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CmoCh14G008630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G008630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationCmo_Chr14:4562682..4562933
RNA-Seq ExpressionCmoCh14G008630
SyntenyCmoCh14G008630
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581212.1 Polcalcin Ole e 3, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3698.8Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFI+LEEFADFAKDNRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

XP_022935297.1 probable calcium-binding protein CML28 [Cucurbita moschata]8.9e-37100Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

XP_022982739.1 polcalcin Syr v 3-like [Cucurbita maxima]7.1e-3493.98Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MAESDISAAECERIFKRFDANGDGMISAAEL DALNGLGVNAEEAKRMMDAIDKDGDGFI+ EEFADF K+NRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

XP_023526616.1 probable calcium-binding protein CML28 [Cucurbita pepo subsp. pepo]3.4e-3697.59Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MAESD+SAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFI+LEEFADFAKDNRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

XP_038874793.1 probable calcium-binding protein CML28 [Benincasa hispida]8.1e-3084.34Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MAES +SAA+CERIFKRFDANGDG ISA EL DALNG GV+AE+AKRMMDAIDKDGDG I+ EEFA+FAKDNRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

TrEMBL top hitse value%identityAlignment
A0A1S4E1G1 polcalcin Bra n 2-like4.3e-2978.31Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MA+S +++A+CERIFKRFDANGDG ISA EL DALNG GV++E+AKRMMDAIDKDGDG+I+ +EF+DFAKDNRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

A0A6J1F559 probable calcium-binding protein CML284.3e-37100Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

A0A6J1G9I0 probable calcium-binding protein CML287.4e-2978.31Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MA++ + +AECERIFKRFDANGDG ISA EL DALNG+GV++E+AKRMMDAIDKDGDGFI+ +EF +FAKDNRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

A0A6J1J5E7 polcalcin Syr v 3-like3.4e-3493.98Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MAESDISAAECERIFKRFDANGDGMISAAEL DALNGLGVNAEEAKRMMDAIDKDGDGFI+ EEFADF K+NRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

A0A6J1KB11 probable calcium-binding protein CML287.4e-2978.31Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MA++ + +AECERIFKRFDANGDG ISA EL DALNG+GV++E+AKRMMDAIDKDGDGFI+ +EF +FAKDNRALMKDFAKAF
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 33.3e-1860.71Show/hide
Query:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        MA+     AE ERIFKRFDANGDG IS++EL + L  LG V  EE +RMM  ID DGDGFI+ EEF  FA+ NR L+KD AK F
Subjt:  MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

P69198 Polcalcin Bra n 21.5e-1864.47Show/hide
Query:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        AE +RIFK+FDANGDG ISA+EL DAL  LG V  ++ KRMM  ID DGDG+I+ +EF+DFA  NR LMKD AK F
Subjt:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

P69199 Polcalcin Bra r 21.5e-1864.47Show/hide
Query:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        AE +RIFK+FDANGDG ISA+EL DAL  LG V  ++ KRMM  ID DGDG+I+ +EF+DFA  NR LMKD AK F
Subjt:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

Q39419 Polcalcin Bet v 41.5e-1864.47Show/hide
Query:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        AE ERIFKRFDANGDG ISAAEL +AL  LG +  +E K MM  ID DGDGFI+ +EF DF + NR L+KD AK F
Subjt:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

Q9SRP7 Probable calcium-binding protein CML285.1e-1967.11Show/hide
Query:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        AE +RIFK+FDANGDG ISAAEL DAL  LG V  E+ KRMM  ID DGDG+I+ +EF DFA  NR LMKD AK F
Subjt:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

Arabidopsis top hitse value%identityAlignment
AT1G66400.1 calmodulin like 232.9e-0940.48Show/hide
Query:  SAAECERIFKRFDANGDGMISAAELVDALNGLGVNA--EEAKRMMDAIDKDGDGFITLEEFADF-----AKDNRALMKDFAKAF
        S  + +++F+RFD N DG IS  EL D +  L  NA  EE K MM   D DG+GFI L+EF           N + ++D  +AF
Subjt:  SAAECERIFKRFDANGDGMISAAELVDALNGLGVNA--EEAKRMMDAIDKDGDGFITLEEFADF-----AKDNRALMKDFAKAF

AT1G73630.1 EF hand calcium-binding protein family2.9e-0941.43Show/hide
Query:  ECERIFKRFDANGDGMISAAELVDALNGLGVN--AEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMK
        E +++F +FDANGDG IS +EL +    +G +   EE  R++D ID D DGFI  EEFA   + + + ++
Subjt:  ECERIFKRFDANGDGMISAAELVDALNGLGVN--AEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMK

AT3G03430.1 Calcium-binding EF-hand family protein3.6e-2067.11Show/hide
Query:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        AE +RIFK+FDANGDG ISAAEL DAL  LG V  E+ KRMM  ID DGDG+I+ +EF DFA  NR LMKD AK F
Subjt:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF

AT3G17470.1 Ca2+-activated RelA/spot homolog3.2e-0839.39Show/hide
Query:  ERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMK
        +R+F   D NGDGMIS  EL++ +  LG   E+A+ MM  +D + DG ++ +EF  F K    + K
Subjt:  ERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMK

AT5G17480.1 pollen calcium-binding protein 13.1e-1965.79Show/hide
Query:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF
        AE +RIFK+FDANGDG ISAAEL +AL  LG V A++ KRMM  ID DGDG I+ +EF DFA  NR LMKD AK F
Subjt:  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGAGTGACATAAGCGCAGCCGAGTGCGAGAGGATCTTCAAGCGATTCGACGCGAACGGCGACGGGATGATATCGGCGGCGGAGCTGGTCGATGCGTTGAACGG
ATTGGGAGTGAACGCGGAGGAGGCGAAGAGGATGATGGACGCGATTGACAAAGACGGCGATGGGTTCATAACGTTGGAAGAGTTCGCGGATTTCGCGAAGGATAATCGCG
CGTTGATGAAAGATTTTGCGAAGGCGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGAGTGACATAAGCGCAGCCGAGTGCGAGAGGATCTTCAAGCGATTCGACGCGAACGGCGACGGGATGATATCGGCGGCGGAGCTGGTCGATGCGTTGAACGG
ATTGGGAGTGAACGCGGAGGAGGCGAAGAGGATGATGGACGCGATTGACAAAGACGGCGATGGGTTCATAACGTTGGAAGAGTTCGCGGATTTCGCGAAGGATAATCGCG
CGTTGATGAAAGATTTTGCGAAGGCGTTTTAA
Protein sequenceShow/hide protein sequence
MAESDISAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFITLEEFADFAKDNRALMKDFAKAF