; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G011030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G011030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCytochrome c biogenesis protein CcsA
Genome locationCmo_Chr14:7291672..7292664
RNA-Seq ExpressionCmoCh14G011030
SyntenyCmoCh14G011030
Gene Ontology termsGO:0017004 - cytochrome complex assembly (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR002541 - Cytochrome c assembly protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5586138.1 hypothetical protein H5410_046572 [Solanum commersonii]9.9e-1239.02Show/hide
Query:  YEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVLC----------------ILCGSLFEGRSSYSDYISTLSKNWVGIIG
        Y +KN L +S IT PS+  TQGFAT+                VN+A +YD I LC                    S F G +   +     +KN+  +I 
Subjt:  YEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVLC----------------ILCGSLFEGRSSYSDYISTLSKNWVGIIG

Query:  VI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRS
         +    Y ++ +GF+ FL+IGILSGAVWANE W           KE WAFITW IFAIYLHTR+
Subjt:  VI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRS

QIT04098.1 cytochrome c biogenesis protein [Luffa aegyptiaca]7.6e-1239.38Show/hide
Query:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPIS--------LVNDASQYDGIVLCILCGSLF---------------------------------
        KNHLSVSAITAPS+ FTQGFAT+      T   +SP+         L+   S        +LCGSLF                                 
Subjt:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPIS--------LVNDASQYDGIVLCILCGSLF---------------------------------

Query:  ---EGRSSYSDYISTLSKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
           EG +   +     SKN+    +I  +    Y ++ +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIYLHTR+ K
Subjt:  ---EGRSSYSDYISTLSKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

YP_009751540.1 cytochrome c biogenesis protein [Thladiantha dubia]7.6e-1238.97Show/hide
Query:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFEGR-------------SSYSDYISTL-----
        KNHLSVSAITAPS+ FTQGFAT+       ++     SL+  A Q   +++           +LCGSLF                S  ++ ++TL     
Subjt:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFEGR-------------SSYSDYISTL-----

Query:  ------------------SKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
                          SKN+    +I  +    Y ++ +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIYLHTR+ K
Subjt:  ------------------SKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

YP_009753059.1 cytochrome c biogenesis protein [Gerrardanthus macrorhizus]4.4e-1237.68Show/hide
Query:  GFLHYSAISGIYEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQY-----DGIVL---CILCGSLFEGR---SSYSDYISTLSKN
        GF     ++ + + KNHLSVSAIT PS+ FTQGFAT+      T   +SP+ +    SQ+       +VL    +LCGSLF       ++   I  L KN
Subjt:  GFLHYSAISGIYEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQY-----DGIVL---CILCGSLFEGR---SSYSDYISTLSKN

Query:  ------------------WVGIIGVI---------------------YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIY
                          W  ++                        Y ++ +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIY
Subjt:  ------------------WVGIIGVI---------------------YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIY

Query:  LHTRSIK
        LHTR+ K
Subjt:  LHTRSIK

YP_010131149.1 cytochrome c heme attachment protein [Benincasa hispida]4.0e-1339.09Show/hide
Query:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFE---------------GRSSYSDYISTL---
        KNHLSVSAITAPS+ FTQGFAT    SG       P  LV  A Q   +++           +LCGSLF                G++   ++++ L   
Subjt:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFE---------------GRSSYSDYISTL---

Query:  --------SKNWVGIIGVIYS-------------------LVVGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
                  N V      YS                   + +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIYLHTR+ K
Subjt:  --------SKNWVGIIGVIYS-------------------LVVGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

TrEMBL top hitse value%identityAlignment
A0A6H0ENZ6 Cytochrome c biogenesis protein CcsA3.7e-1239.38Show/hide
Query:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPIS--------LVNDASQYDGIVLCILCGSLF---------------------------------
        KNHLSVSAITAPS+ FTQGFAT+      T   +SP+         L+   S        +LCGSLF                                 
Subjt:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPIS--------LVNDASQYDGIVLCILCGSLF---------------------------------

Query:  ---EGRSSYSDYISTLSKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
           EG +   +     SKN+    +I  +    Y ++ +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIYLHTR+ K
Subjt:  ---EGRSSYSDYISTLSKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

A0A6H0EP21 Cytochrome c biogenesis protein CcsA3.7e-1238.97Show/hide
Query:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFEGR-------------SSYSDYISTL-----
        KNHLSVSAITAPS+ FTQGFAT+       ++     SL+  A Q   +++           +LCGSLF                S  ++ ++TL     
Subjt:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFEGR-------------SSYSDYISTL-----

Query:  ------------------SKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
                          SKN+    +I  +    Y ++ +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIYLHTR+ K
Subjt:  ------------------SKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

A0A6H0EUZ1 Cytochrome c biogenesis protein CcsA2.2e-1237.68Show/hide
Query:  GFLHYSAISGIYEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQY-----DGIVL---CILCGSLFEGR---SSYSDYISTLSKN
        GF     ++ + + KNHLSVSAIT PS+ FTQGFAT+      T   +SP+ +    SQ+       +VL    +LCGSLF       ++   I  L KN
Subjt:  GFLHYSAISGIYEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQY-----DGIVL---CILCGSLFEGR---SSYSDYISTLSKN

Query:  ------------------WVGIIGVI---------------------YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIY
                          W  ++                        Y ++ +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIY
Subjt:  ------------------WVGIIGVI---------------------YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIY

Query:  LHTRSIK
        LHTR+ K
Subjt:  LHTRSIK

A0A7D4XNM5 Cytochrome c biogenesis protein CcsA3.7e-1239.38Show/hide
Query:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPIS--------LVNDASQYDGIVLCILCGSLF---------------------------------
        KNHLSVSAITAPS+ FTQGFAT+      T   +SP+         L+   S        +LCGSLF                                 
Subjt:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPIS--------LVNDASQYDGIVLCILCGSLF---------------------------------

Query:  ---EGRSSYSDYISTLSKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
           EG +   +     SKN+    +I  +    Y ++ +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIYLHTR+ K
Subjt:  ---EGRSSYSDYISTLSKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

A0A7T3UT97 Cytochrome c heme attachment protein1.9e-1339.09Show/hide
Query:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFE---------------GRSSYSDYISTL---
        KNHLSVSAITAPS+ FTQGFAT    SG       P  LV  A Q   +++           +LCGSLF                G++   ++++ L   
Subjt:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFE---------------GRSSYSDYISTL---

Query:  --------SKNWVGIIGVIYS-------------------LVVGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
                  N V      YS                   + +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIYLHTR+ K
Subjt:  --------SKNWVGIIGVIYS-------------------LVVGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

SwissProt top hitse value%identityAlignment
A6MM86 Cytochrome c biogenesis protein CcsA1.3e-1135.6Show/hide
Query:  KNHLSVSAITAPSSSFTQGFATA--------TSASGPTMSSRSPISLVNDASQYDGIVLC-------------------------ILCGSLFEGRSSYSD
        KNHLS+  +TAPS+ FTQGFAT+        ++   P + S+  +  V+      G +LC                         +L GS   G   Y++
Subjt:  KNHLSVSAITAPSSSFTQGFATA--------TSASGPTMSSRSPISLVNDASQYDGIVLC-------------------------ILCGSLFEGRSSYSD

Query:  YISTLSKNWVGIIGV----IYSLV------------VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
          S + +N V  + +     Y L+            +GF  FL+IGILSGAVWANE W           KE WAFITWTIFAIYLHTR+ K
Subjt:  YISTLSKNWVGIIGV----IYSLV------------VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

Q09FZ7 Cytochrome c biogenesis protein CcsA2.3e-1135.57Show/hide
Query:  IYEEKNHLSVSAITAPSSSFTQGFATA--------TSASGPTMSSRSPISLVNDASQYDGIVLC-------------------------ILCGSLFEGRS
        I   KNHL  SAITAPS+ FTQGFAT+        ++   P + S+  +  V+        +LC                         +L GS   G S
Subjt:  IYEEKNHLSVSAITAPSSSFTQGFATA--------TSASGPTMSSRSPISLVNDASQYDGIVLC-------------------------ILCGSLFEGRS

Query:  SYSDYISTLSKNWVGIIGVIY---------------SLVVGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
         Y +  S + +N   +    Y                + +GF  FL+IGILSGAVWANE W           KE WAFITWTIFAIYLHTR+ K
Subjt:  SYSDYISTLSKNWVGIIGVIY---------------SLVVGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

Q0G9H0 Cytochrome c biogenesis protein CcsA7.9e-1236.32Show/hide
Query:  IYEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFEGRSSYSDYISTLSKNWVGIIGVIYSL
        I+  KN L  SAITAPS+ FTQGFAT    SG +        LV  A Q   +++           +LCGSL     S +  + T  KN +GI+G    L
Subjt:  IYEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSLFEGRSSYSDYISTLSKNWVGIIGVIYSL

Query:  VVG-FS----------------------------------------------PFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTR
        ++G FS                                               FL+IGILSGAVWANE W           KE WAFITWTIFAIYLHTR
Subjt:  VVG-FS----------------------------------------------PFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTR

Query:  S
        +
Subjt:  S

Q2QD41 Cytochrome c biogenesis protein CcsA3.8e-1438.14Show/hide
Query:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQY-----DGIVL---CILCGSLFEGR---SSYSDYISTLSKNWVGIIGVIYS----
        KNHLSVSAITAPS+ FTQGFAT+      T   +SP+ +    S +       +VL    +LCGSLF       ++   I    KN   ++  ++S    
Subjt:  KNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQY-----DGIVL---CILCGSLFEGR---SSYSDYISTLSKNWVGIIGVIYS----

Query:  -------------------------------------LVVGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK
                                             + +GF  FLSIGILSGAVWANETW           KE WAFITWTIFAIYLHTR+ K
Subjt:  -------------------------------------LVVGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIK

Q3C1Q5 Cytochrome c biogenesis protein CcsA2.5e-1035.11Show/hide
Query:  YEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSL----------------------------F
        Y +KN L +S IT PS+ FTQGFAT    SG        + LV  A Q + +++           +LCGSL                            F
Subjt:  YEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVL----------CILCGSL----------------------------F

Query:  EGRSSYSDYISTLSKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRS
         G +   +     +KN+    +I  +    Y ++ +GF+ FL+IGILSGAVWANE W           KE WAFITW +FAIYLHTR+
Subjt:  EGRSSYSDYISTLSKNWV--GIIGVI----YSLV-VGFSPFLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRS

Arabidopsis top hitse value%identityAlignment
ATCG01040.1 Cytochrome C assembly protein1.5e-1064.58Show/hide
Query:  FLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRS
        FL++GILSGAVWANETW           KE WAFITWTIFAIYLH ++
Subjt:  FLSIGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTCTCCATTATTCAGCTATTTCGGGTATTTATGAAGAGAAAAACCATTTAAGTGTAAGCGCAATAACTGCACCAAGTAGTAGTTTTACCCAAGGGTTTGCTAC
TGCTACTTCAGCTTCAGGGCCCACTATGAGTTCCCGCTCCCCAATCTCATTGGTTAATGATGCAAGTCAGTATGATGGTATTGTGTTATGCATTTTATGTGGATCATTAT
TTGAAGGAAGGAGCTCTTATAGTGATTACATTTCCACTCTCTCTAAGAATTGGGTGGGGATCATTGGGGTTATCTATTCATTAGTTGTGGGGTTCTCTCCCTTTCTAAGC
ATAGGCATTCTTTCCGGGGCCGTATGGGCTAATGAGACGTGGATGGGGATCGTATTGGAATTGGGATCCAAAAGAAAAGAACCTTGGGCATTTATTACTTGGACCATATT
CGCCATTTATTTACATACGCGATCAATCAAAGCGAAGACTATGAATTTTGCAACAAAACCGCTGATACCCGACAATGCAAGGGAAGCCATCGATAAGATACTAACTCAAA
GTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTCTCCATTATTCAGCTATTTCGGGTATTTATGAAGAGAAAAACCATTTAAGTGTAAGCGCAATAACTGCACCAAGTAGTAGTTTTACCCAAGGGTTTGCTAC
TGCTACTTCAGCTTCAGGGCCCACTATGAGTTCCCGCTCCCCAATCTCATTGGTTAATGATGCAAGTCAGTATGATGGTATTGTGTTATGCATTTTATGTGGATCATTAT
TTGAAGGAAGGAGCTCTTATAGTGATTACATTTCCACTCTCTCTAAGAATTGGGTGGGGATCATTGGGGTTATCTATTCATTAGTTGTGGGGTTCTCTCCCTTTCTAAGC
ATAGGCATTCTTTCCGGGGCCGTATGGGCTAATGAGACGTGGATGGGGATCGTATTGGAATTGGGATCCAAAAGAAAAGAACCTTGGGCATTTATTACTTGGACCATATT
CGCCATTTATTTACATACGCGATCAATCAAAGCGAAGACTATGAATTTTGCAACAAAACCGCTGATACCCGACAATGCAAGGGAAGCCATCGATAAGATACTAACTCAAA
GTCGATAA
Protein sequenceShow/hide protein sequence
MGFLHYSAISGIYEEKNHLSVSAITAPSSSFTQGFATATSASGPTMSSRSPISLVNDASQYDGIVLCILCGSLFEGRSSYSDYISTLSKNWVGIIGVIYSLVVGFSPFLS
IGILSGAVWANETWMGIVLELGSKRKEPWAFITWTIFAIYLHTRSIKAKTMNFATKPLIPDNAREAIDKILTQSR