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CmoCh14G008670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G008670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCold-regulated protein
Genome locationCmo_Chr14:4581688..4581921
RNA-Seq ExpressionCmoCh14G008670
SyntenyCmoCh14G008670
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457074.1 PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo]1.6e-3590.91Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        MAVG+GVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNA+PI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
XP_022143411.1 uncharacterized protein LOC111013291 [Momordica charantia]1.3e-3492.21Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        MAVGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFA AAVVEWPVGALVYCFRH KGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
XP_022935253.1 uncharacterized protein LOC111442190 [Cucurbita moschata]1.3e-37100Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
XP_023528466.1 uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo]1.7e-3798.7Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        MAVGIGVP+CVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
XP_031737948.1 uncharacterized protein LOC116402578 [Cucumis sativus]2.7e-3592.21Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        M VGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
TrEMBL top hitse value%identityAlignment
A0A0A0LA45 Uncharacterized protein1.3e-3592.21Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        M VGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
A0A1S3C5C8 uncharacterized protein LOC1034968427.5e-3690.91Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        MAVG+GVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNA+PI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
A0A2N9J3H0 Uncharacterized protein1.7e-3287.01Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        M  GIG+PVCV+CGT  NPCRCKVVGPTLGFLAFAVAA+VEWPVGALVYCFRH KGRRIMAHP TVVYPSVSNA+PI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
A0A6J1CQ64 uncharacterized protein LOC1110132916.4e-3592.21Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        MAVGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFA AAVVEWPVGALVYCFRH KGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
A0A6J1FA13 uncharacterized protein LOC1114421906.2e-38100Show/hide
Query:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
Subjt:  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03341.1 unknown protein4.8e-2770.42Show/hide
Query:  VPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI
        +P+CV+CGT  NPCRCKVVGPTLG +AF  A +VEWPVGALVY F+H KGRRIM HP T VYP VS ++PI
Subjt:  VPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCGGAATCGGCGTTCCGGTCTGCGTCGAATGTGGAACCCACCGCAATCCGTGCAGGTGCAAGGTGGTGGGGCCGACCCTGGGGTTCTTGGCGTTCGCGGTGGC
GGCGGTTGTAGAGTGGCCAGTGGGAGCTCTGGTTTATTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCGGTCACCGTCGTTTACCCGTCGGTGTCTAATG
CGGTTCCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTCGGAATCGGCGTTCCGGTCTGCGTCGAATGTGGAACCCACCGCAATCCGTGCAGGTGCAAGGTGGTGGGGCCGACCCTGGGGTTCTTGGCGTTCGCGGTGGC
GGCGGTTGTAGAGTGGCCAGTGGGAGCTCTGGTTTATTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCGGTCACCGTCGTTTACCCGTCGGTGTCTAATG
CGGTTCCTATTTGA
Protein sequenceShow/hide protein sequence
MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIMAHPVTVVYPSVSNAVPI