CuGenDBv2

Gene ID	CmoCh14G010960
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Genome location	Cmo_Chr14:6909429..6910420
RNA-Seq Expression	CmoCh14G010960
Synteny	CmoCh14G010960
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR006137 - NADH:ubiquinone oxidoreductase-like, 20kDa subunit IPR006138 - NADH-ubiquinone oxidoreductase, 20 Kd subunit

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QIT04137.1 NADH dehydrogenase subunit K [Sechium edule]

1.6e-80

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

YP_009004048.1 NADH-plastoquinone oxidoreductase subunit K [Cucumis hystrix]

1.6e-80

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

YP_009430631.1 NADH dehydrogenase subunit K [Gynostemma cardiospermum]

1.6e-80

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

YP_009753878.1 NADH dehydrogenase subunit K [Trichosanthes lobata]

1.6e-80

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

YP_009945421.1 NADH-plastoquinone oxidoreductase subunit K [Sechium edule]

1.6e-80

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU13 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

7.9e-81

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

A0A1X9Q1M2 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

7.9e-81

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

A0A218KG48 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

7.9e-81

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

A0A249RZA1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

7.9e-81

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

A0A410HF89 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

7.9e-81

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

SwissProt top hits

e value

%identity

Alignment

B0Z4L3 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

6.2e-83

96.15

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EA+IDAITKLRKKISREIYEDRI+SQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

B0Z4U7 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

6.2e-83

96.15

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EA+IDAITKLRKKISREIYEDRI+SQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

B0Z531 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

6.2e-83

96.15

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EA+IDAITKLRKKISREIYEDRI+SQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

Q4VZH1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

2.1e-83

97.44

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

Q9MTP4 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

6.2e-83

96.15

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM
        KLIPVDVYLPGCPPK EA+IDAITKLRKKISREIYEDRI+SQEENRCFTTNHKFH+
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHM

Arabidopsis top hits

e value

%identity

Alignment

AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial

5.9e-36

47.76

Show/hide

Query:  MIFSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRG
        M ++   S+WP+ +G +CC +E      +R+D DR+G++ R SPRQ+D ++ AGT+T KMAP+L ++Y+QMPEP++VI+MG+C   GG +   SYS VRG
Subjt:  MIFSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRG

Query:  VDKLIPVDVYLPGCPPKLEAVIDAITKLRKKISR
         D+++PVD+Y+PGCPP  EA++  + +L+KKI+R
Subjt:  VDKLIPVDVYLPGCPPKLEAVIDAITKLRKKISR

ATCG00430.1 photosystem II reaction center protein G

1.0e-80

94.16

Show/hide

Query:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
        +S LSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD
Subjt:  FSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVD

Query:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKF
        KLIPVDVYLPGCPPK EAVIDAITKLRKKI+REIY+DRI+ Q+ NRCFTTNHKF
Subjt:  KLIPVDVYLPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATATTTTCTGGACTCTCCAGTTTATGGCCGCTTCTCTATGGTACCAGTTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGG
ACTGGTACCAAGATCTAGTCCTAGACAGGCAGACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAAC
CAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTAT
TTGCCGGGTTGTCCACCTAAACTCGAGGCTGTTATAGATGCAATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAA
TCGGTGTTTTACTACCAACCACAAATTCCATATGTTTATAAAGCACTTCCCTAAGTTTCTATTTTTGAAAGATACGCGGATGGATAAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MIFSGLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVY
LPGCPPKLEAVIDAITKLRKKISREIYEDRIKSQEENRCFTTNHKFHMFIKHFPKFLFLKDTRMDK

CmoCh14G010960 (gene) of Cucurbita moschata (Rifu) v1 genome