; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G011000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G011000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description30S ribosomal protein S14, chloroplastic
Genome locationCmo_Chr14:7109219..7109489
RNA-Seq ExpressionCmoCh14G011000
SyntenyCmoCh14G011000
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ANJ04388.1 ribosomal protein S14 [Aconitum kusnezoffii]1.3e-3081.11Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ
        REKKRQ+LEQKYHLIR+S KKEI KVPSLS+KWEIHGKLQS PRNSAPT LHR     +DRELTIETLGYLDTYFVKWFMH C   QQDQ
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ

YP_009309959.1 ribosomal protein S14 [Coreanomecon hylomeconoides]1.5e-1866.67Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL
        REKKRQKLEQKYHLIR+SLKKEISKVPSLS+KWEIHGKLQSPPRNSAPT LHR+          Y    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL

YP_009338159.1 ribosomal protein S14 [Gymnaconitum gymnandrum]1.3e-3081.11Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ
        REKKRQ+LEQKYHLIR+S KKEI KVPSLS+KWEIHGKLQS PRNSAPT LHR     +DRELTIETLGYLDTYFVKWFMH C   QQDQ
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ

YP_009447448.1 ribosomal protein S14 [Cucurbita maxima]6.6e-1969.05Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQ----DRELTIETLGYLDTYFVKWFMHACCL
        REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPT LHR+     R    +    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQ----DRELTIETLGYLDTYFVKWFMHACCL

YP_009752241.1 ribosomal protein S14 [Trichosanthes baviensis]1.9e-1867.86Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL
        REKKRQKLEQKYHLIR+SLKKEISKVPSLSEKWEIHGKLQSPPRNSAPT LHR+          Y    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL

TrEMBL top hitse value%identityAlignment
A0A023HNA1 Ribosomal protein S146.2e-3181.11Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ
        REKKRQ+LEQKYHLIR+S KKEI KVPSLS+KWEIHGKLQS PRNSAPT LHR     +DRELTIETLGYLDTYFVKWFMH C   QQDQ
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ

A0A0S2IDI8 Ribosomal protein S143.2e-1969.05Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQ----DRELTIETLGYLDTYFVKWFMHACCL
        REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPT LHR+     R    +    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQ----DRELTIETLGYLDTYFVKWFMHACCL

A0A0S2IGB5 Ribosomal protein S143.2e-1969.05Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQ----DRELTIETLGYLDTYFVKWFMHACCL
        REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPT LHR+     R    +    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQ----DRELTIETLGYLDTYFVKWFMHACCL

A0A1L2E0J3 Ribosomal protein S146.2e-3181.11Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ
        REKKRQ+LEQKYHLIR+S KKEI KVPSLS+KWEIHGKLQS PRNSAPT LHR     +DRELTIETLGYLDTYFVKWFMH C   QQDQ
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ

A0A1L2E0J4 Ribosomal protein S146.2e-3181.11Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ
        REKKRQ+LEQKYHLIR+S KKEI KVPSLS+KWEIHGKLQS PRNSAPT LHR     +DRELTIETLGYLDTYFVKWFMH C   QQDQ
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHR-----QDRELTIETLGYLDTYFVKWFMHACCLQQQDQ

SwissProt top hitse value%identityAlignment
A4QJT1 30S ribosomal protein S14, chloroplastic6.2e-2063.1Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL
        REKKRQKLE+KYHLIR+S KKEISK+PSLSEKW+IHGKLQSPPRNSAPT LHR+          Y    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL

A4QK16 30S ribosomal protein S14, chloroplastic6.2e-2063.1Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL
        REKKRQKLEQKYHLIR+S KKEIS++PSLSEKW+IHGKLQSPPRNSAPT LHR+          Y    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL

A6MM34 30S ribosomal protein S14, chloroplastic3.6e-2064.29Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL
        REKKR+KLEQKYHLIR+S KKEISKVPSLS+KWEIHGKLQSPPRNSAPT LHR+          Y    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL

B1NWE8 30S ribosomal protein S14, chloroplastic2.8e-2064.29Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL
        REKKRQKLEQKYHL+R+S KKEISKVPSLS+KWEIHGKLQSPPRNSAPT LHR+          Y    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL

Q4VZN5 30S ribosomal protein S14, chloroplastic3.3e-2167.86Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL
        REKKRQKLEQKYHLIRQSLK EISKVPSLSEKWEIHGKLQSPPRNSAPT LHR+          Y    L  + ++  +HAC L
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGY----LDTYFVKWFMHACCL

Arabidopsis top hitse value%identityAlignment
ATCG00330.1 chloroplast ribosomal protein S142.8e-2087.04Show/hide
Query:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQ
        REKKRQKLE+KYHLIR+S KKEISK+PSLSEKW+IHGKLQSPPRNSAPT LHR+
Subjt:  REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCAATCCTTAAAAAAAGAAATAAGCAAAGTTCCATCGTTGAGTGAGAAATGGGAAATTCATGG
AAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACATCTTCATCGACAAGATAGAGAGCTAACGATCGAGACTTTGGGCTATCTGGACACATACTTCGTGAAATGGT
TCATGCATGCTTGTTGCCTGCAGCAACAAGATCAA
mRNA sequenceShow/hide mRNA sequence
AGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCAATCCTTAAAAAAAGAAATAAGCAAAGTTCCATCGTTGAGTGAGAAATGGGAAATTCATGG
AAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACATCTTCATCGACAAGATAGAGAGCTAACGATCGAGACTTTGGGCTATCTGGACACATACTTCGTGAAATGGT
TCATGCATGCTTGTTGCCTGCAGCAACAAGATCAA
Protein sequenceShow/hide protein sequence
REKKRQKLEQKYHLIRQSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTHLHRQDRELTIETLGYLDTYFVKWFMHACCLQQQDQ