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CmoCh14G011950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G011950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationCmo_Chr14:10085602..10085886
RNA-Seq ExpressionCmoCh14G011950
SyntenyCmoCh14G011950
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064159.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]6.5e-2869.89Show/hide
Query:  LCL---LVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        LCL   ++A V +V L+TGA +A+AV C+P EMR CLPA++SS PPTAECC+K+K+QE C CEYLKSPI K YLESPNAKKIASSCG+PIPTC
Subjt:  LCL---LVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

KAB2611859.1 non-specific lipid-transfer protein 2-like [Pyrus ussuriensis x Pyrus communis]4.5e-2156.18Show/hide
Query:  CLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        CL+VA+V  V L   A   EAV C P+E+  CL AI+S  PP+A CC+K+K+Q+ C CEY+K+P+LKPY+++PNAKK+AS+CGVP P C
Subjt:  CLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

KAG6581740.1 hypothetical protein SDJN03_21742, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4294.68Show/hide
Query:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        MKKRLCL+VAV+ MV LLTG GVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
Subjt:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

KGN53815.1 hypothetical protein Csa_014873 [Cucumis sativus]3.5e-2972.04Show/hide
Query:  LCLLVAVVAMVV---LLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        LCL V V+AMV+   L+TGAG+A+AV C+PMEMR CLPA++SS PPTAECC+K+K+QE C C YLKSP+ KPYLESPNAKKIA+SC VPIPTC
Subjt:  LCLLVAVVAMVV---LLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

XP_023527041.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]1.5e-4091.49Show/hide
Query:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        MKKRL LLVAV+AMV LLTGAGVAEAV CDP EMRACLPA+KS+EPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCG+PIPTC
Subjt:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

TrEMBL top hitse value%identityAlignment
A0A0A0KW09 AAI domain-containing protein1.7e-2972.04Show/hide
Query:  LCLLVAVVAMVV---LLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        LCL V V+AMV+   L+TGAG+A+AV C+PMEMR CLPA++SS PPTAECC+K+K+QE C C YLKSP+ KPYLESPNAKKIA+SC VPIPTC
Subjt:  LCLLVAVVAMVV---LLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

A0A4S4CYQ9 AAI domain-containing protein4.9e-2155.21Show/hide
Query:  MKKR--LCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        MKKR  + ++V V+ M VLL  A VAEAV C P+E+  C+ AI SS+PP+  CCDKV++Q  CLC YLK P L+ Y+ SPN++++AS+CGVP PTC
Subjt:  MKKR--LCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

A0A5A7VF50 Non-specific lipid-transfer protein 2-like3.2e-2869.89Show/hide
Query:  LCL---LVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        LCL   ++A V +V L+TGA +A+AV C+P EMR CLPA++SS PPTAECC+K+K+QE C CEYLKSPI K YLESPNAKKIASSCG+PIPTC
Subjt:  LCL---LVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

A0A5N5G8U2 Non-specific lipid-transfer protein 2-like2.2e-2156.18Show/hide
Query:  CLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        CL+VA+V  V L   A   EAV C P+E+  CL AI+S  PP+A CC+K+K+Q+ C CEY+K+P+LKPY+++PNAKK+AS+CGVP P C
Subjt:  CLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

A0A6A4L2T0 AAI domain-containing protein (Fragment)1.1e-2054.17Show/hide
Query:  MKKRLC--LLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        MKK  C  LL A+V +VV+L  A V EAV C+P+E+R CL A  S +PP+A CCDKV++Q+ CLC Y+K+P LK ++ SPN +K+ ++CGVP PTC
Subjt:  MKKRLC--LLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 23.3e-1442.11Show/hide
Query:  MKKRLCLLVAVVAMVVLLTGAGVAEA-VKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        M +RL +LV  VAMV    G  V  A   C+  ++  C  AI     PTA CC  ++ Q+GC C++ K P    Y+ SPNA+K  SSCG+ +PTC
Subjt:  MKKRLCLLVAVVAMVVLLTGAGVAEA-VKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

P20145 Probable non-specific lipid-transfer protein3.3e-1436.17Show/hide
Query:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        M+K   + V +V +V L  GA       C+P ++  C  AI     P+ ECC  ++ Q+GCLC+Y+K P    Y+ SP+A+   + CG+P+P C
Subjt:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

P82353 Non-specific lipid-transfer protein 27.8e-1650Show/hide
Query:  VKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        V C P+++  CL  I S  P    CC K+++Q  CLC YLK+P L+ Y+ SPNA+K+AS+CGVP+P C
Subjt:  VKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

Q10ST8 Non-specific lipid-transfer protein 21.2e-1341.05Show/hide
Query:  MKKRLCLLVAVVAMVVLLTGAGVAEA-VKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        M ++L +LV  VAMV    G  V  A   C+  ++  C  AI     PTA CC  ++ Q+GC C++ K P    Y+ SPNA+K  SSCG+ +PTC
Subjt:  MKKRLCLLVAVVAMVVLLTGAGVAEA-VKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

Q43681 Probable non-specific lipid-transfer protein AKCS91.5e-1948.42Show/hide
Query:  MKKRLCLLVAVVAMVVLLTGAG-VAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        MK ++ ++ AVV + + L   G VAEAV C+P E+ +C+PAI     P++ CC K+K QE CLC Y+K+P LK Y+ SP AKK+ S+CGV  P C
Subjt:  MKKRLCLLVAVVAMVVLLTGAG-VAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

Arabidopsis top hitse value%identityAlignment
AT1G07747.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.8e-1538.3Show/hide
Query:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        MK +   LV V  ++  +      E   C   +++ACLP I    PP+ +CC K+K ++ C CEYLK+P++ PY+ S  AK++  +CGVP+P C
Subjt:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.5e-1942.55Show/hide
Query:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        M K + + V  +A  +LL    VAE V C PM++ +C  A+ SS PP+  CC K+++Q+ CLC Y+++P L+ Y+ SPNA+K+++SC +P P+C
Subjt:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

AT2G14846.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.4e-1442.86Show/hide
Query:  EAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        E V C   ++R CLPA+++   P+ +CC K+K+Q  CLC YLK P    Y+ S  A+K+ ++C +PIP C
Subjt:  EAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.9e-1844.68Show/hide
Query:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        M K   + +  +A V+L+  A  AEAV C PM++  C  AI SS PP+A CC K+K+Q  CLC Y+++P L+ ++ +PNA+K++ SC +PIP C
Subjt:  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.4e-1436.36Show/hide
Query:  LLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC
        +L  V     ++ G+G    V CD  ++ +C+ A+ +  PP+ +CC K+K+ E CLC Y+++P+   Y+ SPNA+K  ++C V  PTC
Subjt:  LLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGGTGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATG
TCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTT
ATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGGTGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATG
TCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTT
ATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG
Protein sequenceShow/hide protein sequence
MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC