CuGenDBv2

Gene ID	CmoCh14G011580
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Genome location	Cmo_Chr14:9128448..9128768
RNA-Seq Expression	CmoCh14G011580
Synteny	CmoCh14G011580
Gene Ontology terms	GO:0009536 - plastid (cellular component) GO:0016020 - membrane (cellular component) GO:0005488 - binding (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domains	IPR004497 - NADH-plastoquinone oxidoreductase, subunit I IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

Homology

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GenBank top hits

e value

%identity

Alignment

QBX03152.1 NADH dehydrogenase subunit I [Pelargonium caylae]

6.3e-32

68.22

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

QVD45893.1 NADH-plastoquinone oxidoreductase subunit I [Primula densa]

3.7e-32

68.22

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFE DIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

YP_009536945.1 NADH-plastoquinone oxidoreductase subunit I [Clematis acerifolia]

6.3e-32

68.22

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

YP_009935320.1 NADH-plastoquinone oxidoreductase subunit I [Edgeworthia chrysantha]

6.3e-32

68.22

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

YP_009973541.1 NADH-plastoquinone oxidoreductase subunit I [Oxalis corniculata]

6.3e-32

67.29

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ T+ V+RYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

TrEMBL top hits

e value

%identity

Alignment

A0A1B0PTR6 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

3.0e-32

68.22

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

A0A1L4BMU0 NADH-quinone oxidoreductase subunit I

3.0e-32

68.22

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

A0A3P8MVU5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

3.0e-32

68.22

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

A0A7G9XIT8 NADH dehydrogenase subunit I

3.0e-32

68.22

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

A0A7G9XJC2 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

3.0e-32

68.22

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

SwissProt top hits

e value

%identity

Alignment

A0ZZ89 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

3.1e-34

67.29

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYG  TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

Q09FQ6 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

4.1e-34

67.29

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWK ETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

Q09MC2 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

1.1e-34

67.29

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ T+  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

Q2L959 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

3.1e-34

67.29

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYG  TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWKFETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

Q2QD37 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

4.1e-34

67.29

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        MFPMVTGFMNYGQ TV  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWK ETDIRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

Arabidopsis top hits

e value

%identity

Alignment

AT1G16700.1 Alpha-helical ferredoxin

4.5e-04

36.07

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Query:  RFRG-----RIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSIDFEICIFC
        RFRG     R     ++CIAC++C  VCP     ++ + E +   RR   Y ID   CI+C
Subjt:  RFRG-----RIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSIDFEICIFC

AT1G79010.1 Alpha-helical ferredoxin

4.5e-04

36.07

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Query:  RFRG-----RIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSIDFEICIFC
        RFRG     R     ++CIAC++C  VCP     ++ + E +   RR   Y ID   CI+C
Subjt:  RFRG-----RIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSIDFEICIFC

ATCG01090.1 NADPH dehydrogenases

1.6e-33

63.55

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Query:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID
        M PM+TGFMNYGQ T+  ARYI                            ERFRGRIHFEFDKCIACEVCV VCPIDLPVVDWK ET+IRK+RLLNYSID
Subjt:  MFPMVTGFMNYGQHTVLVARYI----------------------------ERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSID

Query:  FEICIFC
        F ICIFC
Subjt:  FEICIFC

Sequences

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CDS sequence

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ATGTTCCCTATGGTAACTGGGTTCATGAATTATGGTCAACATACAGTACTAGTTGCAAGGTACATTGAGCGTTTTCGCGGTCGAATCCATTTTGAATTTGATAAATGCAT
TGCTTGTGAAGTATGTGTTCATGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTTGAAACGGATATTCGAAAGAGACGATTGCTTAATTACAGTATTGATTTCG
AGATCTGTATATTTTGT

mRNA sequence

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Protein sequence

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MFPMVTGFMNYGQHTVLVARYIERFRGRIHFEFDKCIACEVCVHVCPIDLPVVDWKFETDIRKRRLLNYSIDFEICIFC

CmoCh14G011580 (gene) of Cucurbita moschata (Rifu) v1 genome