CuGenDBv2

Gene ID	CmoCh14G011240
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Tubulin glycylase
Genome location	Cmo_Chr14:7819635..7822613
RNA-Seq Expression	CmoCh14G011240
Synteny	CmoCh14G011240
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581665.1 hypothetical protein SDJN03_21667, partial [Cucurbita argyrosperma subsp. sororia]

6.5e-107

98.96

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Query:  MDLKGNIAPIALIASNFVFFDAFFSWRYGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERT
        MDLKGNIAPIALIASNFVFFDAFFSWRYGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERT
Subjt:  MDLKGNIAPIALIASNFVFFDAFFSWRYGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERT

Query:  VVVERRGHDAARFRSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        VVVERRGHDAARF+SIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  VVVERRGHDAARFRSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

KAG7018156.1 hypothetical protein SDJN02_20024 [Cucurbita argyrosperma subsp. argyrosperma]

9.4e-90

96.45

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Query:  FSWRYGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWE
        F  + GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARF SIVHAHGWE
Subjt:  FSWRYGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWE

Query:  EDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        EDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPG+
Subjt:  EDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

XP_022930568.1 uncharacterized protein LOC111436977 isoform X1 [Cucurbita moschata]

3.2e-90

100

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Query:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
        GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
Subjt:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK

Query:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
Subjt:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

XP_022930569.1 uncharacterized protein LOC111436977 isoform X2 [Cucurbita moschata]

3.2e-90

100

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Query:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
        GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
Subjt:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK

Query:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
Subjt:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

XP_023515562.1 uncharacterized protein LOC111779684 isoform X2 [Cucurbita pepo subsp. pepo]

2.1e-89

99.39

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Query:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
        GGDK RMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
Subjt:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK

Query:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
Subjt:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1ERU0 uncharacterized protein LOC111436977 isoform X2

1.6e-90

100

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Query:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
        GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
Subjt:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK

Query:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
Subjt:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

A0A6J1EVL3 uncharacterized protein LOC111436977 isoform X1

1.6e-90

100

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Query:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
        GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
Subjt:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK

Query:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
Subjt:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

A0A6J1IS39 uncharacterized protein LOC111480016 isoform X2

5.6e-88

97.56

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Query:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
        GGDK RMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNN QERTVVVERRGHDAARF SIVHAHGWEEDVVK
Subjt:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK

Query:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        MVEKKHGKNDIMISFECQTLKSE+AAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
Subjt:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

A0A6J1IUF0 uncharacterized protein LOC111480016 isoform X1

5.6e-88

97.56

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Query:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK
        GGDK RMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNN QERTVVVERRGHDAARF SIVHAHGWEEDVVK
Subjt:  GGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVK

Query:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        MVEKKHGKNDIMISFECQTLKSE+AAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
Subjt:  MVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

A0A6J1J065 uncharacterized protein LOC111480016 isoform X3

9.8e-85

98.1

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Query:  MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVKMVEKKH
        MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNN QERTVVVERRGHDAARF SIVHAHGWEEDVVKMVEKKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVKMVEKKH

Query:  GKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
        GKNDIMISFECQTLKSE+AAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE
Subjt:  GKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G29280.1 unknown protein

2.7e-66

69.81

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Query:  DKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVKMV
        D+E    EGVASIALLPCG++SGHFIQ+P  +CYGLHGTEL CE ECSRGEDYRLIKLTI +YN K+E+TVVVE +GHDAAR   + HAHGWEEDV+ +V
Subjt:  DKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDAARFRSIVHAHGWEEDVVKMV

Query:  EKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQ
        E+KHGK  + +SFEC+TLK+++AAEDHIRQF+PKL G DAV+N+GPM I GLDF A E+
Subjt:  EKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATCTTAAAGGTAACATCGCCCCTATTGCCCTAATTGCTTCTAATTTCGTTTTCTTTGACGCCTTTTTCTCTTGGCGATACGGAGGAGATAAGGAGAGAATGGCGAT
GGAAGGAGTTGCTTCTATTGCACTTTTGCCTTGTGGCTCTGTCTCTGGCCACTTCATTCAACTTCCTCACTTCGTCTGCTATGGCCTACACGGCACCGAATTGGAATGTG
AAAGAGAGTGTAGCAGAGGTGAGGATTACCGCTTGATCAAGCTCACAATTACGAACTACAATAACAAGCAAGAACGAACTGTCGTTGTTGAACGTAGAGGCCATGATGCT
GCACGGTTTCGCAGCATCGTTCATGCTCATGGTTGGGAAGAGGATGTAGTGAAAATGGTTGAAAAAAAGCATGGAAAGAATGACATAATGATTTCGTTCGAGTGTCAAAC
GTTGAAGTCTGAGCAAGCGGCTGAGGATCATATCAGACAGTTTATTCCCAAATTAGTAGGACAAGACGCTGTGGTTAACGTGGGGCCAATGAGCATCAGAGGATTGGATT
TTGAAGCAGAGGAGCAACCAGGAGAGTGA

mRNA sequence

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Protein sequence

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MDLKGNIAPIALIASNFVFFDAFFSWRYGGDKERMAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVERRGHDA
ARFRSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEQAAEDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE

CmoCh14G011240 (gene) of Cucurbita moschata (Rifu) v1 genome