CuGenDBv2

Gene ID	CmoCh14G007860
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Chalcone synthase
Genome location	Cmo_Chr14:4004951..4005382
RNA-Seq Expression	CmoCh14G007860
Synteny	CmoCh14G007860
Gene Ontology terms	GO:0009813 - flavonoid biosynthetic process (biological process) GO:0030639 - polyketide biosynthetic process (biological process) GO:0090378 - seed trichome elongation (biological process) GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domains	IPR001099 - Chalcone/stilbene synthase, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

ABE01413.1 chalcone synthase [Anthurium andraeanum]

2.7e-05

56.67

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKRHMYL EEILKENPNMC + +P LDARQDM+     +    A TR  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

AGT18082.1 chalcone synthase, partial [Anthurium curvispadix]

2.7e-05

56.67

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKRHMYL EEILKENPNMC + +P LDARQDM+     +    A TR  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

AGT18097.1 chalcone synthase, partial [Anthurium harrisii]

5.9e-05

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        M+KKRHMYL EEILKENPNMC + +P LDARQDML     +    A  R  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

AGT18122.1 chalcone synthase, partial [Anthurium parasiticum]

9.1e-06

58.33

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKRHMYL EEILKENPNMC H +P LDARQDML     +    A  R  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

AGT18128.1 chalcone synthase, partial [Anthurium pedatum]

2.7e-05

56.67

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKRHMYL EEILKENPNMCE+ +P LDARQDM+     +    A  R  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

TrEMBL top hits

e value

%identity

Alignment

U3M5I8 Chalcone synthase (Fragment)

1.3e-05

56.67

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKRHMYL EEILKENPNMC + +P LDARQDM+     +    A TR  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

U3M5U1 Chalcone synthase (Fragment)

1.3e-05

56.67

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKRHMYL EEILKENPNMC + +P LDARQDM+     +    A TR  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

U3M659 Chalcone synthase (Fragment)

1.3e-05

56.67

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKRHMYL EEILKENPNMCE+ +P LDARQDM+     +    A  R  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

U3M6J9 Chalcone synthase (Fragment)

4.4e-06

58.33

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKRHMYL EEILKENPNMC H +P LDARQDML     +    A  R  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

U3M6K6 Chalcone synthase (Fragment)

1.3e-05

56.67

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKRHMYL EEILKENPNMCE+ +P LDARQDM+     +    A  R  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

SwissProt top hits

e value

%identity

Alignment

B0LDU5 Polyketide synthase 4

1.3e-07

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDM----LWKCQSSAKTRDFKGYGGSKTR
        MIKKR+MYL EEILKENP+MCE+ +P LDARQDM    + K    A T+  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDM----LWKCQSSAKTRDFKGYGGSKTR

B0LDU6 Polyketide synthase 5

1.3e-07

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDM----LWKCQSSAKTRDFKGYGGSKTR
        MIKKR+MYL EEILKENP+MCE+ +P LDARQDM    + K    A T+  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDM----LWKCQSSAKTRDFKGYGGSKTR

P23569 Chalcone synthase

1.7e-07

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKR+MYL EEILKENPNMC + +P LDARQDM+     K    A T+  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

P48386 Chalcone synthase 1

5.0e-07

53.33

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        MIKKR+MYL EEILKENP +CE+ +P LDARQDM+     K    A T+  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

Q9AU11 Polyketide synthase 1

1.3e-07

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Query:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDM----LWKCQSSAKTRDFKGYGGSKTR
        MIKKR+MYL EEILKENP+MCE+ +P LDARQDM    + K    A T+  K +G  K++
Subjt:  MIKKRHMYLIEEILKENPNMCEH-SPFLDARQDM----LWKCQSSAKTRDFKGYGGSKTR

Arabidopsis top hits

e value

%identity

Alignment

AT5G13930.1 Chalcone and stilbene synthase family protein

2.8e-05

44.07

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Query:  IKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR
        I+KRHM+L EE LKENP+MC + +P LD RQD++     K    A  +  K +G  K++
Subjt:  IKKRHMYLIEEILKENPNMCEH-SPFLDARQDMLW----KCQSSAKTRDFKGYGGSKTR

Sequences

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CDS sequence

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ATGATCAAGAAGCGCCACATGTACTTAATTGAGGAAATTCTTAAAGAGAATCCAAATATGTGCGAGCACTCACCTTTTCTAGACGCGCGTCAGGATATGTTGTGGAAGTG
CCAAAGCTCGGCAAAGACGAGAGATTTTAAGGGATACGGTGGAAGCAAAACTAGGTCTAAAGGAGGAGAAGATGAAGACAAGTCGAGAGATTTTAAGGAAGTACGGGAAC
ATGTCGAGCTCGTGCGTTGCTTTTATAACGGATCAAATAAGGAAAAACTCTCTAAAAGAATGAGCTTCAACAACTGGAGAAGGGCTCGAATGGGGAGTTTTGATCGGGTT
TGGCCCAGGACTGACAGTAGAGACAGTAATGCTACATAG

mRNA sequence

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Protein sequence

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MIKKRHMYLIEEILKENPNMCEHSPFLDARQDMLWKCQSSAKTRDFKGYGGSKTRSKGGEDEDKSRDFKEVREHVELVRCFYNGSNKEKLSKRMSFNNWRRARMGSFDRV
WPRTDSRDSNAT

CmoCh14G007860 (gene) of Cucurbita moschata (Rifu) v1 genome