CuGenDBv2

Gene ID	CmoCh14G010950
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Genome location	Cmo_Chr14:6908664..6909038
RNA-Seq Expression	CmoCh14G010950
Synteny	CmoCh14G010950
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:2001295 - malonyl-CoA biosynthetic process (biological process) GO:0009317 - acetyl-CoA carboxylase complex (cellular component) GO:0009570 - chloroplast stroma (cellular component) GO:0003989 - acetyl-CoA carboxylase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0016743 - carboxyl- or carbamoyltransferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6585912.1 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-19

86.67

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQIK GLTEAIQ GTGKLN IPIAIGIMD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

RWR98296.1 acetyl-CoA carboxylase carboxyltransferase beta subunit chloroplast [Cinnamomum micranthum f. kanehirae]

3.5e-20

57.43

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWGYGICS-------RRENHPFDR-------CVLMEEHACKKE
        MDEDMVS+DPIEFHSEEEPY+D I+SYQ K GLTEA+Q G G+LN IPIAIG+MD    G  + S       R   +  +R       CVL+EEHACKKE
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWGYGICS-------RRENHPFDR-------CVLMEEHACKKE

Query:  L
        +
Subjt:  L

XP_023521964.1 uncharacterized protein LOC111785813 [Cucurbita pepo subsp. pepo]

1.7e-19

86.67

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQIK GLTEAIQ GTGKLN IPIAIGIMD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

YP_009447459.1 acetyl-CoA carboxylase beta subunit [Cucurbita maxima]

1.7e-19

86.67

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQIK GLTEAIQ GTGKLN IPIAIGIMD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

YP_009447544.1 acetyl-CoA carboxylase beta subunit [Cucurbita moschata]

1.7e-19

86.67

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQIK GLTEAIQ GTGKLN IPIAIGIMD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

TrEMBL top hits

e value

%identity

Alignment

A0A2H4T210 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

8.4e-20

86.67

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQIK GLTEAIQ GTGKLN IPIAIGIMD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

A0A2H4T291 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

8.4e-20

86.67

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQIK GLTEAIQ GTGKLN IPIAIGIMD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

A0A344AXQ6 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

8.4e-20

86.67

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQIK GLTEAIQ GTGKLN IPIAIGIMD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

A0A443Q5J5 Acetyl-CoA carboxylase carboxyltransferase beta subunit chloroplast

1.7e-20

57.43

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWGYGICS-------RRENHPFDR-------CVLMEEHACKKE
        MDEDMVS+DPIEFHSEEEPY+D I+SYQ K GLTEA+Q G G+LN IPIAIG+MD    G  + S       R   +  +R       CVL+EEHACKKE
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWGYGICS-------RRENHPFDR-------CVLMEEHACKKE

Query:  L
        +
Subjt:  L

R9ZQ62 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

4.1e-19

81.67

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQIK GLTEA+Q GTG+LN IP+AIGIMD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

SwissProt top hits

e value

%identity

Alignment

P49158 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

7.3e-21

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQ K GLTEA+Q GTG+LN IP+AIGIMD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

Q09X08 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.1e-20

78.33

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEF+SEEEPYKD IDSYQ K GLTEA+Q GTGKLN IP+AIG+MD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

Q2MI91 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.8e-20

55.79

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWGYGICSRRENHPFDRCVLMEEHACKKELELHLFSIS
        MDEDMVSLDPIEFHSEEEPYKD IDSYQ K GLTEA+Q G G+LN IP+AIG+MD    G  + S       ++   + EHA  + L L +   S
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWGYGICSRRENHPFDRCVLMEEHACKKELELHLFSIS

Q49KY9 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

1.2e-20

78.33

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD IDSYQ K GLT+A+Q GTG+LN IPIAIG+MD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

Q68RZ7 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

3.6e-20

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVSLDPIEFHSEEEPYKD +DSYQ K GLTEA+Q G G+LN IP+AIG+MD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

Arabidopsis top hits

e value

%identity

Alignment

ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta

2.2e-17

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Query:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG
        MDEDMVS DPI+FHS+EEPYK+ IDS Q   GLT+A+Q GTG+LN IP+A+G+MD    G
Subjt:  MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWG

Sequences

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CDS sequence

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ATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCATATTGATTCTTATCAAATAAAGGCAGGATTAACTGAGGCTAT
TCAAAAAGGCACAGGGAAATTAAACTGTATTCCCATAGCAATTGGGATTATGGATTTAAGTTTATGGGGGTATGGGATCTGTAGTAGGCGAGAAAATCACCCGTTTGATC
GATGTGTGCTTATGGAGGAGCACGCATGCAAGAAGGAACTGGAGTTACATCTCTTTTCTATTTCCATTCCAGAGTTTTTATGTGTTTCCACGCCCCTTCGAGACCCCGAA
AAATGA

mRNA sequence

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Protein sequence

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MDEDMVSLDPIEFHSEEEPYKDHIDSYQIKAGLTEAIQKGTGKLNCIPIAIGIMDLSLWGYGICSRRENHPFDRCVLMEEHACKKELELHLFSISIPEFLCVSTPLRDPE
K

CmoCh14G010950 (gene) of Cucurbita moschata (Rifu) v1 genome