CuGenDBv2

Gene ID	CmoCh14G010180
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Cellulose synthase
Genome location	Cmo_Chr14:5524071..5526000
RNA-Seq Expression	CmoCh14G010180
Synteny	CmoCh14G010180
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581574.1 hypothetical protein SDJN03_21576, partial [Cucurbita argyrosperma subsp. sororia]

7.5e-65

97.81

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRLDYMLRL+EEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM
        GEIERE+EMIMVEKSRKKPKKSFKQLFQHCMTGS KM
Subjt:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM

KAG7018080.1 hypothetical protein SDJN02_19946 [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-64

97.08

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRLDYMLRL+EEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM
        GEIERE+EMIMVEKSRKKPKKSFKQLFQHCM GS KM
Subjt:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM

XP_004151057.1 uncharacterized protein LOC101205386 [Cucumis sativus]

1.1e-47

76.3

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MA+ EEPILSRLDRLD MLR LEEI+G  KS KSSC S+P SG  TSDYHTSSVDLSP+SLEK CRPIN  VKV ELKGSL+ERMD +EDRVLKLC+QVE
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSG
        G++EREK+MIMVEK  +KPK+SFKQL Q CMTG G
Subjt:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSG

XP_022934271.1 uncharacterized protein LOC111441483 [Cucurbita moschata]

2.3e-66

100

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM
        GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM
Subjt:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM

XP_023528604.1 uncharacterized protein LOC111791474 [Cucurbita pepo subsp. pepo]

3.6e-59

89.78

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRL ++LR++EEIKG SKS KSSCTSSP SGAHTSDYHTSSVDLSPRSLEK CRP+NDAVKVTELKGSLLER+DKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM
        GEIERE+EMIMVEKSRKKPKKSFKQL QHCMTGSGK+
Subjt:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCD9 Uncharacterized protein

5.3e-48

76.3

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MA+ EEPILSRLDRLD MLR LEEI+G  KS KSSC S+P SG  TSDYHTSSVDLSP+SLEK CRPIN  VKV ELKGSL+ERMD +EDRVLKLC+QVE
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSG
        G++EREK+MIMVEK  +KPK+SFKQL Q CMTG G
Subjt:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSG

A0A1S3CFF4 uncharacterized protein LOC103500315

2.6e-47

76.47

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MA+ EEPILSRLDRLD MLR LEEIKG +KS KSSC S+P SG  TSDYHTSSVDLSP+SLEK CRPIN  V+V ELKGSL+ERMD +EDRVLKLC+QVE
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMV-EKSRKKPKKSFKQLFQHCMTGSG
        GE+EREK+M+MV +K +KKPKKSFKQL Q CMTG G
Subjt:  GEIEREKEMIMV-EKSRKKPKKSFKQLFQHCMTGSG

A0A5A7U299 Uncharacterized protein

2.6e-47

76.47

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MA+ EEPILSRLDRLD MLR LEEIKG +KS KSSC S+P SG  TSDYHTSSVDLSP+SLEK CRPIN  V+V ELKGSL+ERMD +EDRVLKLC+QVE
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMV-EKSRKKPKKSFKQLFQHCMTGSG
        GE+EREK+M+MV +K +KKPKKSFKQL Q CMTG G
Subjt:  GEIEREKEMIMV-EKSRKKPKKSFKQLFQHCMTGSG

A0A6J1F1D1 uncharacterized protein LOC111441483

1.1e-66

100

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM
        GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM
Subjt:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSGKM

A0A6J1GBV3 uncharacterized protein LOC111452747

7.1e-45

76.3

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE
        M + EEPILSRL+RLD MLR LEEI+G  KS KSSC S+P SG  TSDY TSSVDLSP++LEK CRPIN  VKVTEL+GSL+ERMD IEDRVLKLCLQ+E
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVE

Query:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSG
        GEIEREKEMIMVEK R KPKKSFKQL Q C  G G
Subjt:  GEIEREKEMIMVEKSRKKPKKSFKQLFQHCMTGSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G07985.1 Expressed protein

1.7e-19

50.81

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Query:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDL-SPRSLEK-QCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQ
        MA+ EEPILSRLDR+D+M+R LEE+KG S   +SS  S+P SG        SS+DL SPRS+ K  CR +    + TE KG+LLER++ +E++VLKLC Q
Subjt:  MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDL-SPRSLEK-QCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQ

Query:  VEGEIERE-KEMIMVEKSRKKPKK
         E E+E E K     +K +K PKK
Subjt:  VEGEIERE-KEMIMVEKSRKKPKK

Sequences

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CDS sequence

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ATGGCACTTGGCGAGGAACCGATTCTCTCGCGGTTGGACCGGCTGGATTATATGTTGAGGCTGCTGGAGGAAATTAAAGGGGACAGCAAGTCAGTAAAGAGCTCGTGTAC
ATCTTCCCCGTTAAGTGGGGCCCACACGAGCGATTATCACACATCGTCCGTTGATCTGTCTCCAAGAAGTCTGGAGAAGCAGTGCCGTCCGATCAACGACGCAGTCAAAG
TCACTGAACTCAAAGGAAGCCTTCTCGAGAGAATGGACAAGATTGAGGATAGAGTCCTCAAGCTTTGTTTGCAAGTAGAGGGAGAGATTGAAAGGGAGAAGGAGATGATA
ATGGTTGAGAAGAGTAGGAAGAAGCCTAAGAAGAGCTTTAAACAACTTTTTCAACACTGTATGACCGGGTCGGGAAAGATGTGA

mRNA sequence

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TTTGTATTAAACCCCAAATATTTTGTTTTCTGAATTTTCTGTTTGTTTCCCGGGAAAATGGCACTTGGCGAGGAACCGATTCTCTCGCGGTTGGACCGGCTGGATTATAT
GTTGAGGCTGCTGGAGGAAATTAAAGGGGACAGCAAGTCAGTAAAGAGCTCGTGTACATCTTCCCCGTTAAGTGGGGCCCACACGAGCGATTATCACACATCGTCCGTTG
ATCTGTCTCCAAGAAGTCTGGAGAAGCAGTGCCGTCCGATCAACGACGCAGTCAAAGTCACTGAACTCAAAGGAAGCCTTCTCGAGAGAATGGACAAGATTGAGGATAGA
GTCCTCAAGCTTTGTTTGCAAGTAGAGGGAGAGATTGAAAGGGAGAAGGAGATGATAATGGTTGAGAAGAGTAGGAAGAAGCCTAAGAAGAGCTTTAAACAACTTTTTCA
ACACTGTATGACCGGGTCGGGAAAGATGTGACGGTCTCGATCAATGTATGACTCGCGTGATGACTTGACTTCACTTGACCTTTTCATTCCGAGTTGGATAGTTTTGGTTG
ATGAGCATTGTGTACACTGATCGTCAATCAAATTATGTTGTCCAAATTTAACTGGTAGGACATTTTAATAGGAGGGTTCAGGGTTAACCCTGAATTTGTTTAGATAAGGT
CGGGTGTCTTGTTCTTGTAATGTCATTTATACAATCAACTTGTAATTATATAAATACTTCGATCCGAGCATTTTCGTTTATGTGAACACATTTGAGTGGGATACCCTATA
T

Protein sequence

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MALGEEPILSRLDRLDYMLRLLEEIKGDSKSVKSSCTSSPLSGAHTSDYHTSSVDLSPRSLEKQCRPINDAVKVTELKGSLLERMDKIEDRVLKLCLQVEGEIEREKEMI
MVEKSRKKPKKSFKQLFQHCMTGSGKM

CmoCh14G010180 (gene) of Cucurbita moschata (Rifu) v1 genome