CuGenDBv2

Gene ID	CmoCh14G012100
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	mediator of RNA polymerase II transcription subunit 8 isoform X1
Genome location	Cmo_Chr14:10307797..10321343
RNA-Seq Expression	CmoCh14G012100
Synteny	CmoCh14G012100
Gene Ontology terms	GO:0016592 - mediator complex (cellular component)
InterPro domains	IPR038795 - Mediator of RNA polymerase II transcription subunit 8, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581760.1 Mediator of RNA polymerase II transcription subunit 8, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-280

92.83

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Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT----QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQ
        SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT    QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQ
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT----QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQ

Query:  QQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRV
        QQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRV
Subjt:  QQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRV

Query:  QYGSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        QYGSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Subjt:  QYGSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

XP_022956012.1 mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita moschata]

2.4e-282

93.47

Show/hide

Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR
        SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR

Query:  QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS
        QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS
Subjt:  QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS

Query:  NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Subjt:  NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

XP_022956013.1 mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucurbita moschata]

2.3e-280

93.3

Show/hide

Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR
        SHNIGGPGSLL QPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR

Query:  QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS
        QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS
Subjt:  QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS

Query:  NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Subjt:  NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

XP_022980584.1 mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita maxima]

1.2e-276

92.12

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Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MATMDGVVQNQPQQQQPLLAPQ VVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEV+DNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT--QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQ
        SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTT PLPYANSPRSTANVMNIPSPQQQT  QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQ
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT--QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQ

Query:  MRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY
        MRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY
Subjt:  MRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY

Query:  GSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        GSNPQRSHAQILSDQMFNMGGGSAGGMMPM  QQQQQQQQQLAPQGAFGNM+TNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Subjt:  GSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

XP_023526991.1 mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita pepo subsp. pepo]

2.4e-277

91.53

Show/hide

Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MATMDGV QNQPQQQQPLLAPQ VVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT--------QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQ
        SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMN+PSPQQQT        QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQ
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT--------QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQ

Query:  LLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPL
        LLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPL
Subjt:  LLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPL

Query:  MPRVQYGSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        MPRVQYGSNPQRSHAQILSDQMFNMGGGSAGGMMPM QQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Subjt:  MPRVQYGSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPL4 mediator of RNA polymerase II transcription subunit 8 isoform X1

8.6e-241

82.34

Show/hide

Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MAT+DG VQNQPQQQQPL A Q V AERLNQAVQQQLNLEA+K RATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKR+QLLLGM NMP+STQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAI PTLDKAQAAKIQEQENLLRAAVNFGEGLRLP +QRQIT TLPMHL+DVLN GDGVQSFNETSGMYAK+TPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSG---ATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQ
        S NI   G+++QQPPGSQLVGRSAASPSG   ATSFDN+TSP+PYANSPRS+AN+MN PSPQQQTQQQQQQQ QQ QQ      +KLM LPQHQQLLAQQ
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSG---ATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQ

Query:  QMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQ
        QMRQS MQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGH+QHGITQSQLGQGNQMNRHL QFSGAANSSLFN AQTTP+SQMIPNISATMSSQPLM R+Q
Subjt:  QMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQ

Query:  Y---GSNPQRSHA-QILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        +   G+N QR+HA QILSDQMF MGGGS GGMMPM QQQQQQQQ QLA QGAFGNM  NAQSLQSGM+PLQNMQQTHPNFGQQRQQNQQ
Subjt:  Y---GSNPQRSHA-QILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

A0A6J1GV67 mediator of RNA polymerase II transcription subunit 8 isoform X1

1.2e-282

93.47

Show/hide

Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR
        SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR

Query:  QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS
        QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS
Subjt:  QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS

Query:  NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Subjt:  NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

A0A6J1GVL6 mediator of RNA polymerase II transcription subunit 8 isoform X2

1.1e-280

93.3

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Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR
        SHNIGGPGSLL QPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMR

Query:  QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS
        QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS
Subjt:  QSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGS

Query:  NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Subjt:  NPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

A0A6J1IWU9 mediator of RNA polymerase II transcription subunit 8 isoform X2

5.3e-275

91.95

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Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MATMDGVVQNQPQQQQPLLAPQ VVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEV+DNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT--QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQ
        SHNIGGPGSLL QPPGSQLVGRSAASPSGATSFDNTT PLPYANSPRSTANVMNIPSPQQQT  QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQ
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT--QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQ

Query:  MRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY
        MRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY
Subjt:  MRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY

Query:  GSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        GSNPQRSHAQILSDQMFNMGGGSAGGMMPM  QQQQQQQQQLAPQGAFGNM+TNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Subjt:  GSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

A0A6J1IZN9 mediator of RNA polymerase II transcription subunit 8 isoform X1

5.7e-277

92.12

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Query:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV
        MATMDGVVQNQPQQQQPLLAPQ VVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKW                            
Subjt:  MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNV

Query:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
                  QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEV+DNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG
Subjt:  ENRCVISAGEQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIG

Query:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
        AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT
Subjt:  AACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLT

Query:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT--QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQ
        SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTT PLPYANSPRSTANVMNIPSPQQQT  QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQ
Subjt:  SHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQT--QQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQ

Query:  MRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY
        MRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY
Subjt:  MRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY

Query:  GSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
        GSNPQRSHAQILSDQMFNMGGGSAGGMMPM  QQQQQQQQQLAPQGAFGNM+TNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Subjt:  GSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

SwissProt top hits

e value

%identity

Alignment

Q4V3C1 Mediator of RNA polymerase II transcription subunit 8

7.9e-143

56.97

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Query:  QQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNVENRCVISAGEQDI
        + QP   P   VAE+LN  ++++LNLE++KTRA +L KAI+RILEDFD YGRTNTTPKW                                      QDI
Subjt:  QQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNVENRCVISAGEQDI

Query:  LGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAET
        LGQYSMVNLELFNIV+E+K+VS AFVV PKNVNA N+ ILPVMLSSKLLPEME DDN+KR+QLL G+Q++PI  QIE+LK R++MI AACE+AE++LA+T
Subjt:  LGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAET

Query:  RKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQ
        RKAY FG RQGP++ PT+DK QAAKIQEQE +LR AVN G+G +LP DQRQIT  LP HL DVL + D        +G  A   P  S+NI   G  + Q
Subjt:  RKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQ

Query:  PPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQH--QQLLA--QQQMRQSPMQGIGQ
          G+Q VGRSAASPSG  +FDNTTSPLPY+NSPR+T  ++N+PSPQ Q QQQQ QQQ        QQR KLMQLPQH  QQLLA  QQQ+RQS MQG+GQ
Subjt:  PPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQH--QQLLA--QQQMRQSPMQGIGQ

Query:  -------------------IHGQHQMQFSQPL-AHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSS
                            HGQHQM +SQP+ AHQQFQ RQ+S GHIQH ++Q QL     MNRHL+QFSG ANS+LF +AQ +PSSQMIPN+S +M S
Subjt:  -------------------IHGQHQMQFSQPL-AHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSS

Query:  QPLMPRVQY----GSNPQRSH-AQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPN
        Q L+PR+Q     G+NPQRSH +Q+L DQMFN  G        +QQ QQQQQQQQ   QG +GNM TN QSLQ   + +QN QQ H N
Subjt:  QPLMPRVQY----GSNPQRSH-AQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPN

Arabidopsis top hits

e value

%identity

Alignment

AT2G03070.1 mediator subunit 8

5.6e-144

56.97

Show/hide

Query:  QQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNVENRCVISAGEQDI
        + QP   P   VAE+LN  ++++LNLE++KTRA +L KAI+RILEDFD YGRTNTTPKW                                      QDI
Subjt:  QQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNVENRCVISAGEQDI

Query:  LGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAET
        LGQYSMVNLELFNIV+E+K+VS AFVV PKNVNA N+ ILPVMLSSKLLPEME DDN+KR+QLL G+Q++PI  QIE+LK R++MI AACE+AE++LA+T
Subjt:  LGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAET

Query:  RKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQ
        RKAY FG RQGP++ PT+DK QAAKIQEQE +LR AVN G+G +LP DQRQIT  LP HL DVL + D        +G  A   P  S+NI   G  + Q
Subjt:  RKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQ

Query:  PPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQH--QQLLA--QQQMRQSPMQGIGQ
          G+Q VGRSAASPSG  +FDNTTSPLPY+NSPR+T  ++N+PSPQ Q QQQQ QQQ        QQR KLMQLPQH  QQLLA  QQQ+RQS MQG+GQ
Subjt:  PPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQH--QQLLA--QQQMRQSPMQGIGQ

Query:  -------------------IHGQHQMQFSQPL-AHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSS
                            HGQHQM +SQP+ AHQQFQ RQ+S GHIQH ++Q QL     MNRHL+QFSG ANS+LF +AQ +PSSQMIPN+S +M S
Subjt:  -------------------IHGQHQMQFSQPL-AHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSS

Query:  QPLMPRVQY----GSNPQRSH-AQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPN
        Q L+PR+Q     G+NPQRSH +Q+L DQMFN  G        +QQ QQQQQQQQ   QG +GNM TN QSLQ   + +QN QQ H N
Subjt:  QPLMPRVQY----GSNPQRSH-AQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPN

Sequences

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CDS sequence

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ATGGCGACCATGGATGGAGTGGTGCAGAATCAGCCTCAGCAGCAACAGCCTCTCCTGGCGCCGCAGGCGGTTGTCGCAGAAAGGCTAAACCAGGCGGTACAGCAACAGTT
GAACCTGGAGGCTGTGAAGACTCGAGCTACTACTCTATTTAAAGCCATCTCTCGGATCCTCGAAGATTTTGATGTCTACGGTCGCACCAATACGACACCTAAATGGTCCA
CTTTCATCTTTCGCATCGTTTTTTCTTTTCCTGATTGGCTTTCGATTGATAAAGAACTGAAGTTATGTTGTTTGAACGTTGAGAATCGTTGTGTTATTTCTGCCGGGGAG
CAAGACATATTGGGGCAATATTCTATGGTGAATCTCGAGCTTTTCAACATCGTTGACGAAATTAAGAAAGTTTCCAAGGCTTTTGTTGTACATCCTAAGAATGTTAATGC
AGAGAATTCTACAATACTACCAGTTATGTTGTCCTCAAAACTATTGCCTGAGATGGAGGTAGACGATAATTCAAAACGTGACCAGTTGTTACTTGGGATGCAAAATATGC
CAATATCTACACAGATTGAGAAGTTAAAGACTAGAATTGAAATGATTGGAGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAGACTCGGAAAGCATATTGTTTCGGA
ATGCGTCAAGGGCCAGCAATAGCTCCAACTTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAGAATTTACTCCGAGCTGCTGTTAACTTTGGGGAAGGATTAAG
ATTACCTATTGATCAACGGCAGATTACTCCAACACTTCCGATGCATTTAGTAGATGTGCTGAATGTAGGTGATGGAGTGCAGAGTTTTAATGAAACATCTGGTATGTATG
CAAAGAATACTCCTCTAACATCACATAATATTGGTGGTCCAGGATCATTGTTACAGCAGCCTCCTGGGTCACAACTTGTTGGAAGGTCAGCTGCATCGCCTTCTGGTGCC
ACATCCTTTGACAACACAACGTCACCTTTGCCATATGCCAACTCTCCAAGGTCAACTGCGAATGTTATGAACATACCTTCTCCTCAACAGCAGACCCAACAGCAGCAACA
GCAACAGCAACAGCAGCAGCAGCAACTTCAGGTCCAGCAAAGGCAAAAATTGATGCAACTACCTCAGCATCAGCAACTCCTTGCTCAACAACAGATGAGGCAATCTCCTA
TGCAAGGAATAGGACAGATTCATGGACAGCATCAGATGCAGTTTTCACAGCCATTGGCACACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGTCACATTCAACATGGC
ATTACTCAAAGCCAGCTTGGCCAAGGAAATCAAATGAATCGTCACTTGAGCCAGTTTTCTGGTGCTGCTAACAGTAGTTTGTTTAATGCTGCGCAGACTACCCCAAGTTC
TCAAATGATTCCAAATATTTCAGCTACAATGTCATCGCAACCACTCATGCCACGTGTGCAGTATGGGAGCAATCCGCAGCGAAGCCATGCTCAAATTCTGAGTGATCAGA
TGTTCAACATGGGAGGAGGCAGCGCGGGTGGTATGATGCCTATGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCTTGCCCCACAAGGTGCATTTGGTAACATGGCA
ACAAACGCACAGTCTCTCCAATCTGGTATGCTACCACTCCAGAACATGCAACAGACTCACCCTAATTTCGGCCAGCAAAGACAGCAAAACCAGCAATAA

mRNA sequence

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Protein sequence

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MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWSTFIFRIVFSFPDWLSIDKELKLCCLNVENRCVISAGE
QDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYCFG
MRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGA
TSFDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHG
ITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMA
TNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ

CmoCh14G012100 (gene) of Cucurbita moschata (Rifu) v1 genome