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CmoCh14G008140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G008140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosomal_L2_C domain-containing protein
Genome locationCmo_Chr14:4202970..4203933
RNA-Seq ExpressionCmoCh14G008140
SyntenyCmoCh14G008140
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM96664.1 hypothetical protein AMTR_s00001p00272570 [Amborella trichopoda]3.5e-0873.47Show/hide
Query:  NLLIAPYEFTMEKLRFVVRSLKEGLVINLESLLQHENEDFREEILDREE
        N LI+P+EFTMEK+ FVVR+LKE LVINLESLL H NED RE+ LD EE
Subjt:  NLLIAPYEFTMEKLRFVVRSLKEGLVINLESLLQHENEDFREEILDREE
TrEMBL top hitse value%identityAlignment
W1NMZ2 Ribosomal_L2_C domain-containing protein1.7e-0873.47Show/hide
Query:  NLLIAPYEFTMEKLRFVVRSLKEGLVINLESLLQHENEDFREEILDREE
        N LI+P+EFTMEK+ FVVR+LKE LVINLESLL H NED RE+ LD EE
Subjt:  NLLIAPYEFTMEKLRFVVRSLKEGLVINLESLLQHENEDFREEILDREE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTTACCATATTGTCGGGCGACACTTGTCGAGCGGAGAGAATCTTCGATTTTGTTGGAATTTGTTGATAGCTCCGTACGAATTTACAATGGAAAAACTTCGGTT
CGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCTTCAACACGAAAATGAAGACTTTCGAGAAGAAATATTGGACCGGGAAGAAAAGGGGAGAA
AGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTTTACCATATTGTCGGGCGACACTTGTCGAGCGGAGAGAATCTTCGATTTTGTTGGAATTTGTTGATAGCTCCGTACGAATTTACAATGGAAAAACTTCGGTT
CGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCTTCAACACGAAAATGAAGACTTTCGAGAAGAAATATTGGACCGGGAAGAAAAGGGGAGAA
AGTAA
Protein sequenceShow/hide protein sequence
MGLYHIVGRHLSSGENLRFCWNLLIAPYEFTMEKLRFVVRSLKEGLVINLESLLQHENEDFREEILDREEKGRK