; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G005380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G005380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPolynucleotide phosphorylase 1
Genome locationCmo_Chr14:2729068..2735441
RNA-Seq ExpressionCmoCh14G005380
SyntenyCmoCh14G005380
Gene Ontology termsGO:0000958 - mitochondrial mRNA catabolic process (biological process)
GO:0000965 - mitochondrial RNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0004654 - polyribonucleotide nucleotidyltransferase activity (molecular function)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR012162 - Polyribonucleotide nucleotidyltransferase
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580913.1 putative polyribonucleotide nucleotidyltransferase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.8e-14791.55Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLANTCGLHFRPCYSHAA+FSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

KAG7017661.1 putative polyribonucleotide nucleotidyltransferase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-14791.55Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLANTCGLHFRPCYSHAA+FSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

XP_022934279.1 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Cucurbita moschata]2.1e-14791.89Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

XP_022983703.1 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Cucurbita maxima]2.4e-14691.22Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLANTCGLHFRPCYSH  EFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

XP_023528975.1 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Cucurbita pepo subsp. pepo]2.1e-14791.89Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

TrEMBL top hitse value%identityAlignment
A0A0A0LHJ6 Polynucleotide phosphorylase 11.6e-12780.74Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLAN CGLHF+PCYSH +EFSH GT +ISLSSYCPRFH  TK   SSLSLLRSKK+ K LVT+AL+ S+ PDSVAASD  P SLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGH+GRQAS AVTVTDGETIVYT+VCLAD PSEPSDFFPL VNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRP+RPTM KGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNS+AVAGVRIGLV DKFIVNPTTKEME+SELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

A0A1S3B784 Polynucleotide phosphorylase 12.4e-12881.76Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLAN C LHF+PCYSH +EFSH GT +ISLSSY PRFH  TK K SSLSLLRSKK+GK LVT+AL+ S+ PDSVAASDG P SLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGH+GRQAS AVTVTDGETIVYT+VCLAD PSEPSDFFPL VNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRP+RPTM KGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNSKAVAGVRIGLV DKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

A0A5D3DPG4 Polynucleotide phosphorylase 12.4e-12881.76Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLAN C LHF+PCYSH +EFSH GT +ISLSSY PRFH  TK K SSLSLLRSKK+GK LVT+AL+ S+ PDSVAASDG P SLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGH+GRQAS AVTVTDGETIVYT+VCLAD PSEPSDFFPL VNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRP+RPTM KGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNSKAVAGVRIGLV DKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

A0A6J1F250 Polynucleotide phosphorylase 11.0e-14791.89Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

A0A6J1J8H1 Polynucleotide phosphorylase 11.1e-14691.22Show/hide
Query:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
        MLANTCGLHFRPCYSH  EFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV
Subjt:  MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILV

Query:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
        ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL
Subjt:  ETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVL

Query:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        SYDGLHTPDCLAITAAGIAV                        ALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
Subjt:  SYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

SwissProt top hitse value%identityAlignment
Q3KKJ7 Polyribonucleotide nucleotidyltransferase5.4e-4548.51Show/hide
Query:  DRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQ
        D+ ++ ETG + RQASGA+ V   ET V++S C A + SE  DF P  V+YQE+FS+AGRTSGGF KREGR  + E+L+ RLIDR LRP+ P     + Q
Subjt:  DRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQ

Query:  ILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILM
        +LS+V SYDG   PD LAI  A  A+                        A+SEVP +  +AGVR+GLV  K+++NPT  E+  S+LDLV+AGT SA+LM
Subjt:  ILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILM

Query:  IE
        IE
Subjt:  IE

Q69LE7 Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic1.2e-8466.24Show/hide
Query:  RALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKR
        RA      P  V            FS KIPVGDRHILVETGH+GRQAS +V VTDGETIVY+SVCLAD P++PSDFFP+ V+YQER SAAGRTSGGFFKR
Subjt:  RALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKR

Query:  EGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGL
        EGRA+DHEVL+CRLIDRPLRPTMPKGFY+ETQILSWV SYDG+H+PD LAITAAG+A+                        ALSEVPN + +AGVR+G+
Subjt:  EGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGL

Query:  VNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE
        +ND+F+VNPTT++M+DSELDLV+AGTDSAILMIE
Subjt:  VNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIE

Q6MDI2 Polyribonucleotide nucleotidyltransferase1.1e-4845.25Show/hide
Query:  SVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPK
        ++ +PVG + I+ ETG + RQA GAV V  GET+V+T+ C A      +DF PL V+YQE+FS+AG+T GGF KREGR  + EVL+ RLIDRP+RP   +
Subjt:  SVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPK

Query:  GFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAG
        G+Y+E Q+LS+V SYDG+++P+ LAI  A  A+                         +S++P  K V  VRIG ++ +FIVNPT ++ + S+LDL++AG
Subjt:  GFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAG

Query:  TDSAILMIEASPLFSAFLKGD
        T+ A+LMIE    F  FL  D
Subjt:  TDSAILMIEASPLFSAFLKGD

Q8GZQ3 Polyribonucleotide nucleotidyltransferase 1, chloroplastic1.7e-8663.41Show/hide
Query:  PRFHAFTKP-----KLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLA
        PRFH+  +      KL SLSLL     GK  V   +      D+ +  DG  +     SVKIP G+R ILVETG MGRQAS AVTVTDGETIVYTSVCLA
Subjt:  PRFHAFTKP-----KLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLA

Query:  DIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFI
        D+PSEPSDF PL+V+YQERFSA GRTSGGFFKREGR +DHEVLICRLIDRPLRPTMPKGFY+ETQILSWVLSYDGLH PD LA+T+AGIAV         
Subjt:  DIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFI

Query:  SVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIEASPLFSAFL
                       ALSEVPN+KA+AGVR+GL+  +FIVNPT KEME+S+LDL LAGTD+AIL IE    +S FL
Subjt:  SVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIEASPLFSAFL

Q9PL77 Polyribonucleotide nucleotidyltransferase7.1e-4549.5Show/hide
Query:  DRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQ
        D+ ++ ETG + RQA+GAV V   ET V++S C A + SE  DF P  V+YQE+FS+AG+TSGGF KREGR  + E+LI RLIDR LRP+ P     + Q
Subjt:  DRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQ

Query:  ILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILM
        +LS+V SYDG   PD LAI  A  A+                        A+SEVP +  VAGVR+GLV  K++VNPT  E++ S+LDLV+AGT SA+LM
Subjt:  ILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILM

Query:  IE
        IE
Subjt:  IE

Arabidopsis top hitse value%identityAlignment
AT2G47220.1 DOMAIN OF UNKNOWN FUNCTION 724 58.1e-3684.52Show/hide
Query:  SVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEV
        SVKIP G+R ILVETG MGRQAS AVTVTDGETIV+TSVCLAD+PSEPSDF PL+V+YQERFSA GRTSGGFFKREGR +DHEV
Subjt:  SVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEV

AT3G03710.1 polyribonucleotide nucleotidyltransferase, putative1.2e-8763.41Show/hide
Query:  PRFHAFTKP-----KLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLA
        PRFH+  +      KL SLSLL     GK  V   +      D+ +  DG  +     SVKIP G+R ILVETG MGRQAS AVTVTDGETIVYTSVCLA
Subjt:  PRFHAFTKP-----KLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLA

Query:  DIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFI
        D+PSEPSDF PL+V+YQERFSA GRTSGGFFKREGR +DHEVLICRLIDRPLRPTMPKGFY+ETQILSWVLSYDGLH PD LA+T+AGIAV         
Subjt:  DIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFI

Query:  SVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIEASPLFSAFL
                       ALSEVPN+KA+AGVR+GL+  +FIVNPT KEME+S+LDL LAGTD+AIL IE    +S FL
Subjt:  SVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIEASPLFSAFL

AT5G14580.1 polyribonucleotide nucleotidyltransferase, putative3.2e-3238.33Show/hide
Query:  PDS-VAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDH
        PDS V+A   I   L  F  +  VG R +  ETG + R A+G+V +   ET V ++V  A   S P DF PL V+YQE+  A G     + +REG  ++ 
Subjt:  PDS-VAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQASGAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDH

Query:  EVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIV
        E+L  RLIDRP+RP  P GFYHE QI++ VLS DG   PD LA  A+  A+                         LS+VP    +  +RIG +  +F+V
Subjt:  EVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVHLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIV

Query:  NPTTKEMEDSELDLVLAGTDSAILMIE
        NPT  E+  S+L+L+ A T    +MI+
Subjt:  NPTTKEMEDSELDLVLAGTDSAILMIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCGAACACTTGCGGCCTCCATTTCCGACCATGCTATTCCCACGCAGCCGAATTCTCTCATTCTGGGACATGCCAAATCTCTCTATCTTCCTATTGCCCTCGCTT
CCATGCTTTCACCAAACCGAAGCTCTCGTCTCTGTCGCTTCTTCGCAGTAAGAAAAATGGTAAGAGTTTGGTCACCAGGGCTCTTACGAATTCTGCGGAACCTGACTCGG
TTGCGGCGAGCGATGGAATACCCAGTTCTTTGCGGCCTTTCTCTGTCAAAATTCCTGTTGGGGATAGACATATCTTGGTCGAGACGGGCCATATGGGGAGACAAGCTAGT
GGTGCTGTTACAGTAACTGATGGAGAAACTATTGTTTATACATCTGTTTGTTTGGCTGATATACCAAGCGAGCCTTCGGATTTCTTTCCACTTTTTGTTAATTATCAAGA
ACGTTTTTCTGCAGCAGGTCGGACTAGCGGAGGATTCTTCAAACGCGAAGGAAGAGCAAGAGATCACGAGGTTCTCATTTGTAGATTGATTGATAGGCCCTTGCGTCCAA
CTATGCCCAAAGGTTTTTACCATGAAACCCAGATATTATCTTGGGTTTTGAGTTATGATGGTCTGCACACTCCTGATTGTTTGGCAATTACAGCAGCTGGAATAGCAGTA
CATTTATGTTGCACATACATTTTCATTTCAGTCTTCCATTTTTTAAAATCGTTATGGTTCAAAATGTACAGTGCACTTTCAGAAGTTCCTAATTCAAAAGCAGTTGCTGG
AGTTCGAATTGGTCTTGTTAACGACAAGTTTATTGTTAATCCAACTACTAAAGAGATGGAAGACTCTGAGCTTGATTTAGTACTTGCTGGCACTGATAGTGCAATATTGA
TGATAGAGGCAAGTCCACTTTTTTCAGCTTTCCTAAAGGGTGATTTTTGTGTTCCTACTCTTTGTGCTCCATAA
mRNA sequenceShow/hide mRNA sequence
CGATAAGGCAATTTTGCGAGCCGTCAATTGGGAGTGGATAAAATCCTACAATCATCCCTCTCTTCCCCTTCTCTGTCTGCTTCTCGAACAACACAGAGCAGCTGCAGCTA
CAGATCAACAATGTTAGCGAACACTTGCGGCCTCCATTTCCGACCATGCTATTCCCACGCAGCCGAATTCTCTCATTCTGGGACATGCCAAATCTCTCTATCTTCCTATT
GCCCTCGCTTCCATGCTTTCACCAAACCGAAGCTCTCGTCTCTGTCGCTTCTTCGCAGTAAGAAAAATGGTAAGAGTTTGGTCACCAGGGCTCTTACGAATTCTGCGGAA
CCTGACTCGGTTGCGGCGAGCGATGGAATACCCAGTTCTTTGCGGCCTTTCTCTGTCAAAATTCCTGTTGGGGATAGACATATCTTGGTCGAGACGGGCCATATGGGGAG
ACAAGCTAGTGGTGCTGTTACAGTAACTGATGGAGAAACTATTGTTTATACATCTGTTTGTTTGGCTGATATACCAAGCGAGCCTTCGGATTTCTTTCCACTTTTTGTTA
ATTATCAAGAACGTTTTTCTGCAGCAGGTCGGACTAGCGGAGGATTCTTCAAACGCGAAGGAAGAGCAAGAGATCACGAGGTTCTCATTTGTAGATTGATTGATAGGCCC
TTGCGTCCAACTATGCCCAAAGGTTTTTACCATGAAACCCAGATATTATCTTGGGTTTTGAGTTATGATGGTCTGCACACTCCTGATTGTTTGGCAATTACAGCAGCTGG
AATAGCAGTACATTTATGTTGCACATACATTTTCATTTCAGTCTTCCATTTTTTAAAATCGTTATGGTTCAAAATGTACAGTGCACTTTCAGAAGTTCCTAATTCAAAAG
CAGTTGCTGGAGTTCGAATTGGTCTTGTTAACGACAAGTTTATTGTTAATCCAACTACTAAAGAGATGGAAGACTCTGAGCTTGATTTAGTACTTGCTGGCACTGATAGT
GCAATATTGATGATAGAGGCAAGTCCACTTTTTTCAGCTTTCCTAAAGGGTGATTTTTGTGTTCCTACTCTTTGTGCTCCATAA
Protein sequenceShow/hide protein sequence
MLANTCGLHFRPCYSHAAEFSHSGTCQISLSSYCPRFHAFTKPKLSSLSLLRSKKNGKSLVTRALTNSAEPDSVAASDGIPSSLRPFSVKIPVGDRHILVETGHMGRQAS
GAVTVTDGETIVYTSVCLADIPSEPSDFFPLFVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAV
HLCCTYIFISVFHFLKSLWFKMYSALSEVPNSKAVAGVRIGLVNDKFIVNPTTKEMEDSELDLVLAGTDSAILMIEASPLFSAFLKGDFCVPTLCAP