; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G011140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G011140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCmo_Chr14:7561995..7564293
RNA-Seq ExpressionCmoCh14G011140
SyntenyCmoCh14G011140
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018152.1 Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.9e-10673.94Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------
        +DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC                
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------

Query:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGN+NLINDVMKA
Subjt:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
        IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT

XP_022156960.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Momordica charantia]2.3e-9668.31Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------
        +DGYAHSIMIS FCR GLLEEAK+LAKDFE TYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMD+LAISPDYNTFHILIKYFC                
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------

Query:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                RLLKDAYVVVKDNA LIS+PAIRKFAF+FMK GNVNLINDVMKA
Subjt:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
        IH SGYKIDQDLFMMATSR+IELPEKKDLF+QLLQWM GQGYVVDSSTRNLILKNSHLFGRQLIA+ILSKQH VSKATRSH N+
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT

XP_022930554.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita moschata]1.4e-10674.3Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------
        +DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC                
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------

Query:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
Subjt:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
        IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT

XP_022980545.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita maxima]1.4e-10674.3Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------
        +DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC                
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------

Query:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
Subjt:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
        IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT

XP_023528492.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic [Cucurbita pepo subsp. pepo]6.1e-10573.68Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------
        +DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC                
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------

Query:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
Subjt:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSK-QHRVSKATRSHGNT
        IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSK QHRVSKATRSHGNT
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSK-QHRVSKATRSHGNT

TrEMBL top hitse value%identityAlignment
A0A0A0LCK2 PPR_long domain-containing protein9.8e-9367.01Show/hide
Query:  NEKTNDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYF-------------
        N KT DGYAHSIMISAFCRGGLLEEAK LAKDFE TYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMD+LAISPDYNTFHILIKYF             
Subjt:  NEKTNDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYF-------------

Query:  ---------------------------------------------C--------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLIND
                                                     C              RLLKDAYVVVKDNAG+ISKPAIRKFAF FMKFGNVNLIND
Subjt:  ---------------------------------------------C--------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLIND

Query:  VMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
        VMKAIH SGYKIDQDLFM+ATSR+IELPEKKDLFIQLL+WM GQGYVVDSSTRNLILKN+HLFGRQLIA+ILSK   +SK+T+S   T
Subjt:  VMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT

A0A1S3CMQ2 pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X21.8e-9166.2Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYF-----------------
        +DGYAHSIMISAFCR GLLEEAK LAKDFE TYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMD+LAISPDY TFHILIKYF                 
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYF-----------------

Query:  -----------------------------------------C--------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                 C              RLLKDAYV+VKDN GLISKPAIRKFAF FMKFGNVNLINDVMKA
Subjt:  -----------------------------------------C--------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
        IH SGYKIDQDLFM+ATSR+IELPEKKDLFIQLL WM GQGYVVDSSTRNLILKN+HLFGRQLIA+ILSK   +SK+T+S  NT
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT

A0A6J1DRU4 pentatricopeptide repeat-containing protein At1g10910, chloroplastic1.1e-9668.31Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------
        +DGYAHSIMIS FCR GLLEEAK+LAKDFE TYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMD+LAISPDYNTFHILIKYFC                
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------

Query:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                RLLKDAYVVVKDNA LIS+PAIRKFAF+FMK GNVNLINDVMKA
Subjt:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
        IH SGYKIDQDLFMMATSR+IELPEKKDLF+QLLQWM GQGYVVDSSTRNLILKNSHLFGRQLIA+ILSKQH VSKATRSH N+
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT

A0A6J1ERS3 pentatricopeptide repeat-containing protein At1g10910, chloroplastic7.0e-10774.3Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------
        +DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC                
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------

Query:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
Subjt:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
        IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT

A0A6J1IWQ9 pentatricopeptide repeat-containing protein At1g10910, chloroplastic7.0e-10774.3Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------
        +DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC                
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC----------------

Query:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
Subjt:  --------------------------------------------------------RLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
        IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSKATRSHGNT

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial1.0e-0923.37Show/hide
Query:  YAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC--RLLKDAYVVVKDNAGLI
        + ++ +++  C+ G +EEA +L  +FE      D V   T++ AYC++GEM+   ++L++M    + P   TF++L+  FC   +L+D   ++       
Subjt:  YAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC--RLLKDAYVVVKDNAGLI

Query:  SKPAIRKFAFKFMKF---GNVNLINDVMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILK
          P    F     ++    N+     + K +   G   D   +        +    K+ +  L Q M G+G+ V  ST ++++K
Subjt:  SKPAIRKFAFKFMKF---GNVNLINDVMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILK

Q0WVV0 Pentatricopeptide repeat-containing protein At1g10910, chloroplastic2.3e-7051.09Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR---------------
        +DGYA+SIMISA CR    +EAK+L++D ETTY++ D+V+LNTMLCAYCRAGEMESVM+M++KMDE A+SPDYNTFHILIKYF +               
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR---------------

Query:  ---------------------------------------------------------LLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                 LLKDAY+VVKDNA +IS+P ++KF   FM  GN+NL+NDV+K 
Subjt:  ---------------------------------------------------------LLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSK
        +H SG+KIDQ  F +A SR+I  P+KK+L +QLLQWM GQGYVVDSSTRNLILKNSH+FGR LIA+ILSK H  S+
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSK

Q5G1S8 Pentatricopeptide repeat-containing protein At3g18110, chloroplastic5.5e-0821.86Show/hide
Query:  HSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC--RLLKDAYVVVKDNAGLISK
        + +MI   C+G  + +A+ +  + E    + ++ I N+ML  Y    + +  +Q+ +++ E  + PD  T++ LI  +C  R  ++ Y++++    L   
Subjt:  HSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC--RLLKDAYVVVKDNAGLISK

Query:  PAIRKFAFKFMKFGNVNLI---NDVMKAIHCSGYKIDQDLF--MMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLIL
        P +  +      FG    +     + + +   G K+D+  +  MM  SR      K +   +LLQ M   G     +T +L++
Subjt:  PAIRKFAFKFMKFGNVNLI---NDVMKAIHCSGYKIDQDLF--MMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLIL

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial3.8e-0935.96Show/hide
Query:  DGYAHS-----IMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR
        DG+A S     I+I+  CR G++EEA +  K+        DIV  N+++   CRAG +E  + M RK+    I PD  TF+ L+ + C+
Subjt:  DGYAHS-----IMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial5.5e-0824.17Show/hide
Query:  DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR--LLKDAYVVVKDNAG
        D   +SI+I   C+ G L+ A  L  + E    + DI+  NT++  +C AG  +   ++LR M +  ISP+  TF +LI  F +   L++A  ++K+   
Subjt:  DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR--LLKDAYVVVKDNAG

Query:  LISKPAIRKFAFKFMKFGNVNLINDVMKAIH---CSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADIL
            P    +      F   N + + ++ +      G   D   F +  + + +   + D  ++L + MS +G + ++ T N +++     G+  +A  L
Subjt:  LISKPAIRKFAFKFMKFGNVNLINDVMKAIH---CSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADIL

Query:  SKQHRVSKATR
          Q  VS+  R
Subjt:  SKQHRVSKATR

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein7.1e-1123.37Show/hide
Query:  YAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC--RLLKDAYVVVKDNAGLI
        + ++ +++  C+ G +EEA +L  +FE      D V   T++ AYC++GEM+   ++L++M    + P   TF++L+  FC   +L+D   ++       
Subjt:  YAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC--RLLKDAYVVVKDNAGLI

Query:  SKPAIRKFAFKFMKF---GNVNLINDVMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILK
          P    F     ++    N+     + K +   G   D   +        +    K+ +  L Q M G+G+ V  ST ++++K
Subjt:  SKPAIRKFAFKFMKF---GNVNLINDVMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILK

AT1G05670.2 Pentatricopeptide repeat (PPR-like) superfamily protein7.1e-1123.37Show/hide
Query:  YAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC--RLLKDAYVVVKDNAGLI
        + ++ +++  C+ G +EEA +L  +FE      D V   T++ AYC++GEM+   ++L++M    + P   TF++L+  FC   +L+D   ++       
Subjt:  YAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFC--RLLKDAYVVVKDNAGLI

Query:  SKPAIRKFAFKFMKF---GNVNLINDVMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILK
          P    F     ++    N+     + K +   G   D   +        +    K+ +  L Q M G+G+ V  ST ++++K
Subjt:  SKPAIRKFAFKFMKF---GNVNLINDVMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILK

AT1G10910.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-7151.09Show/hide
Query:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR---------------
        +DGYA+SIMISA CR    +EAK+L++D ETTY++ D+V+LNTMLCAYCRAGEMESVM+M++KMDE A+SPDYNTFHILIKYF +               
Subjt:  NDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR---------------

Query:  ---------------------------------------------------------LLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA
                                                                 LLKDAY+VVKDNA +IS+P ++KF   FM  GN+NL+NDV+K 
Subjt:  ---------------------------------------------------------LLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKA

Query:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSK
        +H SG+KIDQ  F +A SR+I  P+KK+L +QLLQWM GQGYVVDSSTRNLILKNSH+FGR LIA+ILSK H  S+
Subjt:  IHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHRVSK

AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein3.9e-0924.17Show/hide
Query:  DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR--LLKDAYVVVKDNAG
        D   +SI+I   C+ G L+ A  L  + E    + DI+  NT++  +C AG  +   ++LR M +  ISP+  TF +LI  F +   L++A  ++K+   
Subjt:  DGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR--LLKDAYVVVKDNAG

Query:  LISKPAIRKFAFKFMKFGNVNLINDVMKAIH---CSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADIL
            P    +      F   N + + ++ +      G   D   F +  + + +   + D  ++L + MS +G + ++ T N +++     G+  +A  L
Subjt:  LISKPAIRKFAFKFMKFGNVNLINDVMKAIH---CSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILKNSHLFGRQLIADIL

Query:  SKQHRVSKATR
          Q  VS+  R
Subjt:  SKQHRVSKATR

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein2.7e-1035.96Show/hide
Query:  DGYAHS-----IMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR
        DG+A S     I+I+  CR G++EEA +  K+        DIV  N+++   CRAG +E  + M RK+    I PD  TF+ L+ + C+
Subjt:  DGYAHS-----IMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPDYNTFHILIKYFCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAATGCAGAGACGTTGAATGCATGCAACAGGTGCAGAACAGAGGCAACGAATGAAGCAACAGTACTGCAGAGATGCAACAATAGCAAACTAGGCCACAATGAAAA
GACCAACGATGGGTATGCCCACAGCATCATGATATCAGCTTTTTGCCGAGGTGGGCTTCTAGAAGAGGCAAAACAGTTGGCTAAGGATTTTGAAACCACATATGACAGAT
ATGACATTGTAATATTGAATACAATGCTCTGTGCGTACTGCAGAGCAGGAGAAATGGAGAGTGTCATGCAAATGCTTAGGAAAATGGATGAATTAGCAATCAGTCCAGAT
TATAATACCTTTCATATCTTAATCAAATATTTCTGTCGACTTCTCAAAGACGCTTATGTCGTTGTCAAGGACAATGCAGGACTGATTTCTAAACCTGCCATAAGGAAGTT
CGCTTTCAAATTCATGAAGTTCGGTAACGTCAACTTGATAAATGACGTAATGAAGGCAATCCATTGTTCTGGATATAAGATTGATCAGGATTTATTTATGATGGCTACAT
CACGTTTCATTGAGCTGCCTGAAAAGAAGGATTTGTTTATTCAATTGCTACAATGGATGTCTGGTCAGGGTTATGTCGTTGACTCATCAACCAGAAACCTTATCTTAAAG
AACTCACATTTATTTGGTCGCCAGCTTATTGCCGACATTCTGTCAAAGCAGCATCGAGTGTCCAAAGCTACAAGATCTCATGGGAACACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAATGCAGAGACGTTGAATGCATGCAACAGGTGCAGAACAGAGGCAACGAATGAAGCAACAGTACTGCAGAGATGCAACAATAGCAAACTAGGCCACAATGAAAA
GACCAACGATGGGTATGCCCACAGCATCATGATATCAGCTTTTTGCCGAGGTGGGCTTCTAGAAGAGGCAAAACAGTTGGCTAAGGATTTTGAAACCACATATGACAGAT
ATGACATTGTAATATTGAATACAATGCTCTGTGCGTACTGCAGAGCAGGAGAAATGGAGAGTGTCATGCAAATGCTTAGGAAAATGGATGAATTAGCAATCAGTCCAGAT
TATAATACCTTTCATATCTTAATCAAATATTTCTGTCGACTTCTCAAAGACGCTTATGTCGTTGTCAAGGACAATGCAGGACTGATTTCTAAACCTGCCATAAGGAAGTT
CGCTTTCAAATTCATGAAGTTCGGTAACGTCAACTTGATAAATGACGTAATGAAGGCAATCCATTGTTCTGGATATAAGATTGATCAGGATTTATTTATGATGGCTACAT
CACGTTTCATTGAGCTGCCTGAAAAGAAGGATTTGTTTATTCAATTGCTACAATGGATGTCTGGTCAGGGTTATGTCGTTGACTCATCAACCAGAAACCTTATCTTAAAG
AACTCACATTTATTTGGTCGCCAGCTTATTGCCGACATTCTGTCAAAGCAGCATCGAGTGTCCAAAGCTACAAGATCTCATGGGAACACTTGAAGGAGATAATTGATCTT
GTTTTGACATTAGATTTTTGGGTTGGATAGTGTGGAGATCAAAGATAGGGTTGTTTGTTAGTATCACTGGTAAACCCTTACATTTATTCAAATATATGCTGTGTGTATTT
GTGTTATGATGTTGGAGACTGGAGCTTTCTTATTGAAATTTCATGAGTAGATATGTAACGGTCCAAGCTCACTGCTGGCAGATATTGTCATCTTTGGGCTTTTCTTTTCG
GGTTTCTCTTTAAGACTTTAAAACGCGTCTGCTAGGGAGAGGTTTCTACACCCTTATAAATGGTGTTTCGTTCTCTTCCTCAATCGATGTGGGACATTACAGATTAGATC
CCACATGGGTTGGTACAAAACACCGAAGCTTATATCTTTTGGATTCATTTGGTGTTATTGTTTCTATGCTGAGAACTAAAGTCGGTTTGAATTTTTGTGAACTTTCGGGA
GATCTCTAGCCAAACAGGTTGCGAAGCTCCAAGTGTTCGATGAACTTGGCGAGGATCGTTCTCAAATGATGGGGAGGAAAATAGCGCATCAAATCTAAGGCAGGTG
Protein sequenceShow/hide protein sequence
MHNAETLNACNRCRTEATNEATVLQRCNNSKLGHNEKTNDGYAHSIMISAFCRGGLLEEAKQLAKDFETTYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDELAISPD
YNTFHILIKYFCRLLKDAYVVVKDNAGLISKPAIRKFAFKFMKFGNVNLINDVMKAIHCSGYKIDQDLFMMATSRFIELPEKKDLFIQLLQWMSGQGYVVDSSTRNLILK
NSHLFGRQLIADILSKQHRVSKATRSHGNT