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CmoCh14G008090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G008090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHomeobox Hox-B3-like protein
Genome locationCmo_Chr14:4172319..4172912
RNA-Seq ExpressionCmoCh14G008090
SyntenyCmoCh14G008090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581162.1 hypothetical protein SDJN03_21164, partial [Cucurbita argyrosperma subsp. sororia]1.2e-8796.2Show/hide
Query:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
        MADKFHQNSTADYPISL LTAEIFSMERGPRYRAYAELRESKLRLRNALY D+EQPEKPTPP KKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
Subjt:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVK
         PGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAG KRVGRLTDVRKSYAGFEEVK LTTAAANSINGENRGRRGKTVLGVK
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVK

KAG7017899.1 hypothetical protein SDJN02_19765, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-8895.65Show/hide
Query:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
        MADKFHQNSTADYPISL LTAEIFSMERGPRYRAYAELRESKLRLRN+LY D+EQPEKPTPP KKQVKFMGLETVKKRSAAVAQSVPDFS VLRKENRKP
Subjt:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVK
        PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAG KRVGRLTDVRKSYAGFEEVK LTTAAANSINGENRGRRGKTVLGVK
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVK

XP_022934584.1 uncharacterized protein LOC111441720 [Cucurbita moschata]1.9e-101100Show/hide
Query:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
        MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
Subjt:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVKTDLKQNHFKNREF
        PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVKTDLKQNHFKNREF
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVKTDLKQNHFKNREF

XP_022983943.1 uncharacterized protein LOC111482410 [Cucurbita maxima]1.7e-8695.08Show/hide
Query:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
        MADKFHQNSTADYPISL LTAEIFSMERGPRYRAYAELRESKLRLRNALYRD+EQPEKPTPP KKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
Subjt:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGV
        PPGLSPVMEMTPPGKT GKNIAGLSAN +G KSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR  RGKTVLGV
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGV

XP_038903179.1 uncharacterized protein LOC120089840 [Benincasa hispida]8.2e-7383.06Show/hide
Query:  HQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKPPPGLS
        HQNS AD PISL+LTAE FSMERGPRYRAYAELRESKLRLRNA+YRD EQPEK TPP KKQVKF+  ET++KRSAAVAQSVPDFSAVLRKENRKPPPGLS
Subjt:  HQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKPPPGLS

Query:  PVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR----GRRGKTVLGVK
        PVMEMTPPGKT GK I GLS NS+GSKSASAGEKR G LT VRKSYAGFEE+KG +TAAAN+INGENR    GRRGKTVLG++
Subjt:  PVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR----GRRGKTVLGVK

TrEMBL top hitse value%identityAlignment
A0A0A0L9P8 Uncharacterized protein4.9e-7182.97Show/hide
Query:  HQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKPPPG-L
        HQNS AD+PISL LT E FSMERGPRYRAYAELRESKLRLRNA+YR +E PEK TPP KKQVKF+G ETV+KRSA VAQSVPDFSAVLRKENRKPPPG L
Subjt:  HQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKPPPG-L

Query:  SPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR--GRRGKTVLGVK
        SPVMEMTPPGKT GKNI GLS  S+GSKSASAGEKR G LT VRKSYAGFEE+KG +TAAAN+INGENR  GRRGKTVLGV+
Subjt:  SPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR--GRRGKTVLGVK

A0A6J1F314 uncharacterized protein LOC1114417209.1e-102100Show/hide
Query:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
        MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
Subjt:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVKTDLKQNHFKNREF
        PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVKTDLKQNHFKNREF
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVKTDLKQNHFKNREF

A0A6J1GA97 uncharacterized protein LOC1114522042.3e-6878.8Show/hide
Query:  HQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKPPPGLS
        HQNS   +   L+LTAE FSMERGPRYRAYAELRESKLRLRNA+YRD EQPEK TPP KKQV+F+G ETV+KRSA VAQSVPDFSAVLRKENR+PPPGLS
Subjt:  HQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKPPPGLS

Query:  PVMEMTPPGKTPGK-NIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR----GRRGKTVLGVK
        PVMEMTPPGKT GK NI G+SANS+GSKSASAGEKR G L   RKSYAGFEE+KG +TAAAN+INGEN+    GRRGKTVLGV+
Subjt:  PVMEMTPPGKTPGK-NIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR----GRRGKTVLGVK

A0A6J1J952 uncharacterized protein LOC1114824108.3e-8795.08Show/hide
Query:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
        MADKFHQNSTADYPISL LTAEIFSMERGPRYRAYAELRESKLRLRNALYRD+EQPEKPTPP KKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP
Subjt:  MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKP

Query:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGV
        PPGLSPVMEMTPPGKT GKNIAGLSAN +G KSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR  RGKTVLGV
Subjt:  PPGLSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGV

A0A6J1KFU5 uncharacterized protein LOC1114928441.9e-6777.6Show/hide
Query:  HQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKPPPGLS
        HQNS   +   L+LTAE FSMERGPRYRAYAELRESKLRLRN++YRD EQPEK TPP KKQV+F+G ETV+KRSA VAQSVPDFS+VLRKEN++PPPGLS
Subjt:  HQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKPPPGLS

Query:  PVMEMTPPGKTPGK-NIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR---GRRGKTVLGVK
        PVMEMTPPGKT GK NI G+SANS+GSKSASAGEKR G L   RKSYAGFEE+KG +TAAAN+INGEN+   GRRGKTVLGV+
Subjt:  PVMEMTPPGKTPGK-NIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENR---GRRGKTVLGVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67035.1 unknown protein4.3e-1136.31Show/hide
Query:  FHQNSTADYPISLRLTAE--IFSMERGPRYRAYAELRESKLRL-------------RNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDF
        F  N  +D    L+L  +   +  ERG RY  YA LRESKLR+             R    R+ E    P   T+        +T    S+++AQSVPDF
Subjt:  FHQNSTADYPISLRLTAE--IFSMERGPRYRAYAELRESKLRL-------------RNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDF

Query:  SAVLRKENRKPPPG---LSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGR
        S+++RKENR+PP     L    E+TPP            +  +GS SASAGEK+ GR
Subjt:  SAVLRKENRKPPPG---LSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKRVGR

AT1G67035.2 unknown protein1.3e-1536.65Show/hide
Query:  FHQNSTADYPISLRLTAE--IFSMERGPRYRAYAELRESKLRL-------------RNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDF
        F  N  +D    L+L  +   +  ERG RY  YA LRESKLR+             R    R+ E    P   T+        +T    S+++AQSVPDF
Subjt:  FHQNSTADYPISLRLTAE--IFSMERGPRYRAYAELRESKLRL-------------RNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDF

Query:  SAVLRKENRKPPPG---LSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKR-VGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRR
        S+++RKENR+PP     L    E+TPP            +  +GS SASAGEK+ +G +   RKSYA  +++K ++ AAA++ING    RR
Subjt:  SAVLRKENRKPPPG---LSPVMEMTPPGKTPGKNIAGLSANSKGSKSASAGEKR-VGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRR

AT5G38300.1 unknown protein8.0e-1835.62Show/hide
Query:  LRLTAEIFS-MERGPRYRAYAELRESKLRLRNALYR------------------------DNEQPEKPTPPTKKQVKFMGL-----------ETVKKRS-
        L+L  + FS  ERGPRY  Y+ LRESKLR++    +                        ++++ +K +P  KKQ +F G+           E VKK+S 
Subjt:  LRLTAEIFS-MERGPRYRAYAELRESKLRLRNALYR------------------------DNEQPEKPTPPTKKQVKFMGL-----------ETVKKRS-

Query:  -----------AAVAQSVPDFSAVLRKENRKPPPGLSPVMEMTPPGKTPGKNIAGL--SANSKGSKSASAGEKR---VGRLTDVRKSYAGFEEVKGLTTA
                   +++AQSVPDFSAV+RKENR+P      +  +TPP  T      G+   + S+GSKSASAGEK+   +  +   RKSYA  E++K ++ A
Subjt:  -----------AAVAQSVPDFSAVLRKENRKPPPGLSPVMEMTPPGKTPGKNIAGL--SANSKGSKSASAGEKR---VGRLTDVRKSYAGFEEVKGLTTA

Query:  AANSINGENRGRRGKTVLG
        AA++ING   G  G   +G
Subjt:  AANSINGENRGRRGKTVLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATAAATTCCACCAGAACTCCACCGCCGATTACCCAATTTCTCTCCGTCTCACGGCGGAGATTTTTTCCATGGAAAGAGGCCCGAGGTACAGAGCCTACGCAGA
GCTCAGAGAATCCAAGCTCCGGCTGAGAAACGCACTGTACCGCGACAACGAACAGCCAGAAAAGCCCACGCCGCCGACGAAGAAGCAAGTTAAATTTATGGGTTTGGAGA
CCGTAAAGAAAAGGTCAGCGGCGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTACTGAGGAAGGAGAACAGAAAGCCACCGCCGGGATTGTCGCCGGTGATGGAGATG
ACACCACCAGGGAAGACGCCGGGGAAAAACATTGCCGGATTGTCGGCGAATTCGAAAGGGAGTAAGTCGGCTAGTGCAGGGGAAAAAAGGGTCGGCAGATTGACCGACGT
GAGGAAGAGCTACGCCGGATTTGAGGAGGTGAAGGGGCTTACAACGGCGGCGGCGAACTCCATTAATGGCGAAAACAGAGGAAGGAGAGGGAAAACTGTATTGGGAGTTA
AAACAGATTTGAAACAAAATCATTTCAAGAACAGAGAGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATAAATTCCACCAGAACTCCACCGCCGATTACCCAATTTCTCTCCGTCTCACGGCGGAGATTTTTTCCATGGAAAGAGGCCCGAGGTACAGAGCCTACGCAGA
GCTCAGAGAATCCAAGCTCCGGCTGAGAAACGCACTGTACCGCGACAACGAACAGCCAGAAAAGCCCACGCCGCCGACGAAGAAGCAAGTTAAATTTATGGGTTTGGAGA
CCGTAAAGAAAAGGTCAGCGGCGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTACTGAGGAAGGAGAACAGAAAGCCACCGCCGGGATTGTCGCCGGTGATGGAGATG
ACACCACCAGGGAAGACGCCGGGGAAAAACATTGCCGGATTGTCGGCGAATTCGAAAGGGAGTAAGTCGGCTAGTGCAGGGGAAAAAAGGGTCGGCAGATTGACCGACGT
GAGGAAGAGCTACGCCGGATTTGAGGAGGTGAAGGGGCTTACAACGGCGGCGGCGAACTCCATTAATGGCGAAAACAGAGGAAGGAGAGGGAAAACTGTATTGGGAGTTA
AAACAGATTTGAAACAAAATCATTTCAAGAACAGAGAGTTTTGA
Protein sequenceShow/hide protein sequence
MADKFHQNSTADYPISLRLTAEIFSMERGPRYRAYAELRESKLRLRNALYRDNEQPEKPTPPTKKQVKFMGLETVKKRSAAVAQSVPDFSAVLRKENRKPPPGLSPVMEM
TPPGKTPGKNIAGLSANSKGSKSASAGEKRVGRLTDVRKSYAGFEEVKGLTTAAANSINGENRGRRGKTVLGVKTDLKQNHFKNREF