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CmoCh14G005090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G005090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr14:2516589..2517513
RNA-Seq ExpressionCmoCh14G005090
SyntenyCmoCh14G005090
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0031490 - chromatin DNA binding (molecular function)
InterPro domainsIPR036546 - Mediator complex subunit 15, KIX domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022983745.1 uncharacterized protein LOC111482271 [Cucurbita maxima]2.6e-0688.57Show/hide
Query:  MLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAK
        MLKE VSSRYPNG SSERIANLAIEYE R FKNAK
Subjt:  MLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAK
XP_023528462.1 mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Cucurbita pepo subsp. pepo]4.7e-2485.14Show/hide
Query:  MKKKRSLATATDWKAEIENATRQEAVRSIYAMLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAKQSSDFWDA
        MKKKRSLATATDWKAEI+NATRQEAVRSIYAMLKE VSS YPNGMSSERIANLAIEYE RFFKNAK    + +A
Subjt:  MKKKRSLATATDWKAEIENATRQEAVRSIYAMLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAKQSSDFWDA
XP_023528463.1 mediator of RNA polymerase II transcription subunit 15a-like isoform X2 [Cucurbita pepo subsp. pepo]1.1e-0975Show/hide
Query:  RSIYAMLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAKQSSDFWDA
        R +YAMLKE VSS YPNGMSSERIANLAIEYE RFFKNAK    + +A
Subjt:  RSIYAMLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAKQSSDFWDA
XP_038903080.1 probable mediator of RNA polymerase II transcription subunit 15c isoform X1 [Benincasa hispida]3.4e-0644.59Show/hide
Query:  MKKKRSLATATDWKAEIENATRQEAVRSIYAMLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAKQSSDFWDA
        M KK + ATATDW+ EI N TR +  R I  ML E+ S+ + +GM+ + I+ LA E+EM  F  AK   D+ +A
Subjt:  MKKKRSLATATDWKAEIENATRQEAVRSIYAMLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAKQSSDFWDA
TrEMBL top hitse value%identityAlignment
A0A6J1J6S4 uncharacterized protein LOC1114822711.3e-0688.57Show/hide
Query:  MLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAK
        MLKE VSSRYPNG SSERIANLAIEYE R FKNAK
Subjt:  MLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAACGTAGCCTGGCTACTGCGACGGATTGGAAGGCGGAAATCGAGAATGCGACTAGACAGGAAGCTGTACGTTCAATATACGCGATGTTGAAGGAACGAGT
GTCTTCTCGTTATCCTAATGGCATGAGTTCGGAAAGAATTGCTAACCTTGCGATAGAATATGAGATGAGGTTCTTTAAGAACGCAAAACAGAGTTCTGACTTTTGGGATG
CATTTGTGCTGTAA
mRNA sequenceShow/hide mRNA sequence
TTCCTTATTTGCGATCTCGTTCTGCCCCAAAAGGCGCTCCCGCCAATTTCGTACTAGAATCTTCCCTTCCCTGGATTCTTGTGAAATTTCCTGAAATTCTGCTTCGAAAG
TAAAGAAGGAACTGCTTCAGCTTTTTTTTAATTTTGTGTAATGAAGAAGAAACGTAGCCTGGCTACTGCGACGGATTGGAAGGCGGAAATCGAGAATGCGACTAGACAGG
AAGCTGTACGTTCAATATACGCGATGTTGAAGGAACGAGTGTCTTCTCGTTATCCTAATGGCATGAGTTCGGAAAGAATTGCTAACCTTGCGATAGAATATGAGATGAGG
TTCTTTAAGAACGCAAAACAGAGTTCTGACTTTTGGGATGCATTTGTGCTGTAA
Protein sequenceShow/hide protein sequence
MKKKRSLATATDWKAEIENATRQEAVRSIYAMLKERVSSRYPNGMSSERIANLAIEYEMRFFKNAKQSSDFWDAFVL