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CmoCh14G010770 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G010770
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome locationCmo_Chr14:5996470..5998360
RNA-Seq ExpressionCmoCh14G010770
SyntenyCmoCh14G010770
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHD47166.1 NADH-plastoquinone oxidoreductase subunit 1 [Dalbergia sissoo]2.0e-2383.61Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIV+AQSKYDFW WNLW QPIGF++FL+SSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

YP_009316362.1 NADH-plastoquinone oxidoreductase subunit 1 [Castilleja paramensis]1.2e-2386.89Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIVEAQSKY FW WNLW QPIGF++FLISSLA+CKRLPFDLP+ EEELVAGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

YP_009574702.1 NADH dehydrogenase subunit 1 [Carya illinoinensis]1.5e-2375.68Show/hide
Query:  VSLRSKGMTPPIFLSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        +SLRS        LSTVDIVEAQSKY FW WNLW QPIGF++FLISSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  VSLRSKGMTPPIFLSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

YP_009650962.1 NADH-plastoquinone oxidoreductase subunit 1 [Hydnocarpus hainanensis]1.2e-2388.33Show/hide
Query:  STVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        STVDIVEAQSKYDFW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  STVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

YP_009681018.1 NdhA [Dalbergia cultrata]2.0e-2383.61Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIV+AQSKYDFW WNLW QPIGF++FL+SSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

TrEMBL top hitse value%identityAlignment
A0A1D6YY71 NADH-quinone oxidoreductase subunit H5.7e-2486.89Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIVEAQSKY FW WNLW QPIGF++FLISSLA+CKRLPFDLP+ EEELVAGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

A0A411PP69 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic7.5e-2475.68Show/hide
Query:  VSLRSKGMTPPIFLSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        +SLRS        LSTVDIVEAQSKY FW WNLW QPIGF++FLISSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  VSLRSKGMTPPIFLSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

A0A4Y5REE8 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic5.7e-2488.33Show/hide
Query:  STVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        STVDIVEAQSKYDFW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  STVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

A0A4Y6I3B3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic9.8e-2483.61Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIV+AQSKYDFW WNLW QPIGF++FL+SSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

A0A7N0UX97 Uncharacterized protein5.7e-2469.14Show/hide
Query:  MKFLNAVVSLRSKGMTPPIFLSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        M  L+ + S+  KG+      STVDIVEAQSKY  W WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  MKFLNAVVSLRSKGMTPPIFLSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

SwissProt top hitse value%identityAlignment
A4QJH1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic3.5e-2686.89Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

A4QJQ5 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic3.5e-2686.89Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEELVAGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

A4QK75 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic4.5e-2685.25Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEEL+AGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

A4QKG2 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic4.5e-2685.25Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEEL+AGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

Q37165 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic4.5e-2685.25Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEEL+AGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

Arabidopsis top hitse value%identityAlignment
ATCG01100.1 NADH dehydrogenase family protein3.2e-2785.25Show/hide
Query:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        LSTVDIVEAQSKY FW WNLW QPIGF+IFLISSLA+C+RLPFDLP+ EEEL+AGYQTEYS
Subjt:  LSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

ATMG00516.1 NADH dehydrogenase 1C5.3e-0664.71Show/hide
Query:  VIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        V+FLIS LA+  R PFDLP+ E E VAGY  EYS
Subjt:  VIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

ATMG01120.1 NADH dehydrogenase 1B5.3e-0664.71Show/hide
Query:  VIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        V+FLIS LA+  R PFDLP+ E E VAGY  EYS
Subjt:  VIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS

ATMG01275.1 NADH dehydrogenase 1A5.3e-0664.71Show/hide
Query:  VIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS
        V+FLIS LA+  R PFDLP+ E E VAGY  EYS
Subjt:  VIFLISSLAKCKRLPFDLPKVEEELVAGYQTEYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGACGTTGCTTTCTCCGAGTTTGATTCTTTGGAATTTTGGGACGCCGTAGTGTTGCTGAAATTGAAGAGAGCCGTTATGTTCTCGGAGCTCGATTCTATGAAATTTTT
GAACGCCGTAGTGTCGCTAAGATCGAAGGGTATGACACCACCGATCTTTTTGAGTACAGTTGATATAGTTGAGGCTCAATCAAAATATGATTTTTGGAGGTGGAATTTGT
GGCATCAACCTATAGGGTTTGTTATTTTTCTAATTTCTTCCTTAGCAAAATGTAAGAGGTTACCTTTTGATTTACCAAAAGTGGAAGAAGAATTAGTAGCGGGTTATCAA
ACCGAGTATTCA
mRNA sequenceShow/hide mRNA sequence
AAAGACGTTGCTTTCTCCGAGTTTGATTCTTTGGAATTTTGGGACGCCGTAGTGTTGCTGAAATTGAAGAGAGCCGTTATGTTCTCGGAGCTCGATTCTATGAAATTTTT
GAACGCCGTAGTGTCGCTAAGATCGAAGGGTATGACACCACCGATCTTTTTGAGTACAGTTGATATAGTTGAGGCTCAATCAAAATATGATTTTTGGAGGTGGAATTTGT
GGCATCAACCTATAGGGTTTGTTATTTTTCTAATTTCTTCCTTAGCAAAATGTAAGAGGTTACCTTTTGATTTACCAAAAGTGGAAGAAGAATTAGTAGCGGGTTATCAA
ACCGAGTATTCA
Protein sequenceShow/hide protein sequence
KDVAFSEFDSLEFWDAVVLLKLKRAVMFSELDSMKFLNAVVSLRSKGMTPPIFLSTVDIVEAQSKYDFWRWNLWHQPIGFVIFLISSLAKCKRLPFDLPKVEEELVAGYQ
TEYS