; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G009990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G009990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L44
Genome locationCmo_Chr14:5386527..5387204
RNA-Seq ExpressionCmoCh14G009990
SyntenyCmoCh14G009990
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052773.1 60S ribosomal protein L44 [Cucumis melo var. makuwa]7.2e-4151.22Show/hide
Query:  MAESS-----DKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPP-------PPLIKGEIIVDSG
        MA+SS      K    FLF CFRSS  +  +K   IA  NRRT SL FRFKKSSATVP+D A P HDELS SP+F  PPP        P + GEI+VDSG
Subjt:  MAESS-----DKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPP-------PPLIKGEIIVDSG

Query:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPSLHS----------EKGLKKSIS-HLPTAAAALTTSLPSSDRWKP----PTNSPNKKFDLVIV
         +++KPS+TRKK ESTQSN     T    +  +K + SLHS          +K  K+S+S HLP A A  TTS   SD  KP     TN P K  D VI+
Subjt:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPSLHS----------EKGLKKSIS-HLPTAAAALTTSLPSSDRWKP----PTNSPNKKFDLVIV

Query:  IVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAFG
        +V VAI+VLWGRLCAILCT ALFYL R +RS+ E    + GGG  G
Subjt:  IVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAFG

KAG6581554.1 hypothetical protein SDJN03_21556, partial [Cucurbita argyrosperma subsp. sororia]9.9e-11598.22Show/hide
Query:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK
        MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNT PPPPLIKGEIIVDSGCKTIKPSKTRKK
Subjt:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK

Query:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRR
        SESTQSNPKSESTQS+STAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRR
Subjt:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRR

Query:  CLRSKAELDVVIHGGGAFGRVSSEV
        CLRSKAELDVV+ GGGAFGRVSSEV
Subjt:  CLRSKAELDVVIHGGGAFGRVSSEV

KGN58547.1 hypothetical protein Csa_002056 [Cucumis sativus]3.4e-3851Show/hide
Query:  MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPP-------PPLIKGEIIVDSG
        MA+SS+     K  LHFLF CFRSS  +  +KA  IA   RRT S  FRFKKSSATVP+D A P HDELS  PEF   PP        P + GEI+VDS 
Subjt:  MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPP-------PPLIKGEIIVDSG

Query:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPSLHS----------EKGLKKSIS-HLPTAAAALTTSLPSSDRWKP----PTNSPNKKFDLVIV
          ++KPS+TRKK  STQSN     T    +  +KT+  LHS          +K  KK +S HLP A A  TTS   SD  KP    PT  P K FD VI+
Subjt:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPSLHS----------EKGLKKSIS-HLPTAAAALTTSLPSSDRWKP----PTNSPNKKFDLVIV

Query:  IVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAFGRVS
        +V VAIV+LWGRLCAILCT ALFYL R +RS+ E D    GG   GR+S
Subjt:  IVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAFGRVS

XP_022934627.1 uncharacterized protein LOC111441760 [Cucurbita moschata]2.1e-117100Show/hide
Query:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK
        MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK
Subjt:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK

Query:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRR
        SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRR
Subjt:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRR

Query:  CLRSKAELDVVIHGGGAFGRVSSEV
        CLRSKAELDVVIHGGGAFGRVSSEV
Subjt:  CLRSKAELDVVIHGGGAFGRVSSEV

XP_022982640.1 uncharacterized protein LOC111481455 [Cucurbita maxima]1.3e-9385.46Show/hide
Query:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK
        MAESSDKPRLHFLFRCFRSSPNVQRQKA  IASPNRRTPSLRFRFKK SATVPLDAAVPCHDELS SPEFNTPPPP  IKGEIIVDSGCKTIK SKTRKK
Subjt:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK

Query:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAAL--TTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYL
        SESTQSNP    T       KKTSPSLHSEKGLKKSISHLP A A    TTSL SSD WK PTNSP  KFDLV VIVAVAIVVLWGRLCAILCTAALFYL
Subjt:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAAL--TTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYL

Query:  RRCLRSKAELDVVIHGGGAFGRVSSEV
        RRCLRSKAELDVV+ GGGAFG+VSSEV
Subjt:  RRCLRSKAELDVVIHGGGAFGRVSSEV

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ2 Uncharacterized protein1.6e-3851Show/hide
Query:  MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPP-------PPLIKGEIIVDSG
        MA+SS+     K  LHFLF CFRSS  +  +KA  IA   RRT S  FRFKKSSATVP+D A P HDELS  PEF   PP        P + GEI+VDS 
Subjt:  MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPP-------PPLIKGEIIVDSG

Query:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPSLHS----------EKGLKKSIS-HLPTAAAALTTSLPSSDRWKP----PTNSPNKKFDLVIV
          ++KPS+TRKK  STQSN     T    +  +KT+  LHS          +K  KK +S HLP A A  TTS   SD  KP    PT  P K FD VI+
Subjt:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPSLHS----------EKGLKKSIS-HLPTAAAALTTSLPSSDRWKP----PTNSPNKKFDLVIV

Query:  IVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAFGRVS
        +V VAIV+LWGRLCAILCT ALFYL R +RS+ E D    GG   GR+S
Subjt:  IVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAFGRVS

A0A5A7UA28 60S ribosomal protein L443.5e-4151.22Show/hide
Query:  MAESS-----DKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPP-------PPLIKGEIIVDSG
        MA+SS      K    FLF CFRSS  +  +K   IA  NRRT SL FRFKKSSATVP+D A P HDELS SP+F  PPP        P + GEI+VDSG
Subjt:  MAESS-----DKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPP-------PPLIKGEIIVDSG

Query:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPSLHS----------EKGLKKSIS-HLPTAAAALTTSLPSSDRWKP----PTNSPNKKFDLVIV
         +++KPS+TRKK ESTQSN     T    +  +K + SLHS          +K  K+S+S HLP A A  TTS   SD  KP     TN P K  D VI+
Subjt:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPSLHS----------EKGLKKSIS-HLPTAAAALTTSLPSSDRWKP----PTNSPNKKFDLVIV

Query:  IVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAFG
        +V VAI+VLWGRLCAILCT ALFYL R +RS+ E    + GGG  G
Subjt:  IVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAFG

A0A6J1F3C2 uncharacterized protein LOC1114417601.0e-117100Show/hide
Query:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK
        MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK
Subjt:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK

Query:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRR
        SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRR
Subjt:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRR

Query:  CLRSKAELDVVIHGGGAFGRVSSEV
        CLRSKAELDVVIHGGGAFGRVSSEV
Subjt:  CLRSKAELDVVIHGGGAFGRVSSEV

A0A6J1GBH7 uncharacterized protein LOC1114526503.6e-3848.59Show/hide
Query:  MAESSDKPR-----LHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAA-----VPCHDELSLSPEFNTPPPPPLIKGE--IIVDSG
        MAE+S+K       LHFL RCF SSP VQ +K       + R PS RFRFKKSSATVP+D A     VPC D+ S SPEF  PPP PLIK     +    
Subjt:  MAESSDKPR-----LHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAA-----VPCHDELSLSPEFNTPPPPPLIKGE--IIVDSG

Query:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPS--LHSEKGLKKSISHLPTAAAALTTSLPSSDRW----KPPTNSPNKKFDLVIVIVAVAIVVL
         + IKPS+  KK+EST+S+  + + ++ +     + PS  L+ +K  KK++SHL   +A  T +  SS+R     KPP NSP K  DL+IVIVAVAIVVL
Subjt:  CKTIKPSKTRKKSESTQSNPKSESTQSNSTAEKKTSPS--LHSEKGLKKSISHLPTAAAALTTSLPSSDRW----KPPTNSPNKKFDLVIVIVAVAIVVL

Query:  WGRLCAILCTAALFYLRRCLRSKAELD------VVIHGGGAFGRVSSEV
        WG+LCAILCT ALFY  R LRS+ EL+      V+   G  F +VS EV
Subjt:  WGRLCAILCTAALFYLRRCLRSKAELD------VVIHGGGAFGRVSSEV

A0A6J1IZW6 uncharacterized protein LOC1114814556.1e-9485.46Show/hide
Query:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK
        MAESSDKPRLHFLFRCFRSSPNVQRQKA  IASPNRRTPSLRFRFKK SATVPLDAAVPCHDELS SPEFNTPPPP  IKGEIIVDSGCKTIK SKTRKK
Subjt:  MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKK

Query:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAAL--TTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYL
        SESTQSNP    T       KKTSPSLHSEKGLKKSISHLP A A    TTSL SSD WK PTNSP  KFDLV VIVAVAIVVLWGRLCAILCTAALFYL
Subjt:  SESTQSNPKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAAL--TTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYL

Query:  RRCLRSKAELDVVIHGGGAFGRVSSEV
        RRCLRSKAELDVV+ GGGAFG+VSSEV
Subjt:  RRCLRSKAELDVVIHGGGAFGRVSSEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCTTCCGACAAGCCCCGACTCCATTTTCTCTTCCGTTGCTTCAGATCTTCCCCCAACGTTCAACGCCAAAAGGCTCACCCGATCGCCTCCCCGAACCGCAG
GACTCCGTCGCTTCGTTTTCGATTCAAGAAGTCCTCTGCAACTGTGCCGCTCGACGCCGCCGTACCATGTCACGATGAACTCTCTTTGTCGCCGGAGTTCAATACACCGC
CTCCGCCGCCGCTGATTAAAGGCGAAATCATCGTGGATTCGGGCTGTAAGACAATAAAGCCGAGTAAAACTCGGAAGAAATCCGAGTCAACTCAGTCGAATCCGAAATCC
GAGTCAACTCAGTCTAATTCCACGGCGGAGAAAAAAACTTCCCCGTCGTTACACTCCGAAAAAGGTTTGAAGAAATCAATCTCTCATCTCCCTACCGCCGCCGCCGCCCT
AACTACATCGCTGCCGTCCTCCGACCGCTGGAAACCGCCGACAAATTCCCCAAACAAGAAGTTCGATCTCGTAATTGTAATTGTTGCGGTAGCGATTGTAGTACTGTGGG
GACGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACCTCAGACGTTGCCTGAGATCGAAAGCCGAACTGGACGTCGTCATCCACGGAGGAGGTGCTTTTGGTAGG
GTTTCATCAGAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAATCTTCCGACAAGCCCCGACTCCATTTTCTCTTCCGTTGCTTCAGATCTTCCCCCAACGTTCAACGCCAAAAGGCTCACCCGATCGCCTCCCCGAACCGCAG
GACTCCGTCGCTTCGTTTTCGATTCAAGAAGTCCTCTGCAACTGTGCCGCTCGACGCCGCCGTACCATGTCACGATGAACTCTCTTTGTCGCCGGAGTTCAATACACCGC
CTCCGCCGCCGCTGATTAAAGGCGAAATCATCGTGGATTCGGGCTGTAAGACAATAAAGCCGAGTAAAACTCGGAAGAAATCCGAGTCAACTCAGTCGAATCCGAAATCC
GAGTCAACTCAGTCTAATTCCACGGCGGAGAAAAAAACTTCCCCGTCGTTACACTCCGAAAAAGGTTTGAAGAAATCAATCTCTCATCTCCCTACCGCCGCCGCCGCCCT
AACTACATCGCTGCCGTCCTCCGACCGCTGGAAACCGCCGACAAATTCCCCAAACAAGAAGTTCGATCTCGTAATTGTAATTGTTGCGGTAGCGATTGTAGTACTGTGGG
GACGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACCTCAGACGTTGCCTGAGATCGAAAGCCGAACTGGACGTCGTCATCCACGGAGGAGGTGCTTTTGGTAGG
GTTTCATCAGAGGTTTAG
Protein sequenceShow/hide protein sequence
MAESSDKPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLDAAVPCHDELSLSPEFNTPPPPPLIKGEIIVDSGCKTIKPSKTRKKSESTQSNPKS
ESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHGGGAFGR
VSSEV