; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G011310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G011310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGibberellin regulated protein
Genome locationCmo_Chr14:7958822..7959972
RNA-Seq ExpressionCmoCh14G011310
SyntenyCmoCh14G011310
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581671.1 Protein GAST1, partial [Cucurbita argyrosperma subsp. sororia]5.2e-5994.87Show/hide
Query:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MARKQILE FFAVVLLNCLLLAQNHSISEAPTPQPHSG     DPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
Subjt:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYNEWKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

XP_022930592.1 protein GAST1-like [Cucurbita moschata]3.7e-65100Show/hide
Query:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
Subjt:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYNEWKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

XP_022980754.1 protein GAST1-like [Cucurbita maxima]5.2e-5991.53Show/hide
Query:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGG-GNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        MARKQ+ E FFAV+L NCLLLAQNHSISEAPTPQP SGG  NYPDPM GV+EGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGG-GNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  SCPCYNEWKTKRGGPKCP
        SCPCYNEWKTKRGGPKCP
Subjt:  SCPCYNEWKTKRGGPKCP

XP_023516497.1 protein GAST1-like [Cucurbita pepo subsp. pepo]1.6e-6093.16Show/hide
Query:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MARKQI+E FFAV+ LNCLLLAQNHSISEAPTPQP SGGGN PDPM GV+EGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
Subjt:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYNEWKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

XP_038903614.1 protein GAST1 [Benincasa hispida]4.9e-4976.92Show/hide
Query:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MARKQ++   F V+LLNC+LL  NH+ISEAPTPQP S G     PM GV+EGSL+P+ECG RC  RC KTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+
Subjt:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYNEWKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LI43 Uncharacterized protein2.7e-4579.81Show/hide
Query:  VLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGG
        +LLNC+LL  N +ISEAPTPQP +   NY +PM GV+EGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+CPCYN+WKTKRGG
Subjt:  VLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGG

Query:  PKCP
        PKCP
Subjt:  PKCP

A0A1S3CMR4 protein GAST1-like5.3e-4977.97Show/hide
Query:  MARKQILE-TFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        M RKQI+E   F V+LLNC+LLA N +ISEAPTPQP +   NY +PM GV+EGSL+P+ECG RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MARKQILE-TFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  SCPCYNEWKTKRGGPKCP
        +CPCYN+WKTKRGGPKCP
Subjt:  SCPCYNEWKTKRGGPKCP

A0A6J1E399 protein GAST12.6e-4877.78Show/hide
Query:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MARKQ +  FF V+ LN +LL QNH+ISEAPTPQP    GN+P PM GV+EGSL+P+ECG RC  RCSKTAFKKPCMFFCQKCCAKCLCVP+GTYGNKQS
Subjt:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYN+WKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

A0A6J1EQZ6 protein GAST1-like1.8e-65100Show/hide
Query:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
Subjt:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYNEWKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

A0A6J1J049 protein GAST1-like2.5e-5991.53Show/hide
Query:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGG-GNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
        MARKQ+ E FFAV+L NCLLLAQNHSISEAPTPQP SGG  NYPDPM GV+EGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ
Subjt:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGG-GNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ

Query:  SCPCYNEWKTKRGGPKCP
        SCPCYNEWKTKRGGPKCP
Subjt:  SCPCYNEWKTKRGGPKCP

SwissProt top hitse value%identityAlignment
A8MR46 Gibberellin-regulated protein 132.3e-2578.33Show/hide
Query:  ECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        ECG RC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WKTK GGPKCP
Subjt:  ECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

P27057 Protein GAST11.3e-3157.26Show/hide
Query:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS
        MA K  +  F  +V    + L QN  +S A   +         + + GVSEG L P++C  +C  RCSKT++KKPCMFFCQKCCAKCLCVP GTYGNKQS
Subjt:  MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQS

Query:  CPCYNEWKTKRGGPKCP
        CPCYN WKTKRGGPKCP
Subjt:  CPCYNEWKTKRGGPKCP

Q6GKX7 Gibberellin-regulated protein 122.7e-2652.73Show/hide
Query:  VVLLNCLLLAQNHS-----ISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEW
        V +++ LL A   S      S+A  P  H  GG          EGSL+PEEC   C  RCS T+ +KPC+FFC KCC KCLCVP GTYG+K+ CPCYN W
Subjt:  VVLLNCLLLAQNHS-----ISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEW

Query:  KTKRGGPKCP
         TK GGPKCP
Subjt:  KTKRGGPKCP

Q6NMQ7 Gibberellin-regulated protein 61.9e-2775.76Show/hide
Query:  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        GSL+  +CGG+C  RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++GGPKCP
Subjt:  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

Q84J95 Gibberellin-regulated protein 52.3e-2569.7Show/hide
Query:  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        G L+P++C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQ+CPCYN WKTK G PKCP
Subjt:  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein1.3e-2875.76Show/hide
Query:  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        GSL+  +CGG+C  RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++GGPKCP
Subjt:  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

AT2G30810.1 Gibberellin-regulated family protein1.9e-2752.73Show/hide
Query:  VVLLNCLLLAQNHS-----ISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEW
        V +++ LL A   S      S+A  P  H  GG          EGSL+PEEC   C  RCS T+ +KPC+FFC KCC KCLCVP GTYG+K+ CPCYN W
Subjt:  VVLLNCLLLAQNHS-----ISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEW

Query:  KTKRGGPKCP
         TK GGPKCP
Subjt:  KTKRGGPKCP

AT3G02885.1 GAST1 protein homolog 51.6e-2669.7Show/hide
Query:  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        G L+P++C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQ+CPCYN WKTK G PKCP
Subjt:  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

AT3G10185.1 Gibberellin-regulated family protein1.6e-2678.33Show/hide
Query:  ECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
        ECG RC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WKTK GGPKCP
Subjt:  ECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

AT5G15230.1 GAST1 protein homolog 43.2e-2244.55Show/hide
Query:  ETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEW
        +++ A+ LL  ++L    ++  A      S G N     +    GSL+  +C   C  RC KT + K C+ FC KCC KCLCVP G YGNKQ C CYN W
Subjt:  ETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEW

Query:  KTKRGGPKCP
        KT+ GGPKCP
Subjt:  KTKRGGPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGAAGCAAATACTGGAGACGTTTTTTGCAGTTGTGTTGCTCAATTGCCTTTTGTTAGCACAAAACCATAGCATCAGCGAGGCTCCAACTCCACAGCCCCATAG
CGGGGGCGGCAACTATCCGGATCCCATGCGTGGAGTGAGTGAAGGCAGCCTGGAACCTGAAGAGTGTGGAGGTCGATGCGCGGGGAGATGCTCAAAGACGGCGTTCAAGA
AGCCATGCATGTTCTTCTGCCAGAAATGCTGTGCCAAATGCTTGTGTGTGCCGTATGGGACTTATGGAAACAAGCAGTCTTGTCCATGCTACAATGAATGGAAGACTAAA
AGAGGAGGCCCCAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
GCGTTTTAAAAACTTTGAGGAAAAACTCGAAAGGAAAGATCCACAAAAAACAATATCTATCCGACCCATTTGGTGCATTCCCATGCACAACACAAACTATGATCTTTTAA
TCCTTTTAAGAGTGTGTCTATATACATATATATATATATATATTGTACACTCAATGAACCATCGATAAAATCTCTCTCTCTCTCCTTCTCCTTCCCTCTCTCCCTCTCTC
TCTCTCTTTAGTGTAGCTAGTTATAGCAGTTTGGCATGGCGAGGAAGCAAATACTGGAGACGTTTTTTGCAGTTGTGTTGCTCAATTGCCTTTTGTTAGCACAAAACCAT
AGCATCAGCGAGGCTCCAACTCCACAGCCCCATAGCGGGGGCGGCAACTATCCGGATCCCATGCGTGGAGTGAGTGAAGGCAGCCTGGAACCTGAAGAGTGTGGAGGTCG
ATGCGCGGGGAGATGCTCAAAGACGGCGTTCAAGAAGCCATGCATGTTCTTCTGCCAGAAATGCTGTGCCAAATGCTTGTGTGTGCCGTATGGGACTTATGGAAACAAGC
AGTCTTGTCCATGCTACAATGAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTGAATAATTAAACTACCATTATACTATTACTTCGCTCTAAATTACAGTTTTATA
ATTTACCTCTAATTTTATGAATCTTTACTGTCCTTCTACTTATAACCTATTTCTTCTTACTTAGCACTCTAATTAATTACTTTGAACAACCCATTAAAGGGGACCTGGCT
TTCATAACGTGGTCGTGGTCCTTATACATGCA
Protein sequenceShow/hide protein sequence
MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTK
RGGPKCP