LILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDGM

Query:  DDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQ--KN---TQRKMDKPT
        D DGN            PRNS E   +R++ R+  N         Q  ++  D P +     +K        G  RP K STEQ  KN   +  K +KP 
Subjt:  DDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQ--KN---TQRKMDKPT

Query:  IPKR------------SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        I ++             QQ+  K  D      K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   +    + G   R+WANGR+
Subjt:  IPKR------------SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

Arabidopsis top hitse value%identityAlignment
AT3G10820.1 Transcription elongation factor (TFIIS) family protein1.7e-5045.86Show/hide
Query:  SGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKESKVY
        S SLD+WR YFR  +SDIF IID+AI+VAA+D PKEFK R DRIAE LFSC+++RC GCD +EL++ GD++         +  G G    GGG       
Subjt:  SGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKESKVY

Query:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARVLIL
          R D+G               T E E+ S  V+EV+RI++IL+N ++  DSVL +SLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+ L  
Subjt:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARVLIL

Query:  EWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ
        EWK++VD W+     +   E TP+S N S          EEE  PSPP D    +  +P   ELSQ
Subjt:  EWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ

AT3G10820.2 Transcription elongation factor (TFIIS) family protein6.6e-5839.07Show/hide
Query:  SGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKESKVY
        S SLD+WR YFR  +SDIF IID+AI+VAA+D PKEFK R DRIAE LFSC+++RC GCD +EL++ GD++         +  G G    GGG       
Subjt:  SGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKESKVY

Query:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARVLIL
          R D+G               T E E+ S  V+EV+RI++IL+N ++  DSVL +SLR+LE M++SVD L+ TEIGKAVNGLR+H S +I  LA+ L  
Subjt:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARVLIL

Query:  EWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDGMDDD
        EWK++VD W+     +   E TP+S N S          EEE  PSPP D    +  +P   ELSQ          ++DC                +D D
Subjt:  EWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDGMDDD

Query:  GNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQ--KNTQRKMDKPTIPKRS-
        GN R  +        R S      R   + T++ +     C  Q  R  +   +  K    + VV+P     R  K S EQ     QRK    T  KR  
Subjt:  GNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQ--KNTQRKMDKPTIPKRS-

Query:  ---QQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRH
           QQD  K+ D      K E  KRKLQESY Q ENAK+QRTIQV+E   +PKQ    + P +K    +R+
Subjt:  ---QQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRH

AT5G05140.1 Transcription elongation factor (TFIIS) family protein8.8e-7944.2Show/hide
Query:  SGSLDSWRNYF-RNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDD-SDGGETGFKSDFAGDGCEFE-GGGSKES
        SGSLDSWR YF R  +SDIF IID+AI+VAA+DCP +FK RRD+IAE LFSCR+ RC GCD +EL+V GDD ++ G TG          ++E  GGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDD-SDGGETGFKSDFAGDGCEFE-GGGSKES

Query:  KVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARV
        K  SSR D  ++   ++   EAEAL+DEIE+ S + +EV RIKEIL N E+  +SVL DSLR L+LM+L+VD L++TEIGKAVNGLRKH S +IR LA+ 
Subjt:  KVYSSRDDAGEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARV

Query:  LILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDGM
        LI EWK++VD WV  T  +  AE TP+S N S          EEE  PS P D    FT +P   E+S                           FFD +
Subjt:  LILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDGM

Query:  DDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQ--KN---TQRKMDKPT
        D DGN            PRNS E   +R++ R+  N         Q  ++  D P +     +K        G  RP K STEQ  KN   +  K +KP 
Subjt:  DDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQ--KN---TQRKMDKPT

Query:  IPKR------------SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR
        I ++             QQ+  K  D      K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   +    + G   R+WANGR+
Subjt:  IPKR------------SQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR

AT5G09850.1 Transcription elongation factor (TFIIS) family protein1.3e-1824.48Show/hide
Query:  LDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRL-TRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEG--GGSKESKVY
        LD +R+   NA  D+++ ID AILVA+ D  +E K RRD I E+L++  +  +C  C                     DF G G   E   G     +V+
Subjt:  LDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRL-TRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEG--GGSKESKVY

Query:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQI----------VEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKR
           ++  E    +  E E    +  +E +              + ++ IKE L +  + S+  L + L+ LE M ++  +LQ T+IG+ VN +RKH S  
Subjt:  SSRDDAGEMNFISFGEAEAEALTDEIEQESQI----------VEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKR

Query:  IRHLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSL
        +R LA+ L+ +WK+ VD WVK     Q  ++ P S         +ED   ++ L +    +   F   P                               
Subjt:  IRHLARVLILEWKQMVDVWVKATAAVQAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSL

Query:  LKFFDGMDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDK
                                P+N                                      + S     + +P     +P+ ++ + +       K
Subjt:  LKFFDGMDDDGNSRLRIGIYVVSDPRNSGEVVKNRDNVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDK

Query:  PTIPKRSQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQ--RHW
        P+ P  SQQ      D+   +V  +  +++LQ++Y+QAENAKKQRTIQVM++HD+PK   G   P  K G  Q  RHW
Subjt:  PTIPKRSQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGLGHRNPHIKSGGYQ--RHW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCAAATCTGGGTCGTTGGATTCGTGGAGGAATTACTTCCGGAATGCGAATTCGGATATCTTTAGCATAATCGATTACGCAATCTTGGTGGCGGCTTCTGATTG
CCCTAAAGAGTTCAAGTTGAGGAGAGATCGAATAGCAGAGCAGTTGTTCTCTTGCCGATTGACTCGCTGTTTTGGCTGCGATCGAGTGGAGCTAGCGGTGGTCGGCGACG
ACAGCGACGGCGGCGAAACGGGTTTCAAGAGCGATTTTGCTGGAGATGGGTGTGAGTTTGAAGGCGGTGGTAGCAAAGAAAGCAAGGTTTATAGCAGTAGAGATGATGCA
GGGGAGATGAATTTCATTAGCTTTGGTGAAGCTGAAGCTGAAGCATTAACTGATGAAATTGAACAAGAATCTCAGATTGTTGAGGAGGTTTTGAGGATCAAAGAGATTCT
TAATAACTTCGAAGAAGCGTCTGATTCAGTGTTGTTTGATTCACTTAGAAGACTTGAATTGATGGCTTTATCAGTTGATTCACTGCAGGCAACTGAGATTGGCAAGGCTG
TTAATGGCCTCCGAAAGCACGGATCGAAGCGCATCCGCCATCTTGCTCGAGTTCTTATCTTGGAGTGGAAACAAATGGTGGACGTGTGGGTAAAAGCCACCGCTGCGGTT
CAAGCTGCAGAAGTCACACCCGACTCGAAAAACAAGTCTGCTGCTGCAACAGAAGAAGAAGATGATTATGAAGAAGAAGGGCTTCCATCTCCTCCTTTAGACGAAGCTGC
ATTTTTTACGACGCAGCCGACATCCATGGAGCTCTCACAAAAACGTTATCTACTTTACGTTACATCGTTTCTGATCGACTGTATTTTACTTTCGGTTCCGTTCCGTTCCC
TGCTGAAGTTCTTTGATGGCATGGACGATGATGGAAATTCACGATTACGAATCGGGATATATGTCGTTTCAGATCCTCGAAACAGCGGGGAAGTCGTCAAGAACCGTGAT
AATGTGAGAAAAACATCGAATGGCGATCCAAATTCTACGAGGTGTAAACAACAAACCGTTCGAGAGGTCGACGTGCCTGCTAAGGTTAATAAGAGTCAAATGAAGGAACA
AGTTGTGAAGCCAAATTCTGGGCTTTTGAGGCCACAGAAGCTAAGCACAGAGCAGAAGAACACACAGCGCAAAATGGATAAGCCTACAATCCCAAAGAGGAGCCAGCAAG
ATAACTTCAAGAGCTCGGACGAGGTTGCGGTTCAAGTGAAACTTGAAGCTACAAAGAGGAAACTCCAAGAGAGTTACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACG
ATACAGGTTATGGAACTACACGATCTTCCCAAGCAGGGACTCGGCCATCGAAATCCACACATAAAATCTGGAGGATACCAGCGGCATTGGGCGAACGGTCGGCGTTAG
mRNA sequenceShow/hide mRNA sequence
GAGAGAGGAGAGAGAGAGAGAGGGATTTATGTAGTCTTGGTTTGGATACCCCAAAATCTGTGCCCTTTTTGCAGCACCCAGTTTTATTGTAATCTCCAATTTGTAGAGAG
AGAGAGAGAAACAAACAAACAAACAAAAAAACCCACAAATCCAATTCCAATTCCGAATCGAAATCAGTTCCATTGAAAGAGATTGAAGGATTGAATTTCTGTTCTTACTT
TTCTCTTTCATTTTCCATTTTCCCCATATTTTTCTCCCCACTAGATTCCGGAACTTTTCCGAGATTAAAGAAGATAAAAGCAAAGCAACCAAGTTCATCTGTTACTCCCT
TCGAATTTTCCAACAATCCATCAAAACAGCACTTGGGTGTTCATCAATCCCCTGTTTCTGTTCTGTTTCTGTTCCTGTTCTTGATCTGATCCTTGATTTTTCAACTCACT
CTACACACATTAACCAACTCTTTGTTGGGTTATGAACGGATGAACTACGACTGTTAATCAGTTTGTTGCTAACCATTTTCTCTGGGAATCGGATTCTGGTGGTGTTTGAT
TAGTGTTTGAGAAGGGTTTTCTTGTTGGGTGTTTATCGTTTACGGATTTCCTTCCAAACCCACCTCGAATCAACTGGGTTTAACCCCAATTCTTTGTTAGGTTTTCGTTT
CGACGGCGATGGAATTCCCACATCGATTCTGATTTTTCGTTTGTGTTCGATCGAGTTTTGTAGATTCCGATCATGGCCGCCAAATCTGGGTCGTTGGATTCGTGGAGGAA
TTACTTCCGGAATGCGAATTCGGATATCTTTAGCATAATCGATTACGCAATCTTGGTGGCGGCTTCTGATTGCCCTAAAGAGTTCAAGTTGAGGAGAGATCGAATAGCAG
AGCAGTTGTTCTCTTGCCGATTGACTCGCTGTTTTGGCTGCGATCGAGTGGAGCTAGCGGTGGTCGGCGACGACAGCGACGGCGGCGAAACGGGTTTCAAGAGCGATTTT
GCTGGAGATGGGTGTGAGTTTGAAGGCGGTGGTAGCAAAGAAAGCAAGGTTTATAGCAGTAGAGATGATGCAGGGGAGATGAATTTCATTAGCTTTGGTGAAGCTGAAGC
TGAAGCATTAACTGATGAAATTGAACAAGAATCTCAGATTGTTGAGGAGGTTTTGAGGATCAAAGAGATTCTTAATAACTTCGAAGAAGCGTCTGATTCAGTGTTGTTTG
ATTCACTTAGAAGACTTGAATTGATGGCTTTATCAGTTGATTCACTGCAGGCAACTGAGATTGGCAAGGCTGTTAATGGCCTCCGAAAGCACGGATCGAAGCGCATCCGC
CATCTTGCTCGAGTTCTTATCTTGGAGTGGAAACAAATGGTGGACGTGTGGGTAAAAGCCACCGCTGCGGTTCAAGCTGCAGAAGTCACACCCGACTCGAAAAACAAGTC
TGCTGCTGCAACAGAAGAAGAAGATGATTATGAAGAAGAAGGGCTTCCATCTCCTCCTTTAGACGAAGCTGCATTTTTTACGACGCAGCCGACATCCATGGAGCTCTCAC
AAAAACGTTATCTACTTTACGTTACATCGTTTCTGATCGACTGTATTTTACTTTCGGTTCCGTTCCGTTCCCTGCTGAAGTTCTTTGATGGCATGGACGATGATGGAAAT
TCACGATTACGAATCGGGATATATGTCGTTTCAGATCCTCGAAACAGCGGGGAAGTCGTCAAGAACCGTGATAATGTGAGAAAAACATCGAATGGCGATCCAAATTCTAC
GAGGTGTAAACAACAAACCGTTCGAGAGGTCGACGTGCCTGCTAAGGTTAATAAGAGTCAAATGAAGGAACAAGTTGTGAAGCCAAATTCTGGGCTTTTGAGGCCACAGA
AGCTAAGCACAGAGCAGAAGAACACACAGCGCAAAATGGATAAGCCTACAATCCCAAAGAGGAGCCAGCAAGATAACTTCAAGAGCTCGGACGAGGTTGCGGTTCAAGTG
AAACTTGAAGCTACAAAGAGGAAACTCCAAGAGAGTTACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACGATACAGGTTATGGAACTACACGATCTTCCCAAGCAGGG
ACTCGGCCATCGAAATCCACACATAAAATCTGGAGGATACCAGCGGCATTGGGCGAACGGTCGGCGTTAGGATCGTCGATGTTAAAAGGTAGAAGACTGATGGTTCCAAG
AATCAGGTGGAAGGAAGATGGTTCCAGCTAAAGCTCCCTGGCAAACAGTGTCTGTCTTGACCGACTTGCTCGAAGGTAAACATCAAGAAACTTGGGTTCGGTTTCGGTCT
GGCGTGCCGGAGAAGGCGGTCGAGATTGTAAGGAGAGTTGGAGCTTTATCCTGTTTACATAATTACTGTATAGAAGGCTTGATTTGATATCCTCTTCACTTCAGTGACTG
TTTGTTACATTCAAGGAAGCCTTTCTTTCATATAATTTGGCACAAAAACAAGGTGCAGTCCCATAAACAGTGTAAAATCTGATCTGTATACTCCTTCTGATGATGAATGC
TCATTGTTCTTATGGAATAATAGCTACTGATTCATTCAAATGCTCTTCTTTTTGTTCTAGACCTGTTTGTTCGAGACGGGTTCGTTGAGGGGATAGAAACATGTCC
Protein sequenceShow/hide protein sequence
MAAKSGSLDSWRNYFRNANSDIFSIIDYAILVAASDCPKEFKLRRDRIAEQLFSCRLTRCFGCDRVELAVVGDDSDGGETGFKSDFAGDGCEFEGGGSKESKVYSSRDDA
GEMNFISFGEAEAEALTDEIEQESQIVEEVLRIKEILNNFEEASDSVLFDSLRRLELMALSVDSLQATEIGKAVNGLRKHGSKRIRHLARVLILEWKQMVDVWVKATAAV
QAAEVTPDSKNKSAAATEEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQKRYLLYVTSFLIDCILLSVPFRSLLKFFDGMDDDGNSRLRIGIYVVSDPRNSGEVVKNRD
NVRKTSNGDPNSTRCKQQTVREVDVPAKVNKSQMKEQVVKPNSGLLRPQKLSTEQKNTQRKMDKPTIPKRSQQDNFKSSDEVAVQVKLEATKRKLQESYQQAENAKKQRT
IQVMELHDLPKQGLGHRNPHIKSGGYQRHWANGRR