CuGenDBv2

Gene ID	CmoCh14G010070
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein TAPETUM DETERMINANT 1-like
Genome location	Cmo_Chr14:5439520..5439961
RNA-Seq Expression	CmoCh14G010070
Synteny	CmoCh14G010070
Gene Ontology terms	GO:0001709 - cell fate determination (biological process)
InterPro domains	IPR040361 - Tapetum determinant 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7018068.1 hypothetical protein SDJN02_19934, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.1e-59

93.44

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        MAIFLKFLTPLLFLSLL TGNCQCESNNIQINQ RTGFQI+GMTQWKVTISNNCICSQSNVKLDCRGFQ  ESIDPSILAI DTECLVN+GRPIFNFNPI
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
        N+TYARDPKFKFDLISSQVACS
Subjt:  NFTYARDPKFKFDLISSQVACS

KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.4e-45

73.77

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        MA FLK    LLF+SLL  GNCQC SN+I I+Q  TGFQIHGMT+W VTISNNC+CSQS VKLDC+GFQT +SIDPSILA++DTECLVNNG PIF  NP+
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
         FTYA+DPKF F LISSQ+ACS
Subjt:  NFTYARDPKFKFDLISSQVACS

XP_023518832.1 uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo]

1.6e-42

70.49

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        MA F      LLF+SLL  GN QC  N+I I+Q  TGFQIHGMT+W VTISNNC+CSQS VKLDCRGFQT +S+DPSILA++DTECLVNNG PIF  NP+
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
         FTYA+DPKF F LISSQ+ACS
Subjt:  NFTYARDPKFKFDLISSQVACS

XP_031742370.1 uncharacterized protein At1g05835-like [Cucumis sativus]

3.2e-43

71.31

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        M IF K L  LL LSL+STGNCQC  NNI+I+Q+ TGFQIHGMT+WKVTI+NNCICSQS++KLDC+GF T  SIDPSILAISD+ECLVNNG+PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
         F YA+ PKF F  +SSQ++CS
Subjt:  NFTYARDPKFKFDLISSQVACS

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]

9.0e-46

74.59

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        MAIF+K +T LL LSL+STGNCQC  NNI I+Q  TGFQIHGMT+WKVTISNNC CSQS VK+DC+GFQT ESIDPSILA+ DTECLVNNG PIFN NPI
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
         F+YA+DP+F F  ISSQ++CS
Subjt:  NFTYARDPKFKFDLISSQVACS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLZ6 Uncharacterized protein

1.6e-43

71.31

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        M IF K L  LL LSL+STGNCQC  NNI+I+Q+ TGFQIHGMT+WKVTI+NNCICSQS++KLDC+GF T  SIDPSILAISD+ECLVNNG+PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
         F YA+ PKF F  +SSQ++CS
Subjt:  NFTYARDPKFKFDLISSQVACS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like

6.5e-42

69.67

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        MAI +K L  LL LS +STGNCQC  NNI I+Q  TGFQIHGMT+W VTI+NNCICSQS++KLDC+GF T  SIDPSIL+ISD ECLVNNG+PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
         F YA+ PKF F  ISSQ++CS
Subjt:  NFTYARDPKFKFDLISSQVACS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like

6.5e-42

69.67

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        MAI +K L  LL LS +STGNCQC  NNI I+Q  TGFQIHGMT+W VTI+NNCICSQS++KLDC+GF T  SIDPSIL+ISD ECLVNNG+PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
         F YA+ PKF F  ISSQ++CS
Subjt:  NFTYARDPKFKFDLISSQVACS

A0A6J1HGA0 uncharacterized protein At1g05835-like

2.3e-39

67.21

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        MA   K    LLF+S LS  N QC  +NI I Q+ TGFQIHGMT+W  T+SNNC+CSQS VKLDCRGFQT +SIDP ILAI+DTECLVNNG PIFN  PI
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
         FTYA++P+F F  ISSQ+ACS
Subjt:  NFTYARDPKFKFDLISSQVACS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like

1.3e-42

70.49

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        MA F K    LLF+SLL  GNCQC SN+I I QT +GFQIHGMT+W VTISN C+CSQS VKLDCRGFQT +SIDPS+LA++D+ECLVNNG PIF  N I
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQVACS
         FTYA DPKF F LISSQ+ CS
Subjt:  NFTYARDPKFKFDLISSQVACS

SwissProt top hits

e value

%identity

Alignment

Q6TLJ2 Protein TAPETUM DETERMINANT 1

6.6e-07

31.07

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Query:  QCESNNIQINQTRTGFQIHGMTQWKVTISNNCI--CSQSNVKLDCRGFQTIESIDPSIL-AISDTECLVNNGRPIFNFNPINFTYARDPKFKFDLISSQV
        +C+S +I +NQ  T    +G+  + V I+N C+  C  S + ++C  F + + I+P +   I   +CLVNNG+P+   + ++F YA    F + L  + V
Subjt:  QCESNNIQINQTRTGFQIHGMTQWKVTISNNCI--CSQSNVKLDCRGFQTIESIDPSIL-AISDTECLVNNGRPIFNFNPINFTYARDPKFKFDLISSQV

Query:  ACS
         C+
Subjt:  ACS

Arabidopsis top hits

e value

%identity

Alignment

AT4G24972.1 tapetum determinant 1

4.7e-08

31.07

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Query:  QCESNNIQINQTRTGFQIHGMTQWKVTISNNCI--CSQSNVKLDCRGFQTIESIDPSIL-AISDTECLVNNGRPIFNFNPINFTYARDPKFKFDLISSQV
        +C+S +I +NQ  T    +G+  + V I+N C+  C  S + ++C  F + + I+P +   I   +CLVNNG+P+   + ++F YA    F + L  + V
Subjt:  QCESNNIQINQTRTGFQIHGMTQWKVTISNNCI--CSQSNVKLDCRGFQTIESIDPSIL-AISDTECLVNNGRPIFNFNPINFTYARDPKFKFDLISSQV

Query:  ACS
         C+
Subjt:  ACS

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein

2.3e-15

37.82

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Query:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI
        MA  LK    +L LS++S G C C    IQI   RTG +I G  +WKVT+ N C C Q +V L C GF   + + P +L      CL+  G  +      
Subjt:  MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPI

Query:  NFTYARDPKFKFDLISSQV
         FTYA  P + F  + S+V
Subjt:  NFTYARDPKFKFDLISSQV

Sequences

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CDS sequence

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ATGGCCATCTTCCTCAAGTTTCTCACACCTCTTCTCTTTCTCTCTCTCCTTTCCACAGGAAATTGTCAATGTGAATCGAACAACATACAAATCAATCAAACGAGGACTGG
TTTTCAGATACATGGAATGACACAATGGAAGGTGACAATAAGCAACAACTGCATATGTTCTCAGTCCAACGTGAAATTAGATTGCAGAGGATTTCAAACCATTGAAAGCA
TCGATCCTTCCATCTTAGCAATTTCCGACACCGAGTGTTTGGTTAACAACGGTCGCCCAATTTTCAATTTCAATCCCATCAACTTCACTTATGCACGAGACCCTAAATTC
AAGTTCGACCTGATCTCCTCCCAAGTTGCTTGTTCTTAA

mRNA sequence

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Protein sequence

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MAIFLKFLTPLLFLSLLSTGNCQCESNNIQINQTRTGFQIHGMTQWKVTISNNCICSQSNVKLDCRGFQTIESIDPSILAISDTECLVNNGRPIFNFNPINFTYARDPKF
KFDLISSQVACS

CmoCh14G010070 (gene) of Cucurbita moschata (Rifu) v1 genome