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CmoCh14G005880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G005880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box protein CPR30-like
Genome locationCmo_Chr14:2994561..2994953
RNA-Seq ExpressionCmoCh14G005880
SyntenyCmoCh14G005880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580857.1 40S ribosomal protein S2-3, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1066.07Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPR
        VSWSKL+TIGPL+GI+KPL FVGS+ LLMEA EG V+LYN      R++PIKG  R
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPR

KAG6580959.1 F-box protein CPR1, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1262.12Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPRSVSSYSSYYF
        VSWSKL+TIGPLFGI KPL FVGSN LLME++EG VVLYN     +RELP+KG P    +  +  F
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPRSVSSYSSYYF

XP_022935111.1 F-box/kelch-repeat protein At3g23880-like [Cucurbita moschata]5.0e-1066.07Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYNIR-----ELPIKGAPR
        VSWSKL+TIGPL+GI+KPL FVGS+ LLMEA EG V+LYN R     ++PIKG  R
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYNIR-----ELPIKGAPR

XP_022935691.1 F-box protein CPR30-like [Cucurbita moschata]5.4e-1262.12Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPRSVSSYSSYYF
        VSWSKL+TIGPLFGI KPL FVGSN LLME++EG VVLYN     +RELP+KG P    +  +  F
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPRSVSSYSSYYF

XP_022983805.1 F-box protein CPR1-like [Cucurbita maxima]1.1e-0967.27Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAP
        VSWSKL+TIGPL GI+KPL FV S+ LLMEA EG +VLYN     ++ELPIKG P
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAP

TrEMBL top hitse value%identityAlignment
A0A6J1F3M5 F-box/kelch-repeat protein At3g23880-like2.4e-1066.07Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYNIR-----ELPIKGAPR
        VSWSKL+TIGPL+GI+KPL FVGS+ LLMEA EG V+LYN R     ++PIKG  R
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYNIR-----ELPIKGAPR

A0A6J1F5F2 F-box protein CPR30-like2.6e-1262.12Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPRSVSSYSSYYF
        VSWSKL+TIGPLFGI KPL FVGSN LLME++EG VVLYN     +RELP+KG P    +  +  F
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPRSVSSYSSYYF

A0A6J1G1S8 F-box protein CPR30-like2.7e-0950Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYNIRE-----LPIKGAPRSVSSYSSYYFCGEYDI-DFIQNHL
        VSWSKL+ IGP+FG+ KPL FV S+ LLM+A EG V+ YNI+      LPIKG P   S Y + YF  ++D+ D  ++H+
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYNIRE-----LPIKGAPRSVSSYSSYYFCGEYDI-DFIQNHL

A0A6J1J5F7 F-box/kelch-repeat protein At3g23880-like5.4e-1066.07Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPR
        VSWSKL+TIGPL+GI+KPL FVGS+ LLMEA  G V+LYN      R+LPIKG  R
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAPR

A0A6J1J6Y5 F-box protein CPR1-like5.4e-1067.27Show/hide
Query:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAP
        VSWSKL+TIGPL GI+KPL FV S+ LLMEA EG +VLYN     ++ELPIKG P
Subjt:  VSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYN-----IRELPIKGAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGGTGGGTTTCATGGTCAAAGCTGATTACAATTGGGCCTCTTTTTGGAATTGATAAGCCATTAGCGTTTGTGGGTTCTAATTTACTCTTAATGGAAGCAATGGA
AGGGCATGTGGTTTTGTACAATATTCGAGAGCTTCCCATAAAAGGGGCACCCAGAAGTGTTTCAAGCTACTCAAGCTACTACTTTTGTGGAGAGTATGATATCGATTTTA
TACAAAATCATCTGCTTCCTTACACAAAACCTCAGTGTGATTTTGGAACTAAACTAATGATCGATGATAATAACAAGATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTGGTGGGTTTCATGGTCAAAGCTGATTACAATTGGGCCTCTTTTTGGAATTGATAAGCCATTAGCGTTTGTGGGTTCTAATTTACTCTTAATGGAAGCAATGGA
AGGGCATGTGGTTTTGTACAATATTCGAGAGCTTCCCATAAAAGGGGCACCCAGAAGTGTTTCAAGCTACTCAAGCTACTACTTTTGTGGAGAGTATGATATCGATTTTA
TACAAAATCATCTGCTTCCTTACACAAAACCTCAGTGTGATTTTGGAACTAAACTAATGATCGATGATAATAACAAGATCTAG
Protein sequenceShow/hide protein sequence
MIWWVSWSKLITIGPLFGIDKPLAFVGSNLLLMEAMEGHVVLYNIRELPIKGAPRSVSSYSSYYFCGEYDIDFIQNHLLPYTKPQCDFGTKLMIDDNNKI