CuGenDBv2

Gene ID	CmoCh14G009850
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1
Genome location	Cmo_Chr14:5274792..5277350
RNA-Seq Expression	CmoCh14G009850
Synteny	CmoCh14G009850
Gene Ontology terms	NA
InterPro domains	IPR044985 - Large ribosomal RNA subunit accumulation protein YceD homologue 2, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022934819.1 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1 [Cucurbita moschata]

9.9e-149

100

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
        TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS

XP_022934820.1 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2 [Cucurbita moschata]

5.3e-118

83.09

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRE                                               INANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
        TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS

XP_022983267.1 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1 [Cucurbita maxima]

9.3e-139

88.45

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAA NVNSISSSFNK AA KFATQ FKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQG+WSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSF RKCCTCSSPYCRETMMAAIRLKSIV FTISLSSLSHLFMRVQFSSIPTEVLTP IILIQQINANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQY-------------------------IGAQNAASIDKRWSRLLELRK
        TLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQ                          IGAQNAASIDKRWSRLLELRK
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQY-------------------------IGAQNAASIDKRWSRLLELRK

Query:  SHS
        SHS
Subjt:  SHS

XP_022983268.1 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2 [Cucurbita maxima]

5.6e-144

96.76

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAA NVNSISSSFNK AA KFATQ FKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQG+WSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSF RKCCTCSSPYCRETMMAAIRLKSIV FTISLSSLSHLFMRVQFSSIPTEVLTP IILIQQINANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
        TLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS

XP_023527889.1 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]

9.4e-115

81.29

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAA NVNSISSSFNKAAA KFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQG+WS DYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSF RKCCTCSSPYCRE                                               INANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
        TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1F3N3 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1

4.8e-149

100

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
        TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS

A0A6J1F8T8 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2

2.6e-118

83.09

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRE                                               INANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
        TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS

A0A6J1IYU4 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1

4.5e-139

88.45

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAA NVNSISSSFNK AA KFATQ FKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQG+WSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSF RKCCTCSSPYCRETMMAAIRLKSIV FTISLSSLSHLFMRVQFSSIPTEVLTP IILIQQINANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQY-------------------------IGAQNAASIDKRWSRLLELRK
        TLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQ                          IGAQNAASIDKRWSRLLELRK
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQY-------------------------IGAQNAASIDKRWSRLLELRK

Query:  SHS
        SHS
Subjt:  SHS

A0A6J1J5E3 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X4

5.9e-115

80.58

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAA NVNSISSSFNK AA KFATQ FKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQG+WSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSF RKCCTCSSPYCRE                                               INANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
        TLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS

A0A6J1J7A5 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2

2.7e-144

96.76

Show/hide

Query:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
        MAEAGHLVAA NVNSISSSFNK AA KFATQ FKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQG+WSCDYLLSLQDFNLEDLVEDEHKNAHVFINL
Subjt:  MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINL

Query:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET
        CIEKHASFGFTVDGKINTSF RKCCTCSSPYCRETMMAAIRLKSIV FTISLSSLSHLFMRVQFSSIPTEVLTP IILIQQINANFNVLVLSSNRAKRET
Subjt:  CIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRET

Query:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
        TLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS
Subjt:  TLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS

SwissProt top hits

e value

%identity

Alignment

Q9C5M1 Large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic

7.1e-49

45.81

Show/hide

Query:  SSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINLCIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTF
        SSK  +RLIT+S +   W G W   Y +SL+D  L+DLVED   N+ V ++L +++HAS G +VDG+I TS  RKC  CSS Y R               
Subjt:  SSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINLCIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTF

Query:  TISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKS
                                         I+ +F V +L S+R  R +TLP+IGGDDPSVIYV+PG EA+LDSLV+DTIRLTT  KD CS+ CEKS
Subjt:  TISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKS

Query:  QPSVQYIGAQNAASIDKRWSRLLELRK
        +P++ Y+G  N AS+DKRWSRLLEL+K
Subjt:  QPSVQYIGAQNAASIDKRWSRLLELRK

Arabidopsis top hits

e value

%identity

Alignment

AT3G19800.1 Protein of unknown function (DUF177)

5.0e-50

45.81

Show/hide

Query:  SSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINLCIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTF
        SSK  +RLIT+S +   W G W   Y +SL+D  L+DLVED   N+ V ++L +++HAS G +VDG+I TS  RKC  CSS Y R               
Subjt:  SSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINLCIEKHASFGFTVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTF

Query:  TISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKS
                                         I+ +F V +L S+R  R +TLP+IGGDDPSVIYV+PG EA+LDSLV+DTIRLTT  KD CS+ CEKS
Subjt:  TISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKS

Query:  QPSVQYIGAQNAASIDKRWSRLLELRK
        +P++ Y+G  N AS+DKRWSRLLEL+K
Subjt:  QPSVQYIGAQNAASIDKRWSRLLELRK

AT3G19800.2 Protein of unknown function (DUF177)

1.5e-49

44.35

Show/hide

Query:  FATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINLCIEKHASFGFTVDGKINTSFIRKCCTC
        F++ + K +ASS    I+   SSK  +RLIT+S +   W G W   Y +SL+D  L+DLVED   N+ V ++L +++HAS G +VDG+I TS  RKC  C
Subjt:  FATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINLCIEKHASFGFTVDGKINTSFIRKCCTC

Query:  SSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGLEADLDSLV
        SS Y R                                                I+ +F V +L S+R  R +TLP+IGGDDPSVIYV+PG EA+LDSLV
Subjt:  SSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGLEADLDSLV

Query:  RDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRK
        +DTIRLTT  KD CS+ CEKS+P++ Y+G  N AS+DKRWSRLLEL+K
Subjt:  RDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAGAAGCTGGGCACCTTGTAGCAGCTGCAAATGTCAACTCCATTTCAAGTTCATTCAATAAGGCTGCTGCATCCAAATTTGCAACTCAAGCATTCAAAATCAAAGC
TTCTTCAAAGAGAAATGATATCTCCTTGAGAAGAAGCAGCAAACCTCCACGGCGTCTGATCACAATATCAACAGCAGGAAGCATGTGGCAGGGGAGATGGAGCTGTGATT
ACCTGCTTTCCCTGCAAGACTTCAACTTAGAAGACTTGGTAGAAGATGAACACAAAAACGCACACGTCTTCATCAATCTCTGTATTGAGAAGCACGCAAGTTTCGGGTTT
ACCGTGGATGGAAAGATCAACACATCCTTCATTCGAAAGTGCTGTACCTGTTCTTCACCATACTGCAGAGAGACAATGATGGCAGCTATTAGATTAAAAAGTATAGTAAC
CTTCACAATTTCCTTGTCATCTCTATCTCATCTATTCATGAGGGTTCAATTCAGCAGCATCCCAACCGAGGTTCTAACACCTACAATCATTTTAATCCAACAGATCAATG
CAAATTTTAATGTACTTGTTCTGTCATCAAACAGAGCCAAACGGGAGACTACTCTTCCAGACATTGGAGGCGATGATCCATCGGTGATCTACGTTAAACCCGGACTTGAG
GCTGATCTAGATTCATTGGTACGTGACACAATTAGGCTTACCACCTCAACAAAGGACACTTGCTCAGAGTTGTGTGAGAAATCTCAACCCTCAGTGCAATATATTGGAGC
ACAGAATGCTGCGTCTATAGACAAGAGGTGGTCTAGGCTTCTGGAGCTTAGAAAATCTCATTCATAG

mRNA sequence

Show/hide mRNA sequence

AATAGCTAAACTCAGATCAAAATGAAGACATTTCCAAGAAGGAATTGGGGCCTTATATTTTGAGCAGATAAGGTTCCAATTCCAACTTCCTGCTTTCTCCACGCATTATC
GTCTCTTACAGAGAAATGGCAGAAGCTGGGCACCTTGTAGCAGCTGCAAATGTCAACTCCATTTCAAGTTCATTCAATAAGGCTGCTGCATCCAAATTTGCAACTCAAGC
ATTCAAAATCAAAGCTTCTTCAAAGAGAAATGATATCTCCTTGAGAAGAAGCAGCAAACCTCCACGGCGTCTGATCACAATATCAACAGCAGGAAGCATGTGGCAGGGGA
GATGGAGCTGTGATTACCTGCTTTCCCTGCAAGACTTCAACTTAGAAGACTTGGTAGAAGATGAACACAAAAACGCACACGTCTTCATCAATCTCTGTATTGAGAAGCAC
GCAAGTTTCGGGTTTACCGTGGATGGAAAGATCAACACATCCTTCATTCGAAAGTGCTGTACCTGTTCTTCACCATACTGCAGAGAGACAATGATGGCAGCTATTAGATT
AAAAAGTATAGTAACCTTCACAATTTCCTTGTCATCTCTATCTCATCTATTCATGAGGGTTCAATTCAGCAGCATCCCAACCGAGGTTCTAACACCTACAATCATTTTAA
TCCAACAGATCAATGCAAATTTTAATGTACTTGTTCTGTCATCAAACAGAGCCAAACGGGAGACTACTCTTCCAGACATTGGAGGCGATGATCCATCGGTGATCTACGTT
AAACCCGGACTTGAGGCTGATCTAGATTCATTGGTACGTGACACAATTAGGCTTACCACCTCAACAAAGGACACTTGCTCAGAGTTGTGTGAGAAATCTCAACCCTCAGT
GCAATATATTGGAGCACAGAATGCTGCGTCTATAGACAAGAGGTGGTCTAGGCTTCTGGAGCTTAGAAAATCTCATTCATAGATAACAAACAATATATAATACATATTTT
GATGGTTGTTCACAAGGCCTTTATAACATGATTGCCCATTGGTAAAATTAAATTATTTATCATGGTTTCTAAGCCAATATCATCATAAAAGTGGTTGGCCTCTTATTGAA
TAGAAGTGGA

Protein sequence

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MAEAGHLVAAANVNSISSSFNKAAASKFATQAFKIKASSKRNDISLRRSSKPPRRLITISTAGSMWQGRWSCDYLLSLQDFNLEDLVEDEHKNAHVFINLCIEKHASFGF
TVDGKINTSFIRKCCTCSSPYCRETMMAAIRLKSIVTFTISLSSLSHLFMRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGLE
ADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS

CmoCh14G009850 (gene) of Cucurbita moschata (Rifu) v1 genome