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CmoCh14G012340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G012340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCmo_Chr14:10464566..10464919
RNA-Seq ExpressionCmoCh14G012340
SyntenyCmoCh14G012340
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581780.1 Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5699.15Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE
        MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVS+AALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE

Query:  NADTQLGSADELVQFYT
        NADTQLGSADELVQFYT
Subjt:  NADTQLGSADELVQFYT

XP_011651720.1 auxin-responsive protein SAUR78 [Cucumis sativus]1.2e-4784Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTT---SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLF
        MAKLGKLTKLKSAIKRWPSISKLSR TT   SSAVS+A LD D     H+LHPVFVGRSRRRYLLSSDVV HPLFQE+VDKSSPNS+E+G+V+SCEVVLF
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTT---SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLF

Query:  EHLLWMLENADTQLGSADELVQFYT
        EHLLWMLENA TQLGSADELVQFYT
Subjt:  EHLLWMLENADTQLGSADELVQFYT

XP_016902534.1 PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo]9.3e-4885.83Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTT----SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEE-GVVVSCEVV
        MAKLGKLTKLKSAIKRWPSISKLSRT T    SSAVSSA LD D     H+LHPVFVGRSRRRYLLSSDVV HPLFQE+VDKSSPNS+EE G+VVSCEVV
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTT----SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEE-GVVVSCEVV

Query:  LFEHLLWMLENADTQLGSADELVQFYT
        LFEHLLWMLENADTQLGSADELVQFYT
Subjt:  LFEHLLWMLENADTQLGSADELVQFYT

XP_022955880.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]8.4e-57100Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE
        MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE

Query:  NADTQLGSADELVQFYT
        NADTQLGSADELVQFYT
Subjt:  NADTQLGSADELVQFYT

XP_022980757.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]5.4e-5698.29Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE
        MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVV+KSSPNSDE+GVVVSCEVVLFEHLLWMLE
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE

Query:  NADTQLGSADELVQFYT
        NADTQLGSADELVQFYT
Subjt:  NADTQLGSADELVQFYT

TrEMBL top hitse value%identityAlignment
A0A0A0LBZ7 Uncharacterized protein5.9e-4884Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTT---SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLF
        MAKLGKLTKLKSAIKRWPSISKLSR TT   SSAVS+A LD D     H+LHPVFVGRSRRRYLLSSDVV HPLFQE+VDKSSPNS+E+G+V+SCEVVLF
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTT---SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLF

Query:  EHLLWMLENADTQLGSADELVQFYT
        EHLLWMLENA TQLGSADELVQFYT
Subjt:  EHLLWMLENADTQLGSADELVQFYT

A0A1S4E2S4 auxin-responsive protein SAUR71-like4.5e-4885.83Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTT----SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEE-GVVVSCEVV
        MAKLGKLTKLKSAIKRWPSISKLSRT T    SSAVSSA LD D     H+LHPVFVGRSRRRYLLSSDVV HPLFQE+VDKSSPNS+EE G+VVSCEVV
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTT----SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEE-GVVVSCEVV

Query:  LFEHLLWMLENADTQLGSADELVQFYT
        LFEHLLWMLENADTQLGSADELVQFYT
Subjt:  LFEHLLWMLENADTQLGSADELVQFYT

A0A5D3D6I8 Auxin-responsive protein SAUR71-like4.5e-4885.83Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTT----SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEE-GVVVSCEVV
        MAKLGKLTKLKSAIKRWPSISKLSRT T    SSAVSSA LD D     H+LHPVFVGRSRRRYLLSSDVV HPLFQE+VDKSSPNS+EE G+VVSCEVV
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTT----SSAVSSAALDED-----HNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEE-GVVVSCEVV

Query:  LFEHLLWMLENADTQLGSADELVQFYT
        LFEHLLWMLENADTQLGSADELVQFYT
Subjt:  LFEHLLWMLENADTQLGSADELVQFYT

A0A6J1GWA8 auxin-responsive protein SAUR50-like4.0e-57100Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE
        MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE

Query:  NADTQLGSADELVQFYT
        NADTQLGSADELVQFYT
Subjt:  NADTQLGSADELVQFYT

A0A6J1IS54 auxin-responsive protein SAUR50-like2.6e-5698.29Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE
        MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVV+KSSPNSDE+GVVVSCEVVLFEHLLWMLE
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLE

Query:  NADTQLGSADELVQFYT
        NADTQLGSADELVQFYT
Subjt:  NADTQLGSADELVQFYT

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR767.9e-1848Show/hide
Query:  MAKLG-KLTKLKSAIKRWPSI----SKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEG-VVVSCEVVLFEH
        MAK G KL KLKS +K+  S     ++    T  S  S+ +     +L  V+VGR+RR Y +SSDVV HPLFQ++         E+G + VSCEVVLFEH
Subjt:  MAKLG-KLTKLKSAIKRWPSI----SKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEG-VVVSCEVVLFEH

Query:  LLWMLENAD---TQLGSADELVQFY
        LLWMLENAD   ++  S  ELV+FY
Subjt:  LLWMLENAD---TQLGSADELVQFY

Q9C9E1 Auxin-responsive protein SAUR789.7e-3258.82Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEG--VVVSCEVVLFEHLLWM
        MAK+GKLTKLKSA+K+WPS +K    +TSSA  S  L ED+NLH V+VG++RR Y+L  D++ HPLFQE+VD+SS  S E+   +VV+CEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEG--VVVSCEVVLFEHLLWM

Query:  LENADTQLGSADELVQFYT
        L++   + GS +EL +FYT
Subjt:  LENADTQLGSADELVQFYT

Q9LQI6 Auxin-responsive protein SAUR772.2e-2854.55Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISK---LSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSS----PNSDEEGVVVSCEVVLFE
        MA  GKLTKLKSAIK+WPS++K    +  T S+AVS  +  ED  LH V+VG+SRR Y+LSS V+ HPLFQE++D+SS       D+E V+V+CEVVLFE
Subjt:  MAKLGKLTKLKSAIKRWPSISK---LSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSS----PNSDEEGVVVSCEVVLFE

Query:  HLLWMLENA--------DTQLGSADELVQFYT
        HLLWML+N+        D + GS +EL +FYT
Subjt:  HLLWMLENA--------DTQLGSADELVQFYT

Arabidopsis top hitse value%identityAlignment
AT1G16510.1 SAUR-like auxin-responsive protein family1.8e-0428.92Show/hide
Query:  PVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSD--EEGVV-VSCEVVLFEHLLWM-----------LENADTQLGSADELV
        PV+VG    R+++S++++ HP+F  ++++S+      ++GV+ + C V++FE ++             LEN    L S DEL+
Subjt:  PVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSD--EEGVV-VSCEVVLFEHLLWM-----------LENADTQLGSADELV

AT1G17345.1 SAUR-like auxin-responsive protein family1.6e-2954.55Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISK---LSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSS----PNSDEEGVVVSCEVVLFE
        MA  GKLTKLKSAIK+WPS++K    +  T S+AVS  +  ED  LH V+VG+SRR Y+LSS V+ HPLFQE++D+SS       D+E V+V+CEVVLFE
Subjt:  MAKLGKLTKLKSAIKRWPSISK---LSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSS----PNSDEEGVVVSCEVVLFE

Query:  HLLWMLENA--------DTQLGSADELVQFYT
        HLLWML+N+        D + GS +EL +FYT
Subjt:  HLLWMLENA--------DTQLGSADELVQFYT

AT1G72430.1 SAUR-like auxin-responsive protein family6.9e-3358.82Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEG--VVVSCEVVLFEHLLWM
        MAK+GKLTKLKSA+K+WPS +K    +TSSA  S  L ED+NLH V+VG++RR Y+L  D++ HPLFQE+VD+SS  S E+   +VV+CEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEG--VVVSCEVVLFEHLLWM

Query:  LENADTQLGSADELVQFYT
        L++   + GS +EL +FYT
Subjt:  LENADTQLGSADELVQFYT

AT3G12955.1 SAUR-like auxin-responsive protein family2.4e-0932.09Show/hide
Query:  KLTKLKSAIKRWPSIS-KLSRTTTSSAVSSAALDEDHNLH--------------PVFVGRSRRRYLLSSDVVQHPLFQEVVDKS---SPNSDEEG---VV
        K  +L   ++R  S+S +L R+ + +++ S +   D   H               V VGR+++ YL+S   ++HPL   +V+K      + +E+G   + 
Subjt:  KLTKLKSAIKRWPSIS-KLSRTTTSSAVSSAALDEDHNLH--------------PVFVGRSRRRYLLSSDVVQHPLFQEVVDKS---SPNSDEEG---VV

Query:  VSCEVVLFEHLLWMLENADTQ--LGSADELVQFY
        V CEVVLF+HLLWMLE  D    L S D+    Y
Subjt:  VSCEVVLFEHLLWMLENADTQ--LGSADELVQFY

AT5G20820.1 SAUR-like auxin-responsive protein family5.6e-1948Show/hide
Query:  MAKLG-KLTKLKSAIKRWPSI----SKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEG-VVVSCEVVLFEH
        MAK G KL KLKS +K+  S     ++    T  S  S+ +     +L  V+VGR+RR Y +SSDVV HPLFQ++         E+G + VSCEVVLFEH
Subjt:  MAKLG-KLTKLKSAIKRWPSI----SKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEG-VVVSCEVVLFEH

Query:  LLWMLENAD---TQLGSADELVQFY
        LLWMLENAD   ++  S  ELV+FY
Subjt:  LLWMLENAD---TQLGSADELVQFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGCTCGGCAAGCTCACCAAGCTCAAATCCGCCATCAAACGCTGGCCATCCATCTCAAAACTCTCCCGCACCACCACCTCCTCTGCCGTCTCCTCCGCCGCCCT
CGACGAAGACCACAATCTCCACCCAGTCTTCGTGGGCAGGTCCCGTCGCCGCTACCTCCTCTCCTCGGACGTTGTCCAGCACCCACTCTTCCAGGAGGTGGTGGACAAAT
CTTCCCCCAATTCCGATGAAGAGGGTGTTGTTGTGTCGTGCGAGGTTGTCCTGTTCGAGCACTTGCTGTGGATGCTGGAAAATGCAGACACCCAATTGGGGTCCGCCGAT
GAACTTGTCCAATTCTACACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGCTCGGCAAGCTCACCAAGCTCAAATCCGCCATCAAACGCTGGCCATCCATCTCAAAACTCTCCCGCACCACCACCTCCTCTGCCGTCTCCTCCGCCGCCCT
CGACGAAGACCACAATCTCCACCCAGTCTTCGTGGGCAGGTCCCGTCGCCGCTACCTCCTCTCCTCGGACGTTGTCCAGCACCCACTCTTCCAGGAGGTGGTGGACAAAT
CTTCCCCCAATTCCGATGAAGAGGGTGTTGTTGTGTCGTGCGAGGTTGTCCTGTTCGAGCACTTGCTGTGGATGCTGGAAAATGCAGACACCCAATTGGGGTCCGCCGAT
GAACTTGTCCAATTCTACACTTAG
Protein sequenceShow/hide protein sequence
MAKLGKLTKLKSAIKRWPSISKLSRTTTSSAVSSAALDEDHNLHPVFVGRSRRRYLLSSDVVQHPLFQEVVDKSSPNSDEEGVVVSCEVVLFEHLLWMLENADTQLGSAD
ELVQFYT