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CmoCh14G011390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G011390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box protein At5g39250-like
Genome locationCmo_Chr14:8102531..8102878
RNA-Seq ExpressionCmoCh14G011390
SyntenyCmoCh14G011390
Gene Ontology termsNA
InterPro domainsIPR044207 - F-box protein At5g39250-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581678.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5697.39Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        M LAVEPGFSISIFDTMSVSVLVRCKNSNK TQVVNKSVFDYFDKMS RAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDEVLWLFDLLNWN
        TKDEVLWLFDLLNWN
Subjt:  TKDEVLWLFDLLNWN
KAG6592901.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]4.7e-3671.05Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        MTL V+P FSI I  T+SVSVLV  K+SNKV ++VNKSVFDY D+ S R   FDYLDFS LYP VSGIRAW+SLLFLD+  NDG++DV GIVMDFCD A 
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDEVLWLFDLLNW
        TKDEVLWL DLL+W
Subjt:  TKDEVLWLFDLLNW
KAG7018165.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-4997.12Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        M LAVEPGFSISIFDTMSVSVLVRCKNSNK TQVVNKSVFDYFDKMS RAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDE
        TKDE
Subjt:  TKDE
XP_022930578.1 F-box protein At5g39250-like [Cucurbita moschata]5.1e-59100Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDEVLWLFDLLNWN
        TKDEVLWLFDLLNWN
Subjt:  TKDEVLWLFDLLNWN
XP_022979540.1 F-box protein At5g39250-like [Cucurbita maxima]7.4e-5090.43Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        MTLAVEPGFSISI DTMSVSVLVRCKNSNKV  +VNKS+FDYFDKMS RAFCFDYLDFSHLYP VSGIRAWVSLLFLD NENDGVVDVNGIVMDFCDVAK
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDEVLWLFDLLNWN
        TKDEVL L  LLNWN
Subjt:  TKDEVLWLFDLLNWN
TrEMBL top hitse value%identityAlignment
A0A1S3BL55 F-box protein At5g392503.3e-3569.3Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        MTL VEP FSI I + +S SVLV  K+SNKV ++VNKSVFDY D+ S RA  FDYLDFS L+P VSGIRAW+SLLF+D+  NDG +DV GIVMDFCD A 
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDEVLWLFDLLNW
        TKDEVLWL DLL+W
Subjt:  TKDEVLWLFDLLNW
A0A6J1EVM4 F-box protein At5g39250-like2.5e-59100Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDEVLWLFDLLNWN
        TKDEVLWLFDLLNWN
Subjt:  TKDEVLWLFDLLNWN
A0A6J1H6B9 F-box protein At5g392502.3e-3671.05Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        MTL V+P FSI I  T+SVSVLV  K+SNKV ++VNKSVFDY D+ S R   FDYLDFS LYP VSGIRAW+SLLFLD+  NDG++DV GIVMDFCD A 
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDEVLWLFDLLNW
        TKDEVLWL DLL+W
Subjt:  TKDEVLWLFDLLNW
A0A6J1ITK0 F-box protein At5g39250-like3.6e-5090.43Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        MTLAVEPGFSISI DTMSVSVLVRCKNSNKV  +VNKS+FDYFDKMS RAFCFDYLDFSHLYP VSGIRAWVSLLFLD NENDGVVDVNGIVMDFCDVAK
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDEVLWLFDLLNWN
        TKDEVL L  LLNWN
Subjt:  TKDEVLWLFDLLNWN
A0A6J1KTX3 F-box protein At5g39250-like2.3e-3671.05Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK
        MTL V+P FSI I  T+SVSVLV  K+SNKV ++VNKSVFDY D+ S R   FDYLDFS LYP VSGIRAW+SLLFLD+  NDG++DV GIVMDFCD A 
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAK

Query:  TKDEVLWLFDLLNW
        TKDEVLWL DLL+W
Subjt:  TKDEVLWLFDLLNW
SwissProt top hitse value%identityAlignment
Q9FL82 F-box protein At5g392501.2e-2954.31Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLD--NNENDGVVDVNGIVMDFCDV
        M +  EP F+I +  ++SVSVLV   +S+KV +++N+SVFDY D+ S RA  F+YLD S  YP +SGIRAW+SLLF+D  +  +DG++DV GI +DF DV
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLD--NNENDGVVDVNGIVMDFCDV

Query:  AKTKDEVLWLFDLLNW
        A TK+EVLWL D+L+W
Subjt:  AKTKDEVLWLFDLLNW
Arabidopsis top hitse value%identityAlignment
AT5G39250.1 F-box family protein8.3e-3154.31Show/hide
Query:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLD--NNENDGVVDVNGIVMDFCDV
        M +  EP F+I +  ++SVSVLV   +S+KV +++N+SVFDY D+ S RA  F+YLD S  YP +SGIRAW+SLLF+D  +  +DG++DV GI +DF DV
Subjt:  MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLD--NNENDGVVDVNGIVMDFCDV

Query:  AKTKDEVLWLFDLLNW
        A TK+EVLWL D+L+W
Subjt:  AKTKDEVLWLFDLLNW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTAGCAGTTGAGCCAGGATTCTCAATTTCTATATTTGATACCATGAGTGTATCCGTGCTCGTGAGATGCAAGAATTCCAACAAAGTTACTCAAGTAGTCAATAA
ATCTGTATTTGATTATTTCGATAAAATGTCAGGTAGGGCATTTTGTTTTGACTATCTTGATTTCTCACATCTCTACCCTCTTGTCTCTGGAATTCGAGCATGGGTCTCAT
TGCTTTTCTTGGACAACAATGAAAATGACGGTGTAGTTGATGTTAATGGGATAGTAATGGATTTTTGTGATGTTGCAAAGACAAAAGATGAGGTATTATGGCTTTTCGAC
TTGCTCAATTGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTAGCAGTTGAGCCAGGATTCTCAATTTCTATATTTGATACCATGAGTGTATCCGTGCTCGTGAGATGCAAGAATTCCAACAAAGTTACTCAAGTAGTCAATAA
ATCTGTATTTGATTATTTCGATAAAATGTCAGGTAGGGCATTTTGTTTTGACTATCTTGATTTCTCACATCTCTACCCTCTTGTCTCTGGAATTCGAGCATGGGTCTCAT
TGCTTTTCTTGGACAACAATGAAAATGACGGTGTAGTTGATGTTAATGGGATAGTAATGGATTTTTGTGATGTTGCAAAGACAAAAGATGAGGTATTATGGCTTTTCGAC
TTGCTCAATTGGAATTGA
Protein sequenceShow/hide protein sequence
MTLAVEPGFSISIFDTMSVSVLVRCKNSNKVTQVVNKSVFDYFDKMSGRAFCFDYLDFSHLYPLVSGIRAWVSLLFLDNNENDGVVDVNGIVMDFCDVAKTKDEVLWLFD
LLNWN