| GenBank top hits | e value | %identity | Alignment |
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| KAA0037542.1 gag/pol protein [Cucumis melo var. makuwa] | 6.8e-72 | 53.55 | Show/hide |
Query: ISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVLMN
+SDVLAKKH+ + TTKEIM++L+ M+GQP +SLRH+ IKYIY RMKEG+SVREHVLDM++HFN+ E N +VI+E +Q +F LP + + L
Subjt: ISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVLMN
Query: KIEYNLTALLNALQAYQSLLTNKGQTGEANVAISKKLLRGSSSKNNFSSTAHFRCNGNILNILKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKS
K + + A+ G A + + + + S + + NILKYLRRT+ Y+L+Y KDLI+ GYTD DFQTD +RKS
Subjt: KIEYNLTALLNALQAYQSLLTNKGQTGEANVAISKKLLRGSSSKNNFSSTAHFRCNGNILNILKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKS
Query: TSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSHK
TSGS+ TLNGGAI+WRS+K+ CI DSTME EYVAACE AK+ +WLRKFLTDLE+V NMHL +TLYCDN+GAVA+S+EPRSHK
Subjt: TSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSHK
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| KAA0041899.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 8.9e-72 | 45.14 | Show/hide |
Query: KANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVH--------------FNVVEEN----
K+ +ARVYIL+S+SDVLAKKH+ + T KEIM+SLKGMF QP +SLRHE IKYIY RMKEG+SVREHVLDMM+H N +E+N
Subjt: KANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVH--------------FNVVEEN----
Query: -EAVIDEK---SQVSFIMMSLPKSFFQ--FRTNVLMNKIEYNLTALLNALQAYQSLLTN-----------------------------KGQTGEANVAIS
++ ++EK ++S + +P + MN ++ + L+ +S+ +N K QT +A + +
Subjt: -EAVIDEK---SQVSFIMMSLPKSFFQ--FRTNVLMNKIEYNLTALLNALQAYQSLLTN-----------------------------KGQTGEANVAIS
Query: KK----------------LLRGSSSKN---------NFSSTAHF--------------------RCNGN--------ILNILKYLRRTRDYMLMYGAKDL
K + +G KN +ST F R N + NILKYLRRT+DYML+YG+KDL
Subjt: KK----------------LLRGSSSKN---------NFSSTAHF--------------------RCNGN--------ILNILKYLRRTRDYMLMYGAKDL
Query: IVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSH
I+ GYTDSDFQTD +RKSTSGS+FTLNGGA+IWRSIKQ CIA+STMEAEYVA CE AKE VWL+KF TDLEVV NMHLP+TLYCDNSGAVA+S+EPRSH
Subjt: IVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSH
Query: K
K
Subjt: K
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| KAA0043025.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-75 | 47.58 | Show/hide |
Query: RWIKANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMM
+WIK N+K RVYIL+S+SDVL +KH+ + K+IM+SLK MFGQP +SLRHE IKYIY MKEG+SVRE VLDMM+HFN+ + N IDE +QV+FI+
Subjt: RWIKANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMM
Query: SLPKSFFQFRTNVLMNKIEYNLTALLNALQAYQSLLTNKGQTGEANVAISK-KLLRGSSSKNNFSSTAHFR-------------CNGNILNIL-------
SL KSF F+TN +NKIE+NLT LLN LQ +Q+L KG+ EANVA +K K RGSSSK + R GN L
Subjt: SLPKSFFQFRTNVLMNKIEYNLTALLNALQAYQSLLTNKGQTGEANVAISK-KLLRGSSSKNNFSSTAHFR-------------CNGNILNIL-------
Query: -----KYLRRTRDYMLMYG---------------------------------AKDLIVIGYTDSDFQTDVG---------------SRKSTSGSVFTLNG
+ + D+ L+ AK + + ++D +V SRKSTSGSVFTLNG
Subjt: -----KYLRRTRDYMLMYG---------------------------------AKDLIVIGYTDSDFQTDVG---------------SRKSTSGSVFTLNG
Query: GAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSHK
G ++WRSIKQ CIADSTMEAEYV ACE AKE VWL+KFLTDLEV+ NMHL +TLYCDN+GAV +S++PR+HK
Subjt: GAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSHK
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| TYK05842.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-71 | 37.12 | Show/hide |
Query: SISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVLM
S+SDVLAKKH+ + TTKEIM+SLKGMFGQP +SLRHE IKYIY RMKEG+S+REHVLD M+HFNV E N VI+E +QV FI+ S PKSF F+TN +
Subjt: SISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVLM
Query: NKIEYNLTALLNALQAYQSLLTNKGQTGEANVAISK-KLLRGSSSK------------------------------------------------------
NKIE+NLT LLN LQ +Q+L K + EANVA +K K R SSSK
Subjt: NKIEYNLTALLNALQAYQSLLTNKGQTGEANVAISK-KLLRGSSSK------------------------------------------------------
Query: -----------------------------------------------------------NNF--------------------------------------
NN
Subjt: -----------------------------------------------------------NNF--------------------------------------
Query: ----------------------------------SSTAHFRC-----------------------------NGNIL----------------------NI
SS+ +C NI NI
Subjt: ----------------------------------SSTAHFRC-----------------------------NGNIL----------------------NI
Query: LKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPV
LKYLRRT+ YML+YG+KDLI+ GYTDSDFQ+D +RKSTSGSVFTLNGGA++W SIK+ CIADSTM+ EYV CE E VWL+KFLT+LE+V NMHLP+
Subjt: LKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPV
Query: TLYCDNSGAVAHSKEPRSHK
TLYCDNSG VA+S+EPRSHK
Subjt: TLYCDNSGAVAHSKEPRSHK
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| TYK21841.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-68 | 36.88 | Show/hide |
Query: RWIKANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMM
RW KANDKARVYIL+S+SD+L+KKH++M T +IM+SL+ MFGQ S ++ + IKY+YN MKEG SVR+HV+DM+VHFNV E N V DEKSQ+SFI+
Subjt: RWIKANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMM
Query: SLPKSFFQFRTNVLMNKIEYNLTALLNALQAYQSLLTNKGQ-TGEAN---------VAISKKLLR-----------------------------------
SLPKSF QF +N MNKI YN+T L L +QSL KGQ GEAN VAI +K R
Subjt: SLPKSFFQFRTNVLMNKIEYNLTALLNALQAYQSLLTNKGQ-TGEAN---------VAISKKLLR-----------------------------------
Query: ----------------------------------------------------------GSSSK---NNFSSTAH--------------------------
G SS+ N SS +H
Subjt: ----------------------------------------------------------GSSSK---NNFSSTAH--------------------------
Query: ------------------------------------------------------------------------------------------FRCNGNILN-
++ N + +
Subjt: ------------------------------------------------------------------------------------------FRCNGNILN-
Query: -----ILKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVS
ILKYL+RTR YML+YGAKDLI+ GYTDSDFQTD S+K TSGS+FTLNGG ++WRSI QG I DSTMEAEYV A E AKE V+LRKFL DLEVV
Subjt: -----ILKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVS
Query: NMHLPVTLYCDNSGAVAHSKEPRSHK
NM+L +TLYCDN+ VA+SKE RSHK
Subjt: NMHLPVTLYCDNSGAVAHSKEPRSHK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TKJ0 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 4.3e-72 | 45.14 | Show/hide |
Query: KANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVH--------------FNVVEEN----
K+ +ARVYIL+S+SDVLAKKH+ + T KEIM+SLKGMF QP +SLRHE IKYIY RMKEG+SVREHVLDMM+H N +E+N
Subjt: KANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVH--------------FNVVEEN----
Query: -EAVIDEK---SQVSFIMMSLPKSFFQ--FRTNVLMNKIEYNLTALLNALQAYQSLLTN-----------------------------KGQTGEANVAIS
++ ++EK ++S + +P + MN ++ + L+ +S+ +N K QT +A + +
Subjt: -EAVIDEK---SQVSFIMMSLPKSFFQ--FRTNVLMNKIEYNLTALLNALQAYQSLLTN-----------------------------KGQTGEANVAIS
Query: KK----------------LLRGSSSKN---------NFSSTAHF--------------------RCNGN--------ILNILKYLRRTRDYMLMYGAKDL
K + +G KN +ST F R N + NILKYLRRT+DYML+YG+KDL
Subjt: KK----------------LLRGSSSKN---------NFSSTAHF--------------------RCNGN--------ILNILKYLRRTRDYMLMYGAKDL
Query: IVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSH
I+ GYTDSDFQTD +RKSTSGS+FTLNGGA+IWRSIKQ CIA+STMEAEYVA CE AKE VWL+KF TDLEVV NMHLP+TLYCDNSGAVA+S+EPRSH
Subjt: IVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSH
Query: K
K
Subjt: K
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| A0A5A7TNN0 Gag/pol protein | 8.4e-76 | 47.58 | Show/hide |
Query: RWIKANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMM
+WIK N+K RVYIL+S+SDVL +KH+ + K+IM+SLK MFGQP +SLRHE IKYIY MKEG+SVRE VLDMM+HFN+ + N IDE +QV+FI+
Subjt: RWIKANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMM
Query: SLPKSFFQFRTNVLMNKIEYNLTALLNALQAYQSLLTNKGQTGEANVAISK-KLLRGSSSKNNFSSTAHFR-------------CNGNILNIL-------
SL KSF F+TN +NKIE+NLT LLN LQ +Q+L KG+ EANVA +K K RGSSSK + R GN L
Subjt: SLPKSFFQFRTNVLMNKIEYNLTALLNALQAYQSLLTNKGQTGEANVAISK-KLLRGSSSKNNFSSTAHFR-------------CNGNILNIL-------
Query: -----KYLRRTRDYMLMYG---------------------------------AKDLIVIGYTDSDFQTDVG---------------SRKSTSGSVFTLNG
+ + D+ L+ AK + + ++D +V SRKSTSGSVFTLNG
Subjt: -----KYLRRTRDYMLMYG---------------------------------AKDLIVIGYTDSDFQTDVG---------------SRKSTSGSVFTLNG
Query: GAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSHK
G ++WRSIKQ CIADSTMEAEYV ACE AKE VWL+KFLTDLEV+ NMHL +TLYCDN+GAV +S++PR+HK
Subjt: GAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSHK
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| A0A5D3BRI6 Gag/pol protein | 3.3e-72 | 53.55 | Show/hide |
Query: ISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVLMN
+SDVLAKKH+ + TTKEIM++L+ M+GQP +SLRH+ IKYIY RMKEG+SVREHVLDM++HFN+ E N +VI+E +Q +F LP + + L
Subjt: ISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVLMN
Query: KIEYNLTALLNALQAYQSLLTNKGQTGEANVAISKKLLRGSSSKNNFSSTAHFRCNGNILNILKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKS
K + + A+ G A + + + + S + + NILKYLRRT+ Y+L+Y KDLI+ GYTD DFQTD +RKS
Subjt: KIEYNLTALLNALQAYQSLLTNKGQTGEANVAISKKLLRGSSSKNNFSSTAHFRCNGNILNILKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKS
Query: TSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSHK
TSGS+ TLNGGAI+WRS+K+ CI DSTME EYVAACE AK+ +WLRKFLTDLE+V NMHL +TLYCDN+GAVA+S+EPRSHK
Subjt: TSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPVTLYCDNSGAVAHSKEPRSHK
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| A0A5D3C3P6 Gag/pol protein | 4.8e-71 | 37.12 | Show/hide |
Query: SISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVLM
S+SDVLAKKH+ + TTKEIM+SLKGMFGQP +SLRHE IKYIY RMKEG+S+REHVLD M+HFNV E N VI+E +QV FI+ S PKSF F+TN +
Subjt: SISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVLM
Query: NKIEYNLTALLNALQAYQSLLTNKGQTGEANVAISK-KLLRGSSSK------------------------------------------------------
NKIE+NLT LLN LQ +Q+L K + EANVA +K K R SSSK
Subjt: NKIEYNLTALLNALQAYQSLLTNKGQTGEANVAISK-KLLRGSSSK------------------------------------------------------
Query: -----------------------------------------------------------NNF--------------------------------------
NN
Subjt: -----------------------------------------------------------NNF--------------------------------------
Query: ----------------------------------SSTAHFRC-----------------------------NGNIL----------------------NI
SS+ +C NI NI
Subjt: ----------------------------------SSTAHFRC-----------------------------NGNIL----------------------NI
Query: LKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPV
LKYLRRT+ YML+YG+KDLI+ GYTDSDFQ+D +RKSTSGSVFTLNGGA++W SIK+ CIADSTM+ EYV CE E VWL+KFLT+LE+V NMHLP+
Subjt: LKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVSNMHLPV
Query: TLYCDNSGAVAHSKEPRSHK
TLYCDNSG VA+S+EPRSHK
Subjt: TLYCDNSGAVAHSKEPRSHK
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| A0A5D3DDU7 Gag/pol protein | 5.9e-69 | 36.88 | Show/hide |
Query: RWIKANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMM
RW KANDKARVYIL+S+SD+L+KKH++M T +IM+SL+ MFGQ S ++ + IKY+YN MKEG SVR+HV+DM+VHFNV E N V DEKSQ+SFI+
Subjt: RWIKANDKARVYILSSISDVLAKKHDVMGTTKEIMESLKGMFGQPSFSLRHEVIKYIYNCRMKEGSSVREHVLDMMVHFNVVEENEAVIDEKSQVSFIMM
Query: SLPKSFFQFRTNVLMNKIEYNLTALLNALQAYQSLLTNKGQ-TGEAN---------VAISKKLLR-----------------------------------
SLPKSF QF +N MNKI YN+T L L +QSL KGQ GEAN VAI +K R
Subjt: SLPKSFFQFRTNVLMNKIEYNLTALLNALQAYQSLLTNKGQ-TGEAN---------VAISKKLLR-----------------------------------
Query: ----------------------------------------------------------GSSSK---NNFSSTAH--------------------------
G SS+ N SS +H
Subjt: ----------------------------------------------------------GSSSK---NNFSSTAH--------------------------
Query: ------------------------------------------------------------------------------------------FRCNGNILN-
++ N + +
Subjt: ------------------------------------------------------------------------------------------FRCNGNILN-
Query: -----ILKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVS
ILKYL+RTR YML+YGAKDLI+ GYTDSDFQTD S+K TSGS+FTLNGG ++WRSI QG I DSTMEAEYV A E AKE V+LRKFL DLEVV
Subjt: -----ILKYLRRTRDYMLMYGAKDLIVIGYTDSDFQTDVGSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEEAKEFVWLRKFLTDLEVVS
Query: NMHLPVTLYCDNSGAVAHSKEPRSHK
NM+L +TLYCDN+ VA+SKE RSHK
Subjt: NMHLPVTLYCDNSGAVAHSKEPRSHK
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