CuGenDBv2

Gene ID	CmoCh14G009500
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein .
Genome location	Cmo_Chr14:5059377..5062922
RNA-Seq Expression	CmoCh14G009500
Synteny	CmoCh14G009500
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581290.1 hypothetical protein SDJN03_21292, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-139

84.81

Show/hide

Query:  MGVESNSG-PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMAS
        MGVESNSG PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRY                                             L++IMAS
Subjt:  MGVESNSG-PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMAS

Query:  SLNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTS
        SLNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTS
Subjt:  SLNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTS

Query:  LQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQK
        LQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQK
Subjt:  LQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQK

Query:  SCKDLNREMKDSESGG
        SCKDLNREMKDSESGG
Subjt:  SCKDLNREMKDSESGG

XP_022934215.1 uncharacterized protein LOC111441454 isoform X1 [Cucurbita moschata]

1.1e-140

85.08

Show/hide

Query:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS
        MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRY                                             L++IMASS
Subjt:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS

Query:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL
        LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL
Subjt:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL

Query:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS
        QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS
Subjt:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS

Query:  CKDLNREMKDSESGG
        CKDLNREMKDSESGG
Subjt:  CKDLNREMKDSESGG

XP_022984066.1 uncharacterized protein LOC111482488 isoform X1 [Cucurbita maxima]

1.3e-133

81.9

Show/hide

Query:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS
        MGVESNS PPPPP   SSSSTPSPSGKRARDPDDEVYLDNFHSHKRY                                             L++IMASS
Subjt:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS

Query:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL
        LNGLTVGD LSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSD+SVPTSPVSPYRYQRPFSGMTPST TNTSLGCNT PVTSL
Subjt:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL

Query:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS
        QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECS+MGVSEPEYNEQKS
Subjt:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS

Query:  CKDLNREMKDSESGG
        CKDLNREMKD ESGG
Subjt:  CKDLNREMKDSESGG

XP_023526160.1 uncharacterized protein LOC111789720 [Cucurbita pepo subsp. pepo]

2.0e-137

83.39

Show/hide

Query:  MGVESNSG----PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQI
        MGVESNS     PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRY                                             L++I
Subjt:  MGVESNSG----PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQI

Query:  MASSLNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGP
        MASSLNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGP
Subjt:  MASSLNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGP

Query:  VTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYN
        VTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYN
Subjt:  VTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYN

Query:  EQKSCKDLNREMKDSESGG
        EQKSCKDLN EMKDSESGG
Subjt:  EQKSCKDLNREMKDSESGG

XP_038904570.1 uncharacterized protein LOC120090942 [Benincasa hispida]

1.3e-125

78.41

Show/hide

Query:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS
        MGVESNS PPP     SSSSTPSPSGKRARDPDDEVYLDNFHSHKRY                                             L++IMASS
Subjt:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS

Query:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL
        LNGLTVGDPLSENLMDSPARSESMLY R+EMS QYSPMSEDSDDCRFCETSTNLFP+QSDSSVPTSPVSPYRYQRPFSG+TPSTGTNTSLGC+T PVTSL
Subjt:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL

Query:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS
        QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEER CS IKSLVDER +QL ECSSMGVSEPEYNE+KS
Subjt:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS

Query:  CKDLNREMKDSESGG
        CKDLNR+MKDSESGG
Subjt:  CKDLNREMKDSESGG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWN0 Uncharacterized protein

6.1e-124

78.3

Show/hide

Query:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS
        MGVESNS PPPP   +SSSSTPSPSGKRARDPDDEVYLDNFHSHKRY                                             L++IMASS
Subjt:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS

Query:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCN-TGPVTS
        LNGLTVGDPLSENLMDSPARSESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSG+ PSTGTNTSLGC+ T PVTS
Subjt:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCN-TGPVTS

Query:  LQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM--GVSEPEYNE
        LQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSSM  GVSE EYNE
Subjt:  LQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM--GVSEPEYNE

Query:  QKSCKDLNREMKDSESGG
        QKSCKDLNR+MKDS SGG
Subjt:  QKSCKDLNREMKDSESGG

A0A1S3BXT2 uncharacterized protein LOC103494744 isoform X1

4.2e-125

78.23

Show/hide

Query:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS
        MGVESNS PPPPP  +SSSSTPSPSGKRARDP+DEVYLDNFHSHKRY                                             L++IMASS
Subjt:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS

Query:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL
        LNGLTVG+PLSENLMDSPARSESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM PS GTNTSLGC+T PVTSL
Subjt:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL

Query:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM--GVSEPEYNEQ
        QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSSM  GVSE EYNEQ
Subjt:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM--GVSEPEYNEQ

Query:  KSCKDLNREMKDSESGG
        KSCKDLNR+MKDS+SGG
Subjt:  KSCKDLNREMKDSESGG

A0A5A7TRC2 Uncharacterized protein

4.2e-125

78.23

Show/hide

Query:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS
        MGVESNS PPPPP  +SSSSTPSPSGKRARDP+DEVYLDNFHSHKRY                                             L++IMASS
Subjt:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS

Query:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL
        LNGLTVG+PLSENLMDSPARSESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM PS GTNTSLGC+T PVTSL
Subjt:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL

Query:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM--GVSEPEYNEQ
        QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSSM  GVSE EYNEQ
Subjt:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM--GVSEPEYNEQ

Query:  KSCKDLNREMKDSESGG
        KSCKDLNR+MKDS+SGG
Subjt:  KSCKDLNREMKDSESGG

A0A6J1F722 uncharacterized protein LOC111441454 isoform X1

5.5e-141

85.08

Show/hide

Query:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS
        MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRY                                             L++IMASS
Subjt:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS

Query:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL
        LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL
Subjt:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL

Query:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS
        QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS
Subjt:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS

Query:  CKDLNREMKDSESGG
        CKDLNREMKDSESGG
Subjt:  CKDLNREMKDSESGG

A0A6J1J464 uncharacterized protein LOC111482488 isoform X1

6.5e-134

81.9

Show/hide

Query:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS
        MGVESNS PPPPP   SSSSTPSPSGKRARDPDDEVYLDNFHSHKRY                                             L++IMASS
Subjt:  MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASS

Query:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL
        LNGLTVGD LSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSD+SVPTSPVSPYRYQRPFSGMTPST TNTSLGCNT PVTSL
Subjt:  LNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSL

Query:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS
        QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECS+MGVSEPEYNEQKS
Subjt:  QPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS

Query:  CKDLNREMKDSESGG
        CKDLNREMKD ESGG
Subjt:  CKDLNREMKDSESGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G25920.1 BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2)

1.6e-52

46.45

Show/hide

Query:  PPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPL
        PP P S S    SP GKR RDP+DEVYLDN  S KRY                                             L++IMA SLNGLTVGD L
Subjt:  PPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPL

Query:  SENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCE--TSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNT----------SLGCNTGPVT
          N+++SPARSES LY RD++S QYSPMSEDSD+ RFCE  T+T    S    S PTSPVSPYRYQRP +       + T          S+  N    T
Subjt:  SENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCE--TSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNT----------SLGCNTGPVT

Query:  SLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQ
        + Q  QRGSD+EGRFPSSPSDICHS DLRR ALLRSVQMR QP G SS   P         NI+ EER CS  KS+ ++R Y  GE   +  +E   ++ 
Subjt:  SLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQ

Query:  KSCKDLNREM
        KSCK L+  +
Subjt:  KSCKDLNREM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGGGCGTTGAATCGAACTCCGGGCCGCCGCCGCCGCCGCCATCGTCGTCGTCGTCTTCTACGCCATCTCCAAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTA
TCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGGCATCTGAAACTTCTTTGCCTTTACACATTTTGTTTTGATCCAGAAAAGCTATCGTTTTGCGTCATTCCTGTGT
CTGCCTTTCTGGGTGCAAAATTCCCTCCTAACGTATATCCCTTCGTTGTTAATGATCTTGCACAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTT
TCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTT
TTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAA
CAGGTACCAATACTTCACTTGGATGTAATACTGGTCCTGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCTTCGTCTCCTAGTGATATA
TGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCAGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACC
TGGACCTAACATAGAAGCCGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTG
AATATAATGAACAGAAATCTTGCAAGGACTTGAACAGGGAAATGAAAGACAGTGAGTCTGGAGGGTAGTTGTAAATGCTCAGCAGAGGAAAAATCTCTTCTAACGTAACA
CATGGGACACATTGCTGCTGTGGAACTGTGAAGTGTTTGTTTTTTGGTTCAACCTCCATGGAAATTCTCTTTTTGCATATGCTGCAAAATTGCTTTTGCTTGATTGAGTA
TGGTTTGGTCTTCTTCTAGGTCCTTTCCCGAGTGTGTGGTGCCTTGTGTGCTGTGTTCATTGTCGAGCGAGCTATTCTTATGAAGCCCGAGTCGAGTCGAGAAGAGATGT
TCATTGTCAAGCTTGTGTGATCAACTCTGTCTATTTGATTCCTACTCGAGCTCGAGTCGAGAGAAGATGTTTCTCGGAGCTAATTTTCTAGATAAAATGCTGCTGCGGCT
TTAGAGGTCACAAGATTGAAGCTGCCAGTGTCCCATTTGTTCCGTATTTATAACGCTGCTATTATTGAATTTTTGTTCTAATTGCCTTCTGAACTTACAGGCAAAATTGA
TCGGAAAATCAAAAGATGAATAGAGATATGATATTATATGTAGAGTTTCATCACCTGGGTCATAAACACGGCTGTATTGATGGGGACTTATTGGGCCGTTTCTTCCAAAG
AGAAAGCCCAGCCGTATTAAAAGCCCATATGGATGGGCTTAAATAATTAAGAAAAAGGCAATCCACGGAGGC

Protein sequence

Show/hide protein sequence

MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPL
SENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDI
CHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKSCKDLNREMKDSESGG

CmoCh14G009500 (gene) of Cucurbita moschata (Rifu) v1 genome