; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G005760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G005760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCmo_Chr14:2940140..2941084
RNA-Seq ExpressionCmoCh14G005760
SyntenyCmoCh14G005760
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136798.1 pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Cucumis sativus]2.9e-12774.52Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +D IIQSH KSP A SEGFWIRLIMLYSS GMV+QA+  LDQ IL+K C+LSEKSLCA+LSV+L+NSMPEKVHEMFR+IPEKIGVTPT VSHNLVLKAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        +QNDL SARNWIDEL KDDAKV+PNIDS+ I LGAYW+ GD++GFD I KEISKRGLEF+L +YNYRI RLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        +IIHGY +VGDIE A K+LK +LEDGHVSP+SRIYY LIRSMVKEGEF++ALETCRE IKRRWVPPFEAME LVRGLV +SKVEEAKEVVEK KK LKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSW KIEAAL L
Subjt:  AMDSWGKIEAALSL

XP_008443376.1 PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucumis melo]2.4e-12974.2Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +D IIQSHLKSP A SEGFWIRLIMLYSS GMV QA+  LDQ IL+KPC+LSEKSLCA+LSVYL+NSMPEKVHEMFR+ PEKIGVTPTV+SHNLVLKAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        +QNDL SARNWIDELYKDDAKV+PNIDSY I LGAYW+ GD+VGFD I+KEI  RGLEF++ +YNYRI RLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        +IIHGY +VGDIE A K+LK MLEDGHVSP+SRIY+ LIRSMVKEGEFDLAL+TCR+++KRRWVPPFE ME LVRGLV +SKVEEAKEVVEK KK LKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSW KIEA L+L
Subjt:  AMDSWGKIEAALSL

XP_022983789.1 pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isoform X1 [Cucurbita maxima]4.0e-14887.58Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +DGIIQS LK P AISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNL LKAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        QQNDLE ARN IDELYKDDAKVVPNIDSYNI LGAYWNKGDLVGFDGIVKEISKRGLEF+L +YNYRILRLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        AII+GYGNVGDIELATKVLKSMLEDGHVS SSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLV ISKVEEAKEVVEK KKMLKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSWGKIEAALSL
Subjt:  AMDSWGKIEAALSL

XP_022983790.1 pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isoform X2 [Cucurbita maxima]1.7e-14385.99Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +DGIIQS LK P AISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNL LKAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        QQNDLE ARN IDELYKDDAKVVPNIDSYNI LGAYWNKGDLVGFDGIVKEISKRGLEF+L +YNYRILRLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        AII+GYGNVGDIELATKVLKSMLEDGHVS SSRIYYSLIRSMVKEGEF     TCREIIKRRWVPPFEAMEGLVRGLV ISKVEEAKEVVEK KKMLKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSWGKIEAALSL
Subjt:  AMDSWGKIEAALSL

XP_038906046.1 pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Benincasa hispida]3.7e-13880.57Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +DGIIQSH KSP AISEGFWIRLIMLYSS+GMVDQA+ TLDQVIL+KPCDLSEKSL AVLSV+L+NSMPEKVHEMFR+IPEKI VTPTVVS+N V KAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        QQNDL+SARNWIDE+YKDDAKVVPNIDSYNI LGA+WN GDLVGFDGIVKEISKRGL+F+L +YNYRILRLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        AIIHGY NVGDIE A K+LKSMLEDG+ SPSSR YYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLV +S++EEAKEVVEK KK LKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSWGKIEAALSL
Subjt:  AMDSWGKIEAALSL

TrEMBL top hitse value%identityAlignment
A0A0A0LF76 Uncharacterized protein1.4e-12774.52Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +D IIQSH KSP A SEGFWIRLIMLYSS GMV+QA+  LDQ IL+K C+LSEKSLCA+LSV+L+NSMPEKVHEMFR+IPEKIGVTPT VSHNLVLKAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        +QNDL SARNWIDEL KDDAKV+PNIDS+ I LGAYW+ GD++GFD I KEISKRGLEF+L +YNYRI RLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        +IIHGY +VGDIE A K+LK +LEDGHVSP+SRIYY LIRSMVKEGEF++ALETCRE IKRRWVPPFEAME LVRGLV +SKVEEAKEVVEK KK LKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSW KIEAAL L
Subjt:  AMDSWGKIEAALSL

A0A1S3B7X6 pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like1.2e-12974.2Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +D IIQSHLKSP A SEGFWIRLIMLYSS GMV QA+  LDQ IL+KPC+LSEKSLCA+LSVYL+NSMPEKVHEMFR+ PEKIGVTPTV+SHNLVLKAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        +QNDL SARNWIDELYKDDAKV+PNIDSY I LGAYW+ GD+VGFD I+KEI  RGLEF++ +YNYRI RLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        +IIHGY +VGDIE A K+LK MLEDGHVSP+SRIY+ LIRSMVKEGEFDLAL+TCR+++KRRWVPPFE ME LVRGLV +SKVEEAKEVVEK KK LKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSW KIEA L+L
Subjt:  AMDSWGKIEAALSL

A0A5A7UGZ0 Pentatricopeptide repeat-containing protein1.2e-12974.2Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +D IIQSHLKSP A SEGFWIRLIMLYSS GMV QA+  LDQ IL+KPC+LSEKSLCA+LSVYL+NSMPEKVHEMFR+ PEKIGVTPTV+SHNLVLKAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        +QNDL SARNWIDELYKDDAKV+PNIDSY I LGAYW+ GD+VGFD I+KEI  RGLEF++ +YNYRI RLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        +IIHGY +VGDIE A K+LK MLEDGHVSP+SRIY+ LIRSMVKEGEFDLAL+TCR+++KRRWVPPFE ME LVRGLV +SKVEEAKEVVEK KK LKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSW KIEA L+L
Subjt:  AMDSWGKIEAALSL

A0A6J1J6X0 pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isoform X28.3e-14485.99Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +DGIIQS LK P AISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNL LKAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        QQNDLE ARN IDELYKDDAKVVPNIDSYNI LGAYWNKGDLVGFDGIVKEISKRGLEF+L +YNYRILRLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        AII+GYGNVGDIELATKVLKSMLEDGHVS SSRIYYSLIRSMVKEGEF     TCREIIKRRWVPPFEAMEGLVRGLV ISKVEEAKEVVEK KKMLKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSWGKIEAALSL
Subjt:  AMDSWGKIEAALSL

A0A6J1J8H6 pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isoform X11.9e-14887.58Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        +DGIIQS LK P AISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNL LKAFV
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD
        QQNDLE ARN IDELYKDDAKVVPNIDSYNI LGAYWNKGDLVGFDGIVKEISKRGLEF+L +YNYRILRLCKNK+                      YD
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKD----------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP
        AII+GYGNVGDIELATKVLKSMLEDGHVS SSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLV ISKVEEAKEVVEK KKMLKGP
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGP

Query:  AMDSWGKIEAALSL
        A+DSWGKIEAALSL
Subjt:  AMDSWGKIEAALSL

SwissProt top hitse value%identityAlignment
Q8GW57 Pentatricopeptide repeat-containing protein At1g80150, mitochondrial1.9e-2325.77Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        ++ +++     P    EGF +R+IMLY  +GM  QA+ T   + L   C  S KS  A L V   N     + E     P K G+    VS N+ +K+F 
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------DYD
        +   L+ A   + E+ K  + + P++ +Y   + A +     V  +G+   +  +G + +L ++N RI  L   +                       Y+
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------DYD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVE
         +I G+      ++A +V  +M   G+  P+ +IY ++I  + K G FDLA   C++ ++++W P  + +E L++GLV   ++++AK ++E
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVE

Q8LE47 Pentatricopeptide repeat-containing protein At1g61870, mitochondrial1.1e-3129.34Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRT---LDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLK
        +DG I++    P   SE F    I+LY+ + M+D ++R    L++  +++    + KSL A+L   L     ++   ++  +P+  G+ P + ++N ++K
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRT---LDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLK

Query:  AFVQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYW--NKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK--------------------
         F +     S+ + + E+ +   K  PN  S+ + +  ++  +K D VG   ++  +  RG+   + +YN RI  LCK K                    
Subjt:  AFVQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYW--NKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK--------------------

Query:  --DYDAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKK
           Y  +IHG+ N  D E A K+ K M+  G   P S  Y++LI  + K G+F+ AL  C+E +++ WVP F  M+ LV GL   SKVEEAKE++ + K+
Subjt:  --DYDAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKK

Query:  MLKGPAMDSWGKIEAAL
              ++ W ++EAAL
Subjt:  MLKGPAMDSWGKIEAAL

Q9LG23 Pentatricopeptide repeat-containing protein At1g55890, mitochondrial1.3e-2428Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        ++ I++   K      EGF  R+I LY  +GM + A +  ++ + N+ C  S  S  A+LS Y  +   + V E+F  +P K+ + P +VS+N ++KA  
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRL---CKNKD-------------------YD
        +++ L  A   +DE+     K  P+I ++N  L + + KG     + I  ++ ++ +  D+ +YN R+L L    K+K+                   ++
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRL---CKNKD-------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVE--KTKKMLK
        A+I G  N G ++ A    K +++ G+  P    +  L+ +M K G+F+ A+E  +E   +R++     ++ LV  LV  SK EEA+E+V+  KT   LK
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVE--KTKKMLK

Q9LK58 Pentatricopeptide repeat-containing protein At3g131503.1e-2627.8Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQV-ILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAF
        +D ++Q   K     SE F IR+++LY  SGM + A +  D++  LN  C+ + KS  A+LS Y+N+   ++  + F+ +PEK+G+TP +V++N ++KA 
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQV-ILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAF

Query:  VQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------DY
         ++  ++   +  +EL K+  +  P++ S+N  L  ++ +   V  D I   +  + L  ++ SYN R+  L +NK                       Y
Subjt:  VQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------DY

Query:  DAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTK
        +A+I  Y    ++E   K    M E G ++P +  Y  LI  + K+G+ D A+E   E IK + +      + +V  L+   K++EA ++V+  K
Subjt:  DAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTK

Q9SAB4 Pentatricopeptide repeat-containing protein At1g11630, mitochondrial1.5e-2826.81Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRT---LDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLK
        +DG IQ+    P   SE F +R I+LY  + M+D++I+T   L+Q  + +    + KSL A+L   L     ++ + ++  +P+  G+ P + ++N +++
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRT---LDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLK

Query:  AFVQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------
           +     S+ + + E+ +   K  P   S+ + +  ++ +        +++ + + G+   + +YN  I  LCK K                      
Subjt:  AFVQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------

Query:  DYDAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKML
         Y  +IHG+ +  +++ A  + + M+ +G+  P S  Y++LI  + K G+F+ AL  CRE +++ WVP F  M+ LV GL   SKV+EAKE++   K+  
Subjt:  DYDAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKML

Query:  KGPAMDSWGKIEAALSL
            +D W ++EAAL L
Subjt:  KGPAMDSWGKIEAALSL

Arabidopsis top hitse value%identityAlignment
AT1G11630.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-2926.81Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRT---LDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLK
        +DG IQ+    P   SE F +R I+LY  + M+D++I+T   L+Q  + +    + KSL A+L   L     ++ + ++  +P+  G+ P + ++N +++
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRT---LDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLK

Query:  AFVQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------
           +     S+ + + E+ +   K  P   S+ + +  ++ +        +++ + + G+   + +YN  I  LCK K                      
Subjt:  AFVQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------

Query:  DYDAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKML
         Y  +IHG+ +  +++ A  + + M+ +G+  P S  Y++LI  + K G+F+ AL  CRE +++ WVP F  M+ LV GL   SKV+EAKE++   K+  
Subjt:  DYDAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKML

Query:  KGPAMDSWGKIEAALSL
            +D W ++EAAL L
Subjt:  KGPAMDSWGKIEAALSL

AT1G55890.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.1e-2628Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        ++ I++   K      EGF  R+I LY  +GM + A +  ++ + N+ C  S  S  A+LS Y  +   + V E+F  +P K+ + P +VS+N ++KA  
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRL---CKNKD-------------------YD
        +++ L  A   +DE+     K  P+I ++N  L + + KG     + I  ++ ++ +  D+ +YN R+L L    K+K+                   ++
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRL---CKNKD-------------------YD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVE--KTKKMLK
        A+I G  N G ++ A    K +++ G+  P    +  L+ +M K G+F+ A+E  +E   +R++     ++ LV  LV  SK EEA+E+V+  KT   LK
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVE--KTKKMLK

AT1G61870.1 pentatricopeptide repeat 3367.7e-3329.34Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRT---LDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLK
        +DG I++    P   SE F    I+LY+ + M+D ++R    L++  +++    + KSL A+L   L     ++   ++  +P+  G+ P + ++N ++K
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRT---LDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLK

Query:  AFVQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYW--NKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK--------------------
         F +     S+ + + E+ +   K  PN  S+ + +  ++  +K D VG   ++  +  RG+   + +YN RI  LCK K                    
Subjt:  AFVQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYW--NKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK--------------------

Query:  --DYDAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKK
           Y  +IHG+ N  D E A K+ K M+  G   P S  Y++LI  + K G+F+ AL  C+E +++ WVP F  M+ LV GL   SKVEEAKE++ + K+
Subjt:  --DYDAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKK

Query:  MLKGPAMDSWGKIEAAL
              ++ W ++EAAL
Subjt:  MLKGPAMDSWGKIEAAL

AT1G80150.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-2425.77Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV
        ++ +++     P    EGF +R+IMLY  +GM  QA+ T   + L   C  S KS  A L V   N     + E     P K G+    VS N+ +K+F 
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFV

Query:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------DYD
        +   L+ A   + E+ K  + + P++ +Y   + A +     V  +G+   +  +G + +L ++N RI  L   +                       Y+
Subjt:  QQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------DYD

Query:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVE
         +I G+      ++A +V  +M   G+  P+ +IY ++I  + K G FDLA   C++ ++++W P  + +E L++GLV   ++++AK ++E
Subjt:  AIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVE

AT3G13150.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-2727.8Show/hide
Query:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQV-ILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAF
        +D ++Q   K     SE F IR+++LY  SGM + A +  D++  LN  C+ + KS  A+LS Y+N+   ++  + F+ +PEK+G+TP +V++N ++KA 
Subjt:  MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQV-ILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAF

Query:  VQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------DY
         ++  ++   +  +EL K+  +  P++ S+N  L  ++ +   V  D I   +  + L  ++ SYN R+  L +NK                       Y
Subjt:  VQQNDLESARNWIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNK----------------------DY

Query:  DAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTK
        +A+I  Y    ++E   K    M E G ++P +  Y  LI  + K+G+ D A+E   E IK + +      + +V  L+   K++EA ++V+  K
Subjt:  DAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGCATCATTCAATCCCACCTCAAATCCCCCTTCGCCATTTCTGAAGGCTTCTGGATCCGCCTCATCATGCTCTACTCCAGCTCCGGTATGGTCGATCAAGCTAT
TCGCACTCTTGATCAGGTAATCCTGAACAAACCCTGCGATCTGTCAGAGAAATCGCTCTGTGCTGTTCTCTCTGTTTATCTCAACAATTCCATGCCTGAGAAGGTTCATG
AGATGTTTAGAACCATTCCGGAGAAAATTGGTGTTACTCCGACTGTGGTTTCGCACAATCTGGTGCTGAAGGCATTTGTTCAGCAAAACGATCTTGAATCGGCTCGGAAC
TGGATCGATGAGTTGTACAAGGATGATGCTAAGGTCGTCCCTAACATTGACTCGTACAATATCTTCTTAGGAGCTTACTGGAACAAAGGCGATTTGGTCGGATTCGACGG
GATTGTGAAGGAAATTTCAAAGAGAGGTTTGGAGTTCGATTTGGGTAGTTACAATTACAGGATTTTGAGGCTGTGCAAGAACAAGGACTATGATGCAATCATCCATGGCT
ACGGCAATGTTGGGGATATTGAATTGGCTACGAAAGTTCTGAAGAGTATGCTGGAGGATGGCCATGTCTCACCCAGTTCGCGAATCTATTATAGTTTGATTCGAAGCATG
GTTAAGGAGGGGGAGTTTGATTTGGCATTGGAGACATGTAGAGAGATCATAAAGAGGAGGTGGGTTCCTCCATTTGAGGCAATGGAGGGTCTGGTTCGTGGATTGGTGTG
TATATCAAAGGTTGAAGAGGCAAAAGAGGTTGTTGAAAAGACGAAGAAGATGCTCAAAGGACCTGCTATGGATTCGTGGGGGAAAATTGAAGCTGCTCTTTCGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGGCATCATTCAATCCCACCTCAAATCCCCCTTCGCCATTTCTGAAGGCTTCTGGATCCGCCTCATCATGCTCTACTCCAGCTCCGGTATGGTCGATCAAGCTAT
TCGCACTCTTGATCAGGTAATCCTGAACAAACCCTGCGATCTGTCAGAGAAATCGCTCTGTGCTGTTCTCTCTGTTTATCTCAACAATTCCATGCCTGAGAAGGTTCATG
AGATGTTTAGAACCATTCCGGAGAAAATTGGTGTTACTCCGACTGTGGTTTCGCACAATCTGGTGCTGAAGGCATTTGTTCAGCAAAACGATCTTGAATCGGCTCGGAAC
TGGATCGATGAGTTGTACAAGGATGATGCTAAGGTCGTCCCTAACATTGACTCGTACAATATCTTCTTAGGAGCTTACTGGAACAAAGGCGATTTGGTCGGATTCGACGG
GATTGTGAAGGAAATTTCAAAGAGAGGTTTGGAGTTCGATTTGGGTAGTTACAATTACAGGATTTTGAGGCTGTGCAAGAACAAGGACTATGATGCAATCATCCATGGCT
ACGGCAATGTTGGGGATATTGAATTGGCTACGAAAGTTCTGAAGAGTATGCTGGAGGATGGCCATGTCTCACCCAGTTCGCGAATCTATTATAGTTTGATTCGAAGCATG
GTTAAGGAGGGGGAGTTTGATTTGGCATTGGAGACATGTAGAGAGATCATAAAGAGGAGGTGGGTTCCTCCATTTGAGGCAATGGAGGGTCTGGTTCGTGGATTGGTGTG
TATATCAAAGGTTGAAGAGGCAAAAGAGGTTGTTGAAAAGACGAAGAAGATGCTCAAAGGACCTGCTATGGATTCGTGGGGGAAAATTGAAGCTGCTCTTTCGCTGTAG
Protein sequenceShow/hide protein sequence
MDGIIQSHLKSPFAISEGFWIRLIMLYSSSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPTVVSHNLVLKAFVQQNDLESARN
WIDELYKDDAKVVPNIDSYNIFLGAYWNKGDLVGFDGIVKEISKRGLEFDLGSYNYRILRLCKNKDYDAIIHGYGNVGDIELATKVLKSMLEDGHVSPSSRIYYSLIRSM
VKEGEFDLALETCREIIKRRWVPPFEAMEGLVRGLVCISKVEEAKEVVEKTKKMLKGPAMDSWGKIEAALSL