; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G012360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G012360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein SA
Genome locationCmo_Chr14:10470389..10472230
RNA-Seq ExpressionCmoCh14G012360
SyntenyCmoCh14G012360
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581782.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]3.1e-17599.35Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEG+LGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG
        VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAE G
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG

Query:  APPAASWF
        APPAASWF
Subjt:  APPAASWF

XP_008460336.2 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]3.1e-15991.91Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT T PRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG +WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVA-SSDGWQAAVPPPAPSAEV
        VDLFFYREPEEAKEKEEEEA+A P DYGIAD+G APLV SDQWAGQISDAQWGAPD++P PDAA+V PPVSNVEW+QEPVA +SDGW AAVPPPAP+AE 
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVA-SSDGWQAAVPPPAPSAEV

Query:  GAPPAASWF
        GA PAASWF
Subjt:  GAPPAASWF

XP_022956143.1 40S ribosomal protein SA-like [Cucurbita moschata]2.1e-176100Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG
        VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG

Query:  APPAASWF
        APPAASWF
Subjt:  APPAASWF

XP_022980675.1 40S ribosomal protein SA-like [Cucurbita maxima]8.9e-17599.03Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATPPRQLSQKEADIQMMLA+EVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG
        VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPS E G
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG

Query:  APPAASWF
        APPAASWF
Subjt:  APPAASWF

XP_023527013.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo]1.4e-17599.68Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG
        VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAE G
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG

Query:  APPAASWF
        APPAASWF
Subjt:  APPAASWF

TrEMBL top hitse value%identityAlignment
A0A0A0L946 40S ribosomal protein SA6.3e-15891.32Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATAT PRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG +WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAA-LVPPPVSNVEWSQEPVA--SSDGWQAAVPPPAPSA
        VDLFFYREPEEAKEKEEEEA+A P DYGIAD+G APLV SDQWAGQISDAQWGAPD++P PDAA +V PPVSNVEW+QEPV   +SDGW AA PPPAPSA
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAA-LVPPPVSNVEWSQEPVA--SSDGWQAAVPPPAPSA

Query:  EVGAPPAASWF
        E GA PAASWF
Subjt:  EVGAPPAASWF

A0A1S3CDH5 40S ribosomal protein SA1.5e-15991.91Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT T PRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG +WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVA-SSDGWQAAVPPPAPSAEV
        VDLFFYREPEEAKEKEEEEA+A P DYGIAD+G APLV SDQWAGQISDAQWGAPD++P PDAA+V PPVSNVEW+QEPVA +SDGW AAVPPPAP+AE 
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVA-SSDGWQAAVPPPAPSAEV

Query:  GAPPAASWF
        GA PAASWF
Subjt:  GAPPAASWF

A0A6J1GCP6 40S ribosomal protein SA1.6e-15891.88Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT T PRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVA-SSDGWQAAVPPPAPSAEV
        VDLFFYREPEEAKEKEEE    AP DYGIAD+GAAPLV SDQWAGQISDAQWG PDVVPPP AA V PPV +VEW+QEPVA +SDGW  AVPPPAPSAE 
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVA-SSDGWQAAVPPPAPSAEV

Query:  GAPPAASW
         APPAASW
Subjt:  GAPPAASW

A0A6J1GVZ0 40S ribosomal protein SA1.0e-176100Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG
        VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG

Query:  APPAASWF
        APPAASWF
Subjt:  APPAASWF

A0A6J1IX68 40S ribosomal protein SA4.3e-17599.03Show/hide
Query:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATPPRQLSQKEADIQMMLA+EVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVM

Query:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG
        VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPS E G
Subjt:  VDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVG

Query:  APPAASWF
        APPAASWF
Subjt:  APPAASWF

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA3.6e-12675.94Show/hide
Query:  ATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        ATP R LSQKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAG
Subjt:  ATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  G KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDL

Query:  FFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPL--VTSDQWAGQISDA-QWGA--PDVVPPP--------DAALVPPPVSNVEWSQEPVASSDGWQAAV
        FFYREPEE KE+E +E +AAP DYGI D+ A  L  +    W   I+DA QWGA  P V P P        DAA +P  V        P+A +DGW AA 
Subjt:  FFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPL--VTSDQWAGQISDA-QWGA--PDVVPPP--------DAALVPPPVSNVEWSQEPVASSDGWQAAV

Query:  PPPA---PSAEVGAPPAASW
         PP    P    G PP A W
Subjt:  PPPA---PSAEVGAPPAASW

O22518 40S ribosomal protein SA5.3e-13078.1Show/hide
Query:  ATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
        A A PPRQLSQKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
Subjt:  ATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR GLKWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMV

Query:  DLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEW---SQEPVASSDGWQAAVPPPAPSAE
        DLFFYREPEEAK++EEEEA A  +DY I DF A  +    QW G I D  W   D VP P      P V  V W   ++ P A+   W  AVPPP    +
Subjt:  DLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEW---SQEPVASSDGWQAAVPPPAPSAE

Query:  VGAPPA
        +  PP+
Subjt:  VGAPPA

O65751 40S ribosomal protein SA6.1e-12676.45Show/hide
Query:  MATAT-PPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT T P RQL+QKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTW+KL LAAR+IV IEN QDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATAT-PPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR GLKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDV

Query:  MVDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPP--APSA
        MVDLFFYREPEEAK+ EE+E +AAP DY IADF  + + +  QW   I D  W   D VP P      P V  V W+  P A +  W  AVPPP   P+A
Subjt:  MVDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPP--APSA

Query:  EVGAPPAASW
         + + PA  W
Subjt:  EVGAPPAASW

O80377 40S ribosomal protein SA3.7e-12374.75Show/hide
Query:  ATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        A+  R+LS  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL LAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
Subjt:  ATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  G KW+VMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDL

Query:  FFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSA-EVGAP
        FFYREPEE K++EEE+    P+   +AD+ AAP+  +DQW   I DAQWG  DVV P ++A     V    W+     + DGW AA  PP P A  +  P
Subjt:  FFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSA-EVGAP

Query:  PAASW
            W
Subjt:  PAASW

Q08682 40S ribosomal protein Sa-19.4e-11973.09Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDLFFYRE

Query:  PEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQW-AGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSD-GWQAAVPPPAPSAEVGAPPAAS
        PEE K ++E+EA     +YG        +V  DQW   QI DA W      P    A +    +   WS    A +D GW+AA PP          PAA 
Subjt:  PEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQW-AGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSD-GWQAAVPPPAPSAEVGAPPAAS

Query:  W
        W
Subjt:  W

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA6.7e-12073.09Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDLFFYRE

Query:  PEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQW-AGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSD-GWQAAVPPPAPSAEVGAPPAAS
        PEE K ++E+EA     +YG        +V  DQW   QI DA W      P    A +    +   WS    A +D GW+AA PP          PAA 
Subjt:  PEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQW-AGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSD-GWQAAVPPPAPSAEVGAPPAAS

Query:  W
        W
Subjt:  W

AT1G72370.2 40s ribosomal protein SA5.7e-11972.67Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDLFFYRE

Query:  PEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQW-AGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVGAPPAASW
        PEE K ++E+EA     +YG        +V  DQW   QI DA W      P    A +    +   WS    ++  GW+AA PP          PAA W
Subjt:  PEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQW-AGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVGAPPAASW

AT3G04770.1 40s ribosomal protein SA B4.4e-10388.94Show/hide
Query:  ATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        AT  RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIV IENP+DIIVQSARPYGQRAVLKFAQYTG +AIAG
Subjt:  ATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVD
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVD

AT3G04770.2 40s ribosomal protein SA B2.6e-11674.66Show/hide
Query:  ATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        AT  RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIV IENP+DIIVQSARPYGQRAVLKFAQYTG +AIAG
Subjt:  ATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDL
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDL

Query:  FFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQW-AGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPA
        FFYREPEEAK++ +EEA     DYG        +V  DQW   QISDA W   +V  P  AA   P V         V  + GW+AA  P A
Subjt:  FFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTSDQW-AGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGCAACACCACCACGTCAACTCTCCCAGAAGGAGGCCGATATCCAGATGATGTTGGCTGCCGAGGTTCATCTAGGCACTAAGAATTGCAACTTCCAAATGGA
GCGTTACGTTTTCAAGCGTCGGAACGATGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTCATTGTGGGTATTGAGAATCCAC
AAGATATCATTGTTCAGTCTGCAAGACCTTATGGTCAGAGGGCTGTCTTAAAGTTCGCTCAATACACTGGTGCTCATGCAATAGCCGGGAGGCACACCCCTGGAACCTTC
ACCAACCAGCTTCAGACCTCATTCAATGAGCCGCGTCTTCTCATTCTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCCCTTGGAAACATTCCTACAAT
TGCCTTTTGTGACACTGATTCACCAATGCGTTATGTTGATATTGGAATTCCAGCAAATAACAAGGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCCAGGATGG
TCCTGCAGATGCGTGGAACAATCCGTGCCGGGCTTAAATGGGATGTGATGGTGGATTTGTTTTTCTACCGTGAGCCCGAGGAGGCCAAGGAGAAAGAGGAAGAAGAGGCT
ATTGCTGCGCCCCTAGATTATGGCATTGCAGATTTTGGTGCTGCTCCGCTCGTTACCTCAGATCAATGGGCTGGACAAATTTCTGATGCTCAATGGGGTGCCCCTGATGT
GGTTCCCCCACCAGATGCTGCTTTAGTTCCTCCACCGGTTTCAAATGTCGAGTGGTCCCAAGAGCCAGTTGCTTCATCAGACGGATGGCAAGCTGCAGTACCACCACCAG
CACCTTCAGCTGAAGTTGGCGCCCCTCCAGCTGCCAGTTGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
TATTCTTGCTTTCTTCTATCTTTCTTACCCTCCCGACCCTTCTGTTGCTCCTTCTTTCTCGGTTCATCACAACGATCCGGACATGGCGACTGCAACACCACCACGTCAAC
TCTCCCAGAAGGAGGCCGATATCCAGATGATGTTGGCTGCCGAGGTTCATCTAGGCACTAAGAATTGCAACTTCCAAATGGAGCGTTACGTTTTCAAGCGTCGGAACGAT
GGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTCATTGTGGGTATTGAGAATCCACAAGATATCATTGTTCAGTCTGCAAGACC
TTATGGTCAGAGGGCTGTCTTAAAGTTCGCTCAATACACTGGTGCTCATGCAATAGCCGGGAGGCACACCCCTGGAACCTTCACCAACCAGCTTCAGACCTCATTCAATG
AGCCGCGTCTTCTCATTCTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCCCTTGGAAACATTCCTACAATTGCCTTTTGTGACACTGATTCACCAATG
CGTTATGTTGATATTGGAATTCCAGCAAATAACAAGGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCCAGGATGGTCCTGCAGATGCGTGGAACAATCCGTGC
CGGGCTTAAATGGGATGTGATGGTGGATTTGTTTTTCTACCGTGAGCCCGAGGAGGCCAAGGAGAAAGAGGAAGAAGAGGCTATTGCTGCGCCCCTAGATTATGGCATTG
CAGATTTTGGTGCTGCTCCGCTCGTTACCTCAGATCAATGGGCTGGACAAATTTCTGATGCTCAATGGGGTGCCCCTGATGTGGTTCCCCCACCAGATGCTGCTTTAGTT
CCTCCACCGGTTTCAAATGTCGAGTGGTCCCAAGAGCCAGTTGCTTCATCAGACGGATGGCAAGCTGCAGTACCACCACCAGCACCTTCAGCTGAAGTTGGCGCCCCTCC
AGCTGCCAGTTGGTTTTGA
Protein sequenceShow/hide protein sequence
MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGLKWDVMVDLFFYREPEEAKEKEEEEA
IAAPLDYGIADFGAAPLVTSDQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVASSDGWQAAVPPPAPSAEVGAPPAASWF