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CmoCh14G008900 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G008900
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSenescence-associated protein, putative
Genome locationCmo_Chr14:4730343..4730856
RNA-Seq ExpressionCmoCh14G008900
SyntenyCmoCh14G008900
Gene Ontology termsNA
InterPro domainsIPR040358 - Uncharacterized protein At4g22758-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581236.1 hypothetical protein SDJN03_21238, partial [Cucurbita argyrosperma subsp. sororia]8.5e-6999.26Show/hide
Query:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
        MKG GLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
Subjt:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK

Query:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF
        KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF
Subjt:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF

XP_022143447.1 uncharacterized protein LOC111013321 [Momordica charantia]1.4e-4274.6Show/hide
Query:  RVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPA
        R E  KRLLI+++VVGS+GPLRF+A E+DLVCEVIHAALKSYARQARLPLLG  A+NFLLY +N E     LNPME IG KQARNFVLCKK  T  PL  
Subjt:  RVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPA

Query:  DQNMKKLMTLKESHGWKAWINKSLSF
        DQ MKKLM +KESHGWKAWINKSLSF
Subjt:  DQNMKKLMTLKESHGWKAWINKSLSF

XP_022934727.1 uncharacterized protein LOC111441823 [Cucurbita moschata]1.7e-69100Show/hide
Query:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
        MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
Subjt:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK

Query:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF
        KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF
Subjt:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF

XP_022983917.1 uncharacterized protein LOC111482395 [Cucurbita maxima]7.4e-6594.12Show/hide
Query:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
        MKG GL+NKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSS+SEDPYASLNP ETIGSKQARNFVLCK
Subjt:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK

Query:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF
        K AT SPLPADQ MKKLMTLKESHGWKAWIN SLSF
Subjt:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF

XP_023529063.1 uncharacterized protein LOC111791812 [Cucurbita pepo subsp. pepo]1.5e-6596.3Show/hide
Query:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
        MKG GLRNKERVEGGKRLL+SVNVVGSSGPLRFVAKEEDLV EVIHAALKSYARQARLP LGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
Subjt:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK

Query:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLS
        K ATASPLPADQNMKKLMTLKESHGWKAWINKSLS
Subjt:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLS

TrEMBL top hitse value%identityAlignment
A0A0A0LBQ6 Uncharacterized protein1.9e-3771.9Show/hide
Query:  KRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPADQNMK
        KR+LI++NV+GSSGPLRFV KEEDLVCEVIH ALKSYARQARLPLLGT  +NFLLYSSN      +LNP E IGSKQARNFVLCKK  T           
Subjt:  KRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPADQNMK

Query:  KLMTLKESHGWKAWINKSLSF
        K MT+KESHGWKAWINKSL+F
Subjt:  KLMTLKESHGWKAWINKSLSF

A0A1S2YDA3 uncharacterized protein LOC1015042812.5e-2651.18Show/hide
Query:  RNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATAS
        R  ++    KR L+++N++GSSGP+RFV  E++LV  VI  ALKSYAR+ RLP+LG +ASNFLLY  N+E  + +LNP+E IGS + RNFVLCKK    S
Subjt:  RNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATAS

Query:  PLPADQNMKKLMTLKESHGWKAWINKS
             +   +L + K + GWKAW+NKS
Subjt:  PLPADQNMKKLMTLKESHGWKAWINKS

A0A6J1CQV0 uncharacterized protein LOC1110133216.6e-4374.6Show/hide
Query:  RVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPA
        R E  KRLLI+++VVGS+GPLRF+A E+DLVCEVIHAALKSYARQARLPLLG  A+NFLLY +N E     LNPME IG KQARNFVLCKK  T  PL  
Subjt:  RVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPA

Query:  DQNMKKLMTLKESHGWKAWINKSLSF
        DQ MKKLM +KESHGWKAWINKSLSF
Subjt:  DQNMKKLMTLKESHGWKAWINKSLSF

A0A6J1F3L9 uncharacterized protein LOC1114418238.3e-70100Show/hide
Query:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
        MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
Subjt:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK

Query:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF
        KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF
Subjt:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF

A0A6J1J0M6 uncharacterized protein LOC1114823953.6e-6594.12Show/hide
Query:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
        MKG GL+NKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSS+SEDPYASLNP ETIGSKQARNFVLCK
Subjt:  MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK

Query:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF
        K AT SPLPADQ MKKLMTLKESHGWKAWIN SLSF
Subjt:  KVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23150.1 unknown protein2.4e-2143.18Show/hide
Query:  RNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATAS
        + K ++  G R+LISV  +GS+GP+RFVA E DLV  VI  ALK YAR+ RLP+LG+  ++F+ Y         +L+P E IGS   RNF+LCKK     
Subjt:  RNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATAS

Query:  PLPADQNMKKLMTLKESHG----WKAWINKSL
         +  D+            G    +KAWINKSL
Subjt:  PLPADQNMKKLMTLKESHG----WKAWINKSL

AT1G70780.1 unknown protein2.0e-2043.61Show/hide
Query:  FGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVA
        +  + K +   G R+LISV V+GS+GP+RFVA E+DLV  VI  ALK YAR+ RLPLLG+  ++FLLY      P A L+  + IGS  ARNF+LC+K  
Subjt:  FGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVA

Query:  TASPLPAD-QNMKKLMTLKESHGWKAWINKSLS
              ++ ++   +   ++    KAWINKS +
Subjt:  TASPLPAD-QNMKKLMTLKESHGWKAWINKSLS

AT2G27830.1 unknown protein4.1e-0534.44Show/hide
Query:  RLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLL-GTHASNF-LLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVAT
        +LL++V V GS G ++ +   E  V ++I AA++ Y ++AR P L  +  S F L YS  S +       + ++GS   RNF LC +  T
Subjt:  RLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLL-GTHASNF-LLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVAT

AT5G37730.1 unknown protein7.0e-2142.42Show/hide
Query:  LRNKERVEG-----GKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK
        +   E V+G      K+LL+SVNV+GS GP+RF+A E+D V   I+  LK+YARQ R+P+LG    NF+ YS N+   + +L+P E IGS    NF++CK
Subjt:  LRNKERVEG-----GKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCK

Query:  KVATASPLPADQNMKKLMTLKES-----HGWK
        K     P P    ++K+  ++ES     HGWK
Subjt:  KVATASPLPADQNMKKLMTLKES-----HGWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGGTTTGGGTTGAGGAACAAGGAAAGGGTGGAAGGTGGTAAGAGGCTGCTAATCAGTGTAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTTGTGGCGAAGGA
GGAAGATTTGGTGTGTGAAGTTATTCATGCTGCGCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTACTTGGCACTCATGCTTCCAACTTTCTTCTCTATTCTTCTA
ATTCTGAGGACCCATATGCCTCTCTTAATCCAATGGAAACCATAGGATCAAAGCAAGCAAGAAACTTTGTGCTATGCAAGAAGGTAGCCACAGCATCCCCATTGCCAGCT
GATCAAAACATGAAAAAGCTAATGACACTAAAGGAAAGCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGGTTTGGGTTGAGGAACAAGGAAAGGGTGGAAGGTGGTAAGAGGCTGCTAATCAGTGTAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTTGTGGCGAAGGA
GGAAGATTTGGTGTGTGAAGTTATTCATGCTGCGCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTACTTGGCACTCATGCTTCCAACTTTCTTCTCTATTCTTCTA
ATTCTGAGGACCCATATGCCTCTCTTAATCCAATGGAAACCATAGGATCAAAGCAAGCAAGAAACTTTGTGCTATGCAAGAAGGTAGCCACAGCATCCCCATTGCCAGCT
GATCAAAACATGAAAAAGCTAATGACACTAAAGGAAAGCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTTAAGATACCC
Protein sequenceShow/hide protein sequence
MKGFGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPA
DQNMKKLMTLKESHGWKAWINKSLSF