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CmoCh14G011040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G011040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNA-directed DNA polymerase
Genome locationCmo_Chr14:7294858..7298692
RNA-Seq ExpressionCmoCh14G011040
SyntenyCmoCh14G011040
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3452209.1 hypothetical protein FNV43_RR08307 [Rhamnella rubrinervis]6.5e-0572.22Show/hide
Query:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
        K +G+NL YYD NS  LYPYIM S+PMPG KPVWHG
Subjt:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
PKU61069.1 DNA polymerase [Dendrobium catenatum]8.4e-0549.12Show/hide
Query:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHGFRLFPGFESLALWEWSDFSGL
        K +GE+L YYD NS  LYP++M  FPMPG  PVWHG  L+P      L+   +F G+
Subjt:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHGFRLFPGFESLALWEWSDFSGL
QXT50777.1 hypothetical protein [Stipa capillata]2.5e-0469.44Show/hide
Query:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
        K +GENL YYD NS  LYPY+M +F MPG KPVWHG
Subjt:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
XP_038876624.1 DNA polymerase-like [Benincasa hispida]8.4e-0560.47Show/hide
Query:  FGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHGFRLFPGFES
        +G NLDYYD NS  LYP++M  FPMPG KPVWH  + F  F S
Subjt:  FGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHGFRLFPGFES
YP_009675519.1 DNA polymerase [Sophora flavescens]2.9e-0581.82Show/hide
Query:  GENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
        GENL YYD NS  LYPYIM SFPMPG KPVWHG
Subjt:  GENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
TrEMBL top hitse value%identityAlignment
A0A101LW89 DNA-directed DNA polymerase2.0e-0473.53Show/hide
Query:  FGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
        +GENL YYD NS  LYPYIM +F MPG KPVWHG
Subjt:  FGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
A0A2I0VCD2 DNA polymerase4.1e-0549.12Show/hide
Query:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHGFRLFPGFESLALWEWSDFSGL
        K +GE+L YYD NS  LYP++M  FPMPG  PVWHG  L+P      L+   +F G+
Subjt:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHGFRLFPGFESLALWEWSDFSGL
A0A3S5HWV8 DNA-directed DNA polymerase1.6e-0469.44Show/hide
Query:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
        K +GENL YYD NS  LYPYIM ++PMPG  PVWHG
Subjt:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
A0A4Y5UYY5 DNA-directed DNA polymerase1.4e-0581.82Show/hide
Query:  GENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
        GENL YYD NS  LYPYIM SFPMPG KPVWHG
Subjt:  GENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
A0A6B9MLS4 DNA polymerase2.0e-0466.67Show/hide
Query:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
        K +GE+L YYD NS  LYP++M  FPMPG KPVWHG
Subjt:  KLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCATGCTGATGTTTATAAAGCTCTTCGGTGAGAATTTAGACTATTACGACGGGAACTCATTATTATTATATCCCTATATCATGATGTCCTTTCCAATGCCTGG
GGTTAAACCTGTTTGGCATGGGTTCAGACTATTCCCCGGATTTGAATCTTTGGCCCTTTGGGAATGGAGTGACTTTTCTGGTTTGTGCAAGTCATTTTGTTTCATGAGTA
CTATTGTGGATACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCCATGCTGATGTTTATAAAGCTCTTCGGTGAGAATTTAGACTATTACGACGGGAACTCATTATTATTATATCCCTATATCATGATGTCCTTTCCAATGCCTGG
GGTTAAACCTGTTTGGCATGGGTTCAGACTATTCCCCGGATTTGAATCTTTGGCCCTTTGGGAATGGAGTGACTTTTCTGGTTTGTGCAAGTCATTTTGTTTCATGAGTA
CTATTGTGGATACATAA
Protein sequenceShow/hide protein sequence
MEAMLMFIKLFGENLDYYDGNSLLLYPYIMMSFPMPGVKPVWHGFRLFPGFESLALWEWSDFSGLCKSFCFMSTIVDT