CuGenDBv2

Gene ID	CmoCh14G007090
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	DUF1713 domain-containing protein
Genome location	Cmo_Chr14:3644088..3647832
RNA-Seq Expression	CmoCh14G007090
Synteny	CmoCh14G007090
Gene Ontology terms	GO:0006397 - mRNA processing (biological process)
InterPro domains	IPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581076.1 hypothetical protein SDJN03_21078, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-56

61.4

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEP+FVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQTYCYTGPSTYSMYFVNPEPSEPSKEICEAKSRFSAIDRGHVSSSHHYNKKGESFSNTRAVDQDGADGTSEV
        LWADS                                                   +  + F                         AVDQDGADGTSEV
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQTYCYTGPSTYSMYFVNPEPSEPSKEICEAKSRFSAIDRGHVSSSHHYNKKGESFSNTRAVDQDGADGTSEV

Query:  RKSSFSTPSSTNRYM
        RKSSFSTPSSTNRY+
Subjt:  RKSSFSTPSSTNRYM

KAG7017804.1 hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-64

99.23

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEP+FVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

XP_022934588.1 uncharacterized protein LOC111441723 [Cucurbita moschata]

6.3e-65

100

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

XP_022984015.1 uncharacterized protein LOC111482461 [Cucurbita maxima]

2.5e-61

96.15

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MASMLQKLVRKS PTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTS+ SHF LFYPSFPFGFCLPQISSSGMLPFEP+FVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

XP_023526336.1 uncharacterized protein LOC111789858 [Cucurbita pepo subsp. pepo]

4.1e-64

98.46

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEP+FVEQD+SRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDP0 DUF1713 domain-containing protein

2.2e-55

86.92

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSNPSHFS FYPSFPFG CLPQISS+G+LPFEP+ VEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

A0A5A7UNU9 DUF1713 domain-containing protein

2.7e-53

85.38

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MASMLQKL+RKSPP+RLIAALG QTSQN   P+ILHQPLDFDKK D H  SNLNS STSNPS FS FYPSFPFG CLPQISS+G+LPFEP++VEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

A0A6J1EJL0 uncharacterized protein LOC111435191

1.9e-51

82.31

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MAS+LQKL+RKSPPTR IAAL +QTSQN   PYILHQPLD D+KPD HCDSNLN+VSTSNPS FSLF+PSFPFG CL QISS+G + FEP++VE DDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

A0A6J1F832 uncharacterized protein LOC111441723

3.1e-65

100

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

A0A6J1J7I5 uncharacterized protein LOC111482461

1.2e-61

96.15

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK
        MASMLQKLVRKS PTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTS+ SHF LFYPSFPFGFCLPQISSSGMLPFEP+FVEQDDSRK
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G63150.1 unknown protein

1.3e-07

34.78

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Query:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFD---KKPDRHCDSN-LNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFV--E
        MA+++ + +R       I  L T  S    +    +   + D   +KPD    +N L ++S +  +    FYPSF  G CL      G+   E   +  E
Subjt:  MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFD---KKPDRHCDSN-LNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFV--E

Query:  QDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        ++D+++  ++ADSVKKKRK+KMNKHKY+KLRK+L R++
Subjt:  QDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

Sequences

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CDS sequence

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ATGGCGTCGATGCTTCAAAAGCTCGTCAGAAAATCGCCACCAACAAGACTAATTGCTGCTTTGGGTACACAGACCTCACAAAATCCCTTAAAACCCTACATTCTTCACCA
GCCGCTTGATTTTGATAAGAAACCAGATCGGCATTGCGATTCTAATTTGAACTCTGTTTCTACTTCGAATCCATCTCACTTTTCCCTGTTTTACCCTAGTTTTCCATTTG
GGTTTTGCTTGCCGCAAATCTCCTCATCTGGGATGCTTCCGTTCGAGCCCGAGTTTGTTGAACAAGATGATTCTAGGAAATTGTGGGCCGATAGCGTGAAGAAGAAGAGG
AAACGGAAGATGAACAAGCATAAGTACAAGAAGCTTAGGAAGCGACTCCGAAGACAGACTTACTGTTACACCGGACCATCGACGTACTCGATGTATTTTGTAAACCCTGA
ACCTTCAGAACCAAGCAAAGAAATCTGTGAGGCAAAGTCCAGATTCTCTGCCATTGATAGGGGACATGTCTCATCATCCCATCACTACAACAAAAAAGGAGAGTCATTTT
CAAACACAAGAGCAGTTGATCAGGATGGAGCTGATGGGACCTCAGAGGTCAGGAAGAGTTCTTTTTCCACCCCTTCATCGACGAATCGATATATGAAAGAGGAAGAACAT
GAGAGCCATGATATGGTTGGAGCCAAATGGCAATGCCCATTTCTTGACCAAATTAAGCATCAGCAGAGAGCTGTGCGTCCTCCATTATTCCCTTTCACTCAGAGTACAGA
ATTCTGA

mRNA sequence

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Protein sequence

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MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSNPSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRKLWADSVKKKR
KRKMNKHKYKKLRKRLRRQTYCYTGPSTYSMYFVNPEPSEPSKEICEAKSRFSAIDRGHVSSSHHYNKKGESFSNTRAVDQDGADGTSEVRKSSFSTPSSTNRYMKEEEH
ESHDMVGAKWQCPFLDQIKHQQRAVRPPLFPFTQSTEF

CmoCh14G007090 (gene) of Cucurbita moschata (Rifu) v1 genome