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CmoCh14G010640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G010640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr14:5857116..5857814
RNA-Seq ExpressionCmoCh14G010640
SyntenyCmoCh14G010640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581619.1 hypothetical protein SDJN03_21621, partial [Cucurbita argyrosperma subsp. sororia]4.5e-5094.07Show/hide
Query:  MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSFNSQPLQHHHKLLVSGWDDGEENTTAVNSVVLKAKGGRSGSAGAGTNNHRPGKAKNAAASFFEFNI
        MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSFNSQPLQHHH+LLVSG DDGEENTT V  VVLKAKGGRSGSAGAGTNNHRPGKAKNAAAS FEFNI
Subjt:  MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSFNSQPLQHHHKLLVSGWDDGEENTTAVNSVVLKAKGGRSGSAGAGTNNHRPGKAKNAAASFFEFNI

Query:  IYFVLNSVGLFLFFYISS
        IYFVLNS GLFLFFYISS
Subjt:  IYFVLNSVGLFLFFYISS
KAG6606846.1 hypothetical protein SDJN03_00188, partial [Cucurbita argyrosperma subsp. sororia]8.8e-0644.64Show/hide
Query:  MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSFNSQPLQHHHKLLVSGWDD--GEENTTAVNSVVLKAK-GGRSGSAGAGTNNHRPGKA--KNAAASF
        MG YACLLISLLL FQ  + S L +     SNHS NS PL     ++  G  D  GE+N T    VVL+A+ GGRS  AG    N RP +A  KNAA++ 
Subjt:  MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSFNSQPLQHHHKLLVSGWDD--GEENTTAVNSVVLKAK-GGRSGSAGAGTNNHRPGKA--KNAAASF

Query:  FEFNIIYFVLNS
        F   +   +++S
Subjt:  FEFNIIYFVLNS
KGN58897.2 hypothetical protein Csa_001334 [Cucumis sativus]9.8e-1351.59Show/hide
Query:  MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSF-----NSQPLQHHH---KLLVSGWDDGEENTTAVNS-VVLKAK-GGRSGSAGAGTNNHRPGKAKN
        MGVYACLLISLLLI QT  ISSLSN     SN+SF     ++ PLQ HH   +  + G    E N TA  S  V KAK GGRSG+ GAG NNHRPGKAKN
Subjt:  MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSF-----NSQPLQHHH---KLLVSGWDDGEENTTAVNS-VVLKAK-GGRSGSAGAGTNNHRPGKAKN

Query:  AAASFFEFNIIYFVLNSVGLFLFFYI
        AA++    N    ++ ++ L  F Y+
Subjt:  AAASFFEFNIIYFVLNSVGLFLFFYI
TrEMBL top hitse value%identityAlignment
A0A0A0LCI5 Uncharacterized protein9.5e-1451.56Show/hide
Query:  MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSF-----NSQPLQHHH-----KLLVSGWDDGEENTTAVNS-VVLKAK-GGRSGSAGAGTNNHRPGKA
        MGVYACLLISLLLI QT  ISSLSN     SN+SF     ++ PLQ HH     +L+  G    E N TA  S  V KAK GGRSG+ GAG NNHRPGKA
Subjt:  MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSF-----NSQPLQHHH-----KLLVSGWDDGEENTTAVNS-VVLKAK-GGRSGSAGAGTNNHRPGKA

Query:  KNAAASFFEFNIIYFVLNSVGLFLFFYI
        KNAA++    N    ++ ++ L  F Y+
Subjt:  KNAAASFFEFNIIYFVLNSVGLFLFFYI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTATATGCATGCCTCCTTATTTCCCTCTTATTAATCTTTCAAACTCATTCCATTTCTTCCCTTTCCAATGGATCTCTTCCCATTTCCAACCACTCATTCAACTC
TCAACCCCTTCAACACCATCATAAACTTTTGGTGAGCGGATGGGACGACGGAGAAGAGAATACGACCGCGGTGAATTCGGTTGTTTTAAAGGCTAAAGGGGGAAGGTCAG
GCAGCGCCGGGGCGGGCACCAACAACCACCGGCCGGGGAAGGCGAAGAACGCAGCTGCGAGTTTCTTTGAGTTTAATATAATTTACTTTGTTCTCAACTCTGTTGGTCTC
TTCCTATTCTTCTATATCAGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TCCTCTCTTTCTTTCACTTTACCTTGACATATCCAAGCTCCTCTATAATAACCTACTCTCACAGCTATGGCTATGGCTATGGCTATCACCTAGCAAACAAAAAGGGGCAT
TAGATATCATGGGAGTATATGCATGCCTCCTTATTTCCCTCTTATTAATCTTTCAAACTCATTCCATTTCTTCCCTTTCCAATGGATCTCTTCCCATTTCCAACCACTCA
TTCAACTCTCAACCCCTTCAACACCATCATAAACTTTTGGTGAGCGGATGGGACGACGGAGAAGAGAATACGACCGCGGTGAATTCGGTTGTTTTAAAGGCTAAAGGGGG
AAGGTCAGGCAGCGCCGGGGCGGGCACCAACAACCACCGGCCGGGGAAGGCGAAGAACGCAGCTGCGAGTTTCTTTGAGTTTAATATAATTTACTTTGTTCTCAACTCTG
TTGGTCTCTTCCTATTCTTCTATATCAGTTCTTAAGAAGGAATCATAAGAAAGGATAAGTATCTTTTTGGTTTTGTTTGAGGAAAGTTTAGTTATGAATCACTTATACAT
GTATACATATGGATCATGGCATGATATGTTATGGATTGATGAATAAATTGGACTTTAATGTTACGGCCA
Protein sequenceShow/hide protein sequence
MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSFNSQPLQHHHKLLVSGWDDGEENTTAVNSVVLKAKGGRSGSAGAGTNNHRPGKAKNAAASFFEFNIIYFVLNSVGL
FLFFYISS