; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G007640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G007640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionC2H2-like zinc finger protein
Genome locationCmo_Chr14:3876248..3876745
RNA-Seq ExpressionCmoCh14G007640
SyntenyCmoCh14G007640
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581122.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7990.56Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP---TTTTTHHHLPQ
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP   TTTTTHHHLPQ
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP---TTTTTHHHLPQ

Query:  PYTVAPSPTPTP----TPAPADFLGQHWFNQNHYSANTTTT--------ASASASASPDALSPNADTAVEHVTIDLTLRL
        PYTVAP+PTP P    TPAPADFLGQHWFNQNHYSANTTTT        ASASASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  PYTVAPSPTPTP----TPAPADFLGQHWFNQNHYSANTTTT--------ASASASASPDALSPNADTAVEHVTIDLTLRL

KAG7017856.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-8093.14Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP---TTTTTHHHLPQ
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP   TTTTTHHHLPQ
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP---TTTTTHHHLPQ

Query:  PYTVAPSPTPTP----TPAPADFLGQHWFNQNHYSANTTTT---ASASASASPDALSPNADTAVEHVTIDLTLRL
        PYTVAP+PTP P    TPAPADFLGQHWFNQNHYSANTTTT   ASASASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  PYTVAPSPTPTP----TPAPADFLGQHWFNQNHYSANTTTT---ASASASASPDALSPNADTAVEHVTIDLTLRL

XP_022934585.1 protein LATE FLOWERING-like [Cucurbita moschata]5.4e-86100Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT

Query:  VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL
        VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL

XP_022983390.1 protein LATE FLOWERING-like [Cucurbita maxima]3.5e-7793.94Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL PP P TTT THHHLPQPYT
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT

Query:  VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL
        VAP+  PTPTPAPADFLGQHWFNQNHYSANTTTT +ASASASPDALSPN DTAVEHVTIDLTLRL
Subjt:  VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL

XP_023529006.1 protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]3.0e-7690.64Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
        MADPAIYDFLTQTTTASNSA KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPP  TT HHHLPQPYT
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT

Query:  VAPSPTPTP----TPAPADFLGQHWFNQNHYSAN--TTTTASASASASPDALSPNADTAVEHVTIDLTLRL
        V P+PTPTP    TPAPADFLGQHWFNQNHYSAN  TTTT + +ASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  VAPSPTPTP----TPAPADFLGQHWFNQNHYSAN--TTTTASASASASPDALSPNADTAVEHVTIDLTLRL

TrEMBL top hitse value%identityAlignment
A0A6J1DQT0 zinc finger protein 65.9e-3864.29Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
        MADPAIYDFL+QTTT     PK SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK F S++LH        PP     HH L  P  
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT

Query:  VAPSPTPTPTPA-PADFLGQHW--FNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL
          P P P+ +PA  A FL +HW   +QNH+ A     A +SAS   DALSPNAD AVE+VTIDLTLRL
Subjt:  VAPSPTPTPTPA-PADFLGQHW--FNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL

A0A6J1EJQ6 protein LATE FLOWERING-like6.1e-5172.35Show/hide
Query:  MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL----PPPPPPTTTTTHHHL
        MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL    PPPPPP   TT+HHL
Subjt:  MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL----PPPPPPTTTTTHHHL

Query:  PQPYTVAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL
          P T A         AP+    +HWF+QN++   TTTT    ASASP+ LSPNAD AVEHVTIDLTLRL
Subjt:  PQPYTVAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL

A0A6J1F843 protein LATE FLOWERING-like2.6e-86100Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT

Query:  VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL
        VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL
Subjt:  VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL

A0A6J1J5R2 protein LATE FLOWERING-like1.7e-7793.94Show/hide
Query:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
        MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL PP P TTT THHHLPQPYT
Subjt:  MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT

Query:  VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL
        VAP+  PTPTPAPADFLGQHWFNQNHYSANTTTT +ASASASPDALSPN DTAVEHVTIDLTLRL
Subjt:  VAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL

A0A6J1JQI7 protein LATE FLOWERING-like6.1e-5172.35Show/hide
Query:  MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL----PPPPPPTTTTTHHHL
        MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK F SEILHLGSL    PPPPPP   TT+HHL
Subjt:  MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSL----PPPPPPTTTTTHHHL

Query:  PQPYTVAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL
          P   A         AP+    +HWF+QN++   TTTT  ASASASP+ LSPNAD AVEHVTIDLTLRL
Subjt:  PQPYTVAPSPTPTPTPAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL

SwissProt top hitse value%identityAlignment
Q39263 Zinc finger protein 45.6e-0951.67Show/hide
Query:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L  ++T+ +S P+  ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Q39266 Zinc finger protein 71.1e-0947.83Show/hide
Query:  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
        ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +           HHH P  YT
Subjt:  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT

Q42485 Zinc finger protein 11.2e-0845.83Show/hide
Query:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLP
        L  +   S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++    + + L SLP
Subjt:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLP

Q9FFX4 Zinc finger protein KNUCKLES1.2e-1151.22Show/hide
Query:  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPP
        P+   F+    T S S+ + S    +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L   PP
Subjt:  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPP

Q9FKA9 Protein LATE FLOWERING3.3e-0944.9Show/hide
Query:  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILHLGSLPPPPPPTTTTTHHHL-----PQPYTVAPSPTPTP
        K + K     SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A     F +    L +L   P   ++ + HHL     P   +VA  PT  P
Subjt:  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILHLGSLPPPPPPTTTTTHHHL-----PQPYTVAPSPTPTP

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 78.0e-1147.83Show/hide
Query:  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT
        ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +           HHH P  YT
Subjt:  SSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYT

AT1G66140.1 zinc finger protein 44.0e-1051.67Show/hide
Query:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L  ++T+ +S P+  ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

AT1G80730.1 zinc-finger protein 18.8e-1045.83Show/hide
Query:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLP
        L  +   S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++    + + L SLP
Subjt:  LTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLP

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein8.5e-1351.22Show/hide
Query:  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPP
        P+   F+    T S S+ + S    +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L   PP
Subjt:  PAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPP

AT5G48890.1 C2H2-like zinc finger protein2.3e-1044.9Show/hide
Query:  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILHLGSLPPPPPPTTTTTHHHL-----PQPYTVAPSPTPTP
        K + K     SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A     F +    L +L   P   ++ + HHL     P   +VA  PT  P
Subjt:  KASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA-----FASEILHLGSLPPPPPPTTTTTHHHL-----PQPYTVAPSPTPTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACCCAGCCATTTACGACTTCCTTACCCAAACAACAACCGCTTCAAATTCTGCACCAAAAGCTTCCAGAAAGTTCCAGTCTCAATACTCTTCCTCTCGCATTTT
TCCATGCCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAACGCTCACAAGAGAGAAAGAGCCGCCTCTCGTAAGGCTTTCGCCTCTGAAA
TTCTTCATCTCGGTTCGCTTCCGCCGCCGCCGCCGCCGACGACGACGACGACTCACCACCATCTTCCGCAGCCTTACACGGTTGCTCCATCTCCGACTCCGACTCCGACT
CCGGCTCCGGCTGATTTTCTCGGCCAGCATTGGTTTAATCAGAATCACTACAGTGCTAACACCACCACCACTGCCTCCGCCTCCGCCTCCGCCTCGCCGGATGCTCTCTC
TCCGAACGCCGATACCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACCCAGCCATTTACGACTTCCTTACCCAAACAACAACCGCTTCAAATTCTGCACCAAAAGCTTCCAGAAAGTTCCAGTCTCAATACTCTTCCTCTCGCATTTT
TCCATGCCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGCCACCAAAACGCTCACAAGAGAGAAAGAGCCGCCTCTCGTAAGGCTTTCGCCTCTGAAA
TTCTTCATCTCGGTTCGCTTCCGCCGCCGCCGCCGCCGACGACGACGACGACTCACCACCATCTTCCGCAGCCTTACACGGTTGCTCCATCTCCGACTCCGACTCCGACT
CCGGCTCCGGCTGATTTTCTCGGCCAGCATTGGTTTAATCAGAATCACTACAGTGCTAACACCACCACCACTGCCTCCGCCTCCGCCTCCGCCTCGCCGGATGCTCTCTC
TCCGAACGCCGATACCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA
Protein sequenceShow/hide protein sequence
MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYTVAPSPTPTPT
PAPADFLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL