| GenBank top hits | e value | %identity | Alignment |
|---|
| AAN06870.1 Putative gag-pol polyprotein [Oryza sativa Japonica Group] | 3.6e-191 | 56.48 | Show/hide |
Query: ASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESSVAGQ------PTAIA-SVAPLATADTAVPSNVDHAPTTHPY----GTRLKHNIKKPK
A+ P S A+ V E+S P + P S VA Q PTA + S P + D +V VD H TRL+ I+K K
Subjt: ASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESSVAGQ------PTAIA-SVAPLATADTAVPSNVDHAPTTHPY----GTRLKHNIKKPK
Query: VRTDGTVTYLVA-RSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDT
V TDGTV Y + EP + A++ ++AM+ EF ALQ NKTWHLVPP+ G NVIDCKWV+K+K+K DGS+DRYKARLVAKGFKQ+YG+DY+DT
Subjt: VRTDGTVTYLVA-RSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDT
Query: FSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFI
FSPVVK TIR++LS+A+S GW +RQ+D+QNAFLHG+L E+VYMKQPPG+ DS PGY+CKLDK+LYG KQAP AW+SRLS KL + F SK D SLF
Subjt: FSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFI
Query: FNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGE
+NK + +++LIYVDDII+ SS A LL LQ +FA+KDLG L YFLGIEV S G++LTQ KY+ DLL R NM K V TP+ SEKL +N G+
Subjt: FNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGE
Query: KLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFG
L P D T YRSVVGALQYL+LTRPDI+F VN+VCQF+ +PT+ HWAAVKRIL YL +GL L+KS + L+SA+SDADWAG+ DDRRSTGG+ +F G
Subjt: KLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFG
Query: GNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSK
NL+SWS+RKQ+TVSRSSTE+EYKA+ANATAE++W+Q LL EL + LWCDN+GA YLSANP+FH RTKH+EVDYHFVRERVS + L++ + +
Subjt: GNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSK
Query: DQLADIMTKPLPASSFSYFRRNLNL
DQ+AD TK L F+ NLNL
Subjt: DQLADIMTKPLPASSFSYFRRNLNL
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| BAH94406.1 Os08g0544300 [Oryza sativa Japonica Group] | 6.6e-193 | 58.19 | Show/hide |
Query: ESSVAGQPTAIASVAPLATADTAVPSNV-----DHAPTTHPYG--------TRLKHNIKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDE
E V P +S +P + V +V D P TRL+ I+K KV TDGTV +L SS EP S A+ + ++AM+ E
Subjt: ESSVAGQPTAIASVAPLATADTAVPSNV-----DHAPTTHPYG--------TRLKHNIKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDE
Query: FQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLN
+ AL +NKTWHLVPP+ G NVIDCKWV+K+K+K DGS+DRYKARLVAKGFKQ+YG+DY+DTFSPVVK TIR++LSLA+S GW++RQ+D++NAFLHG+L
Subjt: FQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLN
Query: EDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFA
E+VYM+QPPG+ P Y+CKLDK+LYG KQAP AW+SRLS+KL +L F PSK D SLF + K + +++LIYVDDII+ SS AT LL +L DFA
Subjt: EDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFA
Query: VKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMS
+KDLG L YFLGIEV GL+L+Q KY DLL R M K V TP+ SEKL +N G L P+D+T+YRSVVGALQYL+LTRPDISF +N+VCQF+
Subjt: VKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMS
Query: SPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVL
+PT+ HWAAVKRIL Y+ T+D GL ++ + L+S FSDADWAG+PDDRRSTGG+ +F G NL+SWS+RKQ+TVSRSSTEAEYKA+ANATAE++W+Q L
Subjt: SPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVL
Query: LRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLADIMTKPLPASSFSYFRRNLNL
L+ELG+ RA LWCDN+GA YLSANPIFH RTKH+EVD+HFVRERV+ + L++ IS+KDQ+AD TK +P F+ NLNL
Subjt: LRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLADIMTKPLPASSFSYFRRNLNL
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| pir|T02087| gag/pol polyprotein - maize retrotransposon Hopscotch [Zea mays] | 7.0e-195 | 58.56 | Show/hide |
Query: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSVAGQPTAIASVAPLATAD---TAVPSNVDH-APTTHPYG-----TRLKHN
+ +A LP + ALV ++ A++P P A +S +G P A SV + AD A S+V H P + P TRL+H
Subjt: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSVAGQPTAIASVAPLATAD---TAVPSNVDH-APTTHPYG-----TRLKHN
Query: IKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
I KPK TDGTV Y A + +EP+S A+ P R AM EFQALQKN TW LVPP N+IDCKWVFK+K DGSIDR KARLVAKGFKQQYG+D
Subjt: IKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
Query: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
YDDTFSPVVK +TIRL+LSLA+S W++RQ+D+QNAFLHG+L E VYMKQPPGF D+ HP Y C L KSLYG KQ P AW+SRLS KL L F PSK DV
Subjt: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
Query: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
SLFI+N +YIL+YVDDIII SS A + +L +L+DDFA+KDLG L YFLGIEV GL+L Q KY RDLL R M K V TP+ SEKL
Subjt: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
Query: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
+ G LSPE+TT+YRSVVGALQYL+LTRPD+S+ +NRVCQF+ +PT +HW AVKRIL + TI +GL + S + +LSAFSDADWAG PDDR+STGGY
Subjt: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
Query: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
+F G NLISW+S+KQSTVSRSSTEAEYKA+ANATAE+IW+Q LL ELGI P LWCDN+GATYLS+ PIF+ RTKH+EVD+HFVR+RV +++LD+RL
Subjt: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
Query: ISSKDQLADIMTKPLPASSFSYFRR
IS+ DQ+AD TK L + FRR
Subjt: ISSKDQLADIMTKPLPASSFSYFRR
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| QCC26836.1 Hopscotch gagpol polyprotein [Zea mays] | 8.9e-198 | 58.98 | Show/hide |
Query: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSVAGQPTAIASVAPLATAD---TAVPSNVDH-APTTHPYG-----TRLKHN
+ +A LP + ALV ++ A++P P A +S +G P A SV + AD A S+V H P + P TRL+H
Subjt: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSVAGQPTAIASVAPLATAD---TAVPSNVDH-APTTHPYG-----TRLKHN
Query: IKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
I KPK TDGTV Y A + +EP+S A+ P R AM EFQALQKN TW LVPP N+IDCKWVFK+K DGSIDR KARLVAKGFKQQYG+D
Subjt: IKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
Query: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
YDDTFSPVVK +TIRL+LSLA+S W++RQ+D+QNAFLHG+L E VYMKQPPGF D+ HP Y C L KSLYG KQAP AW+SRLS KL L F PSK DV
Subjt: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
Query: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
SLFI+N +YIL+YVDDIII SS A + +L +L+DDFA+KDLG L YFLGIEV GL+L Q KY RDLL R M K V TP+ SEKL
Subjt: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
Query: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
+ G LSPE+TT+YRSVVGALQYL+LTRPD+S+ +NRVCQF+ +PT +HW AVKRIL + TI +GL + S + +LSAFSDADWAG PDDR+STGGY
Subjt: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
Query: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
+F G NLISW+S+KQSTVSRSSTEAEYKA+ANATAE+IW+Q LL ELGI P LWCDN+GATYLS+ PIF+ RTKH+EVD+HFVR+RV +++LD+RL
Subjt: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
Query: ISSKDQLADIMTKPLPASSFSYFRRNLNL
IS+ DQ+AD TK L + FRRNLNL
Subjt: ISSKDQLADIMTKPLPASSFSYFRRNLNL
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| RLM69625.1 putative polyprotein [Panicum miliaceum] | 7.8e-194 | 57.17 | Show/hide |
Query: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIA-----QCPVESSVAGQPTAIASVAPLATADTAVPSNVDHAPTTHPYGTRLKHNIKKPKVRT
+ S S + Q S + P + VVPP P + A + SS A T + AP A A PS V P TRL+ I+KPKV T
Subjt: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIA-----QCPVESSVAGQPTAIASVAPLATADTAVPSNVDHAPTTHPYGTRLKHNIKKPKVRT
Query: DGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPV
DGTV Y +++ EP S A+ + AM+ E+ AL NKTWHLVPP+ G NVIDCKWV+K+K+K DGS+DRYKARLVAKGF+Q+YG+DY+DTFSPV
Subjt: DGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPV
Query: VKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKT
VK TIR +L +A+S GW++R++D+QNAFLHG L EDVYMKQPPG+ D GY+CKLDK+LYG K+AP AW+SRLS+KL QL F SK D SLF +NK
Subjt: VKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKT
Query: GIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP
+ +YILIYVDDII+ SS+ AT LL L+ +FA+KDLG L +FLGIEV+ ++G++LTQ KY +D+L R +M+ K V +P+ SEKL + G+ L P
Subjt: GIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP
Query: EDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLI
+D T YRS+VG LQYL LTRPDISF VN+VCQ++ +PT++HWA VKRIL YL T+++GL + KS + L+SAFSDADWAG+ DDRRSTGG+ +F G NLI
Subjt: EDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLI
Query: SWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLA
SWS+RKQSTVSRSSTEAEYKAVANATAE++WIQ LL ELGI + LWCDNIGA YLSANP+FH RTKH+EVDYHFVRERV+ R LD+ IS++DQ+A
Subjt: SWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLA
Query: DIMTKPLPASSFSYFRRNLNL
+ TKPL + F+ NLNL
Subjt: DIMTKPLPASSFSYFRRNLNL
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A3L6Q0W7 Putative polyprotein | 3.8e-194 | 57.17 | Show/hide |
Query: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIA-----QCPVESSVAGQPTAIASVAPLATADTAVPSNVDHAPTTHPYGTRLKHNIKKPKVRT
+ S S + Q S + P + VVPP P + A + SS A T + AP A A PS V P TRL+ I+KPKV T
Subjt: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIA-----QCPVESSVAGQPTAIASVAPLATADTAVPSNVDHAPTTHPYGTRLKHNIKKPKVRT
Query: DGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPV
DGTV Y +++ EP S A+ + AM+ E+ AL NKTWHLVPP+ G NVIDCKWV+K+K+K DGS+DRYKARLVAKGF+Q+YG+DY+DTFSPV
Subjt: DGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPV
Query: VKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKT
VK TIR +L +A+S GW++R++D+QNAFLHG L EDVYMKQPPG+ D GY+CKLDK+LYG K+AP AW+SRLS+KL QL F SK D SLF +NK
Subjt: VKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKT
Query: GIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP
+ +YILIYVDDII+ SS+ AT LL L+ +FA+KDLG L +FLGIEV+ ++G++LTQ KY +D+L R +M+ K V +P+ SEKL + G+ L P
Subjt: GIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP
Query: EDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLI
+D T YRS+VG LQYL LTRPDISF VN+VCQ++ +PT++HWA VKRIL YL T+++GL + KS + L+SAFSDADWAG+ DDRRSTGG+ +F G NLI
Subjt: EDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLI
Query: SWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLA
SWS+RKQSTVSRSSTEAEYKAVANATAE++WIQ LL ELGI + LWCDNIGA YLSANP+FH RTKH+EVDYHFVRERV+ R LD+ IS++DQ+A
Subjt: SWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLA
Query: DIMTKPLPASSFSYFRRNLNL
+ TKPL + F+ NLNL
Subjt: DIMTKPLPASSFSYFRRNLNL
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| A0A4D6GKR5 Hopscotch gagpol polyprotein | 4.3e-198 | 58.98 | Show/hide |
Query: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSVAGQPTAIASVAPLATAD---TAVPSNVDH-APTTHPYG-----TRLKHN
+ +A LP + ALV ++ A++P P A +S +G P A SV + AD A S+V H P + P TRL+H
Subjt: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSVAGQPTAIASVAPLATAD---TAVPSNVDH-APTTHPYG-----TRLKHN
Query: IKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
I KPK TDGTV Y A + +EP+S A+ P R AM EFQALQKN TW LVPP N+IDCKWVFK+K DGSIDR KARLVAKGFKQQYG+D
Subjt: IKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
Query: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
YDDTFSPVVK +TIRL+LSLA+S W++RQ+D+QNAFLHG+L E VYMKQPPGF D+ HP Y C L KSLYG KQAP AW+SRLS KL L F PSK DV
Subjt: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
Query: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
SLFI+N +YIL+YVDDIII SS A + +L +L+DDFA+KDLG L YFLGIEV GL+L Q KY RDLL R M K V TP+ SEKL
Subjt: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
Query: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
+ G LSPE+TT+YRSVVGALQYL+LTRPD+S+ +NRVCQF+ +PT +HW AVKRIL + TI +GL + S + +LSAFSDADWAG PDDR+STGGY
Subjt: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
Query: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
+F G NLISW+S+KQSTVSRSSTEAEYKA+ANATAE+IW+Q LL ELGI P LWCDN+GATYLS+ PIF+ RTKH+EVD+HFVR+RV +++LD+RL
Subjt: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
Query: ISSKDQLADIMTKPLPASSFSYFRRNLNL
IS+ DQ+AD TK L + FRRNLNL
Subjt: ISSKDQLADIMTKPLPASSFSYFRRNLNL
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| C7J5P9 Os08g0544300 protein | 3.2e-193 | 58.19 | Show/hide |
Query: ESSVAGQPTAIASVAPLATADTAVPSNV-----DHAPTTHPYG--------TRLKHNIKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDE
E V P +S +P + V +V D P TRL+ I+K KV TDGTV +L SS EP S A+ + ++AM+ E
Subjt: ESSVAGQPTAIASVAPLATADTAVPSNV-----DHAPTTHPYG--------TRLKHNIKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDE
Query: FQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLN
+ AL +NKTWHLVPP+ G NVIDCKWV+K+K+K DGS+DRYKARLVAKGFKQ+YG+DY+DTFSPVVK TIR++LSLA+S GW++RQ+D++NAFLHG+L
Subjt: FQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLN
Query: EDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFA
E+VYM+QPPG+ P Y+CKLDK+LYG KQAP AW+SRLS+KL +L F PSK D SLF + K + +++LIYVDDII+ SS AT LL +L DFA
Subjt: EDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFA
Query: VKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMS
+KDLG L YFLGIEV GL+L+Q KY DLL R M K V TP+ SEKL +N G L P+D+T+YRSVVGALQYL+LTRPDISF +N+VCQF+
Subjt: VKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMS
Query: SPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVL
+PT+ HWAAVKRIL Y+ T+D GL ++ + L+S FSDADWAG+PDDRRSTGG+ +F G NL+SWS+RKQ+TVSRSSTEAEYKA+ANATAE++W+Q L
Subjt: SPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVL
Query: LRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLADIMTKPLPASSFSYFRRNLNL
L+ELG+ RA LWCDN+GA YLSANPIFH RTKH+EVD+HFVRERV+ + L++ IS+KDQ+AD TK +P F+ NLNL
Subjt: LRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLADIMTKPLPASSFSYFRRNLNL
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| Q10RF3 Putative gag-pol polyprotein | 1.7e-191 | 56.48 | Show/hide |
Query: ASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESSVAGQ------PTAIA-SVAPLATADTAVPSNVDHAPTTHPY----GTRLKHNIKKPK
A+ P S A+ V E+S P + P S VA Q PTA + S P + D +V VD H TRL+ I+K K
Subjt: ASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESSVAGQ------PTAIA-SVAPLATADTAVPSNVDHAPTTHPY----GTRLKHNIKKPK
Query: VRTDGTVTYLVA-RSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDT
V TDGTV Y + EP + A++ ++AM+ EF ALQ NKTWHLVPP+ G NVIDCKWV+K+K+K DGS+DRYKARLVAKGFKQ+YG+DY+DT
Subjt: VRTDGTVTYLVA-RSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDT
Query: FSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFI
FSPVVK TIR++LS+A+S GW +RQ+D+QNAFLHG+L E+VYMKQPPG+ DS PGY+CKLDK+LYG KQAP AW+SRLS KL + F SK D SLF
Subjt: FSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFI
Query: FNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGE
+NK + +++LIYVDDII+ SS A LL LQ +FA+KDLG L YFLGIEV S G++LTQ KY+ DLL R NM K V TP+ SEKL +N G+
Subjt: FNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGE
Query: KLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFG
L P D T YRSVVGALQYL+LTRPDI+F VN+VCQF+ +PT+ HWAAVKRIL YL +GL L+KS + L+SA+SDADWAG+ DDRRSTGG+ +F G
Subjt: KLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFG
Query: GNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSK
NL+SWS+RKQ+TVSRSSTE+EYKA+ANATAE++W+Q LL EL + LWCDN+GA YLSANP+FH RTKH+EVDYHFVRERVS + L++ + +
Subjt: GNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSK
Query: DQLADIMTKPLPASSFSYFRRNLNL
DQ+AD TK L F+ NLNL
Subjt: DQLADIMTKPLPASSFSYFRRNLNL
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| V9GZT4 Copia-like retrotransposon Hopscotch polyprotein | 3.4e-195 | 58.56 | Show/hide |
Query: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSVAGQPTAIASVAPLATAD---TAVPSNVDH-APTTHPYG-----TRLKHN
+ +A LP + ALV ++ A++P P A +S +G P A SV + AD A S+V H P + P TRL+H
Subjt: STSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQC----PVESSVAGQPTAIASVAPLATAD---TAVPSNVDH-APTTHPYG-----TRLKHN
Query: IKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
I KPK TDGTV Y A + +EP+S A+ P R AM EFQALQKN TW LVPP N+IDCKWVFK+K DGSIDR KARLVAKGFKQQYG+D
Subjt: IKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
Query: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
YDDTFSPVVK +TIRL+LSLA+S W++RQ+D+QNAFLHG+L E VYMKQPPGF D+ HP Y C L KSLYG KQ P AW+SRLS KL L F PSK DV
Subjt: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
Query: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
SLFI+N +YIL+YVDDIII SS A + +L +L+DDFA+KDLG L YFLGIEV GL+L Q KY RDLL R M K V TP+ SEKL
Subjt: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
Query: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
+ G LSPE+TT+YRSVVGALQYL+LTRPD+S+ +NRVCQF+ +PT +HW AVKRIL + TI +GL + S + +LSAFSDADWAG PDDR+STGGY
Subjt: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
Query: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
+F G NLISW+S+KQSTVSRSSTEAEYKA+ANATAE+IW+Q LL ELGI P LWCDN+GATYLS+ PIF+ RTKH+EVD+HFVR+RV +++LD+RL
Subjt: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
Query: ISSKDQLADIMTKPLPASSFSYFRR
IS+ DQ+AD TK L + FRR
Subjt: ISSKDQLADIMTKPLPASSFSYFRR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-96 | 37.92 | Show/hide |
Query: QAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAF
+A+N E A + N TW + N++D +WVF +K G+ RYKARLVA+GF Q+Y +DY++TF+PV ++++ R +LSL I + Q+D++ AF
Subjt: QAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAF
Query: LHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKTGI--QMYILIYVDDIIIISSSSTATEKLL
L+G L E++YM+ P G S + +CKL+K++YG KQA WF L + +F S VD ++I +K I +Y+L+YVDD++I + T
Subjt: LHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKTGI--QMYILIYVDDIIIISSSSTATEKLL
Query: TQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSE--KLLLNGGEKLSPEDTTRYRSVVGALQYLSL-TRPDIS
L + F + DL + +F+GI + + L+Q Y++ +L++ NM V TP LPS+ LLN E + T RS++G L Y+ L TRPD++
Subjt: TQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSE--KLLLNGGEKLSPEDTTRYRSVVGALQYLSL-TRPDIS
Query: FCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSST--DLLSAFSDADWAGNPDDRRSTGGYVI-FFGGNLISWSSRKQSTVSRSSTEAEYKA
VN + ++ S S W +KR+L YL TIDM L K+ + + + D+DWAG+ DR+ST GY+ F NLI W++++Q++V+ SSTEAEY A
Subjt: FCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSST--DLLSAFSDADWAGNPDDRRSTGGYVI-FFGGNLISWSSRKQSTVSRSSTEAEYKA
Query: VANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLADIMTKPLPASSFSYFRRNLNL
+ A E +W++ LL + I ++ DN G ++ NP H+R KH+++ YHF RE+V + + I +++QLADI TKPLPA+ F R L L
Subjt: VANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLADIMTKPLPASSFSYFRRNLNL
Query: V
+
Subjt: V
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-99 | 40.77 | Show/hide |
Query: TYLVARSSASEPTSHITAMEHPLCRQ---AMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVV
T V S EP S + HP Q AM +E ++LQKN T+ LV G + CKWVFKLK+ D + RYKARLV KGF+Q+ G+D+D+ FSPVV
Subjt: TYLVARSSASEPTSHITAMEHPLCRQ---AMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVV
Query: KLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFI--FNK
K+T+IR +LSLA S + Q+D++ AFLHG L E++YM+QP GF + +CKL+KSLYG KQAP W+ + S + + + D ++ F++
Subjt: KLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFI--FNK
Query: TGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEV--RHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLP----SEKLLLN
+ +L+YVDD++I+ KL L F +KDLG LG+++ TS L L+Q KYI +L R NM +K V TP+ S+K+
Subjt: TGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEV--RHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLP----SEKLLLN
Query: GGEKLSPEDTTRYRSVVGALQY-LSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
E+ Y S VG+L Y + TRPDI+ V V +F+ +P HW AVK IL YL T LC S +L ++DAD AG+ D+R+S+ GY+
Subjt: GGEKLSPEDTTRYRSVVGALQY-LSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
Query: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
F G ISW S+ Q V+ S+TEAEY A E+IW++ L+ELG+ Q + ++CD+ A LS N ++H RTKH++V YH++RE V L V
Subjt: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
Query: ISSKDQLADIMTKPLPASSF
IS+ + AD++TK +P + F
Subjt: ISSKDQLADIMTKPLPASSF
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 9.9e-51 | 48.47 | Show/hide |
Query: MYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP-ED
MY+L+YVDDI++ SS+T L+ QL F++KDLG + YFLGI+++ SGL L+Q KY +L ML K + TP+ L LN + D
Subjt: MYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP-ED
Query: TTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISW
+ +RS+VGALQYL+LTRPDIS+ VN VCQ M PT + +KR+L Y+ TI GL + K+S + AF D+DWAG RRST G+ F G N+ISW
Subjt: TTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISW
Query: SSRKQSTVSRSSTEAEYKAVANATAELIW
S+++Q TVSRSSTE EY+A+A AEL W
Subjt: SSRKQSTVSRSSTEAEYKAVANATAELIW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.2e-150 | 46.58 | Show/hide |
Query: PTNSLDAENLVSTSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESSVAGQPTAIASVAPLATADTAVPSNVDHAP-TTHPYGTRLKHNI
PT + + ++ P S S +S L P +S+P P + SS + P +I P A + +N + AP TH GTR K I
Subjt: PTNSLDAENLVSTSASKLPQQSSASLPCESALVVPPMIEASAPPPADDIAQCPVESSVAGQPTAIASVAPLATADTAVPSNVDHAP-TTHPYGTRLKHNI
Query: KKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLV-PPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
KP + + V+ ++ SEP + I A++ R AM E A N TW LV PP + ++ C+W+F K DGS++RYKARLVAKG+ Q+ G+D
Subjt: KKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLV-PPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVD
Query: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
Y +TFSPV+K T+IR++L +A+ W IRQ+D+ NAFL G L +DVYM QPPGF+D P Y+CKL K+LYG KQAP AW+ L + LL + F S D
Subjt: YDDTFSPVVKLTTIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDV
Query: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
SLF+ + +Y+L+YVDDI+I + T L L F+VKD L YFLGIE + +GL L+Q +YI DLLARTNM+T+K V TPM PS KL L
Subjt: SLFIFNKTGIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLL
Query: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
G KL+ D T YR +VG+LQYL+ TRPDIS+ VNR+ QFM PT H A+KRIL YL T + G+ L K +T L A+SDADWAG+ DD ST GY+
Subjt: NGGEKLSPEDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYV
Query: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
++ G + ISWSS+KQ V RSSTEAEY++VAN ++E+ WI LL ELGI R P ++CDN+GATYL ANP+FH R KH+ +DYHF+R +V + L V
Subjt: IFFGGNLISWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRL
Query: ISSKDQLADIMTKPLPASSFSYFRRNLNL
+S+ DQLAD +TKPL ++F F + +
Subjt: ISSKDQLADIMTKPLPASSFSYFRRNLNL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.5e-150 | 46.24 | Show/hide |
Query: PQQSSASLPCE-SALVVPPMIEASAPPPADDIAQCPVESSVAGQPTAIASVAPLATADTAVPSNVDHAPTTHPYGTRLKHNIKKPKVRTDGTVTYLVARS
P S + P + S L P+ P P+ I++ +S + T+ + P+ A + N TH TR K I+KP + +Y + +
Subjt: PQQSSASLPCE-SALVVPPMIEASAPPPADDIAQCPVESSVAGQPTAIASVAPLATADTAVPSNVDHAPTTHPYGTRLKHNIKKPKVRTDGTVTYLVARS
Query: SASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLV-PPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLTTIRLLL
+ SEP + I AM+ RQAM E A N TW LV PP ++ C+W+F K DGS++RYKARLVAKG+ Q+ G+DY +TFSPV+K T+IR++L
Subjt: SASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLV-PPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLTTIRLLL
Query: SLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKTGIQMYILIYV
+A+ W IRQ+D+ NAFL G L ++VYM QPPGFVD P Y+C+L K++YG KQAP AW+ L + LL + F S D SLF+ + +Y+L+YV
Subjt: SLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFVDSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKTGIQMYILIYV
Query: DDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSPEDTTRYRSVV
DDI+I + + + L L F+VK+ L YFLGIE + GL L+Q +Y DLLARTNMLT+K V TPM S KL L+ G KL D T YR +V
Subjt: DDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSPEDTTRYRSVV
Query: GALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTV
G+LQYL+ TRPD+S+ VNR+ Q+M PT HW A+KR+L YL T D G+ L K +T L A+SDADWAG+ DD ST GY+++ G + ISWSS+KQ V
Subjt: GALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISWSSRKQSTV
Query: SRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLADIMTKPLPAS
RSSTEAEY++VAN ++EL WI LL ELGI + P ++CDN+GATYL ANP+FH R KH+ +DYHF+R +V + L V +S+ DQLAD +TKPL
Subjt: SRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRERVSTRQLDVRLISSKDQLADIMTKPLPAS
Query: SFSYFRRNLNLV
+F F R + ++
Subjt: SFSYFRRNLNLV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G12050.1 Aha1 domain-containing protein | 3.0e-10 | 39.81 | Show/hide |
Query: VEARRVTTVCEKANFGKKGGGDLVGKEASVELRFR-------GKSLKKVDSLLEILYIFDENVDEDHEVMVFVNVEGKIGKKIKEAILVKGKPIGLEKVR
++ ++ V +A + G + G E +V L + GK+L K D L+++ YI DEN DED E+ V EG IG+ +KEA++ KGK I LEKVR
Subjt: VEARRVTTVCEKANFGKKGGGDLVGKEASVELRFR-------GKSLKKVDSLLEILYIFDENVDEDHEVMVFVNVEGKIGKKIKEAILVKGKPIGLEKVR
Query: LYV
+YV
Subjt: LYV
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.4e-111 | 42.74 | Show/hide |
Query: TYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLT
++LV + A EP+++ A E + AM+DE A++ TW + I CKWV+K+K DG+I+RYKARLVAKG+ QQ G+D+ +TFSPV KLT
Subjt: TYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFKQQYGVDYDDTFSPVVKLT
Query: TIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFV----DSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKT
+++L+L+++ + + Q+DI NAFL+G L+E++YMK PPG+ DS P +C L KS+YG KQA WF + S L+ F S D + F+
Subjt: TIRLLLSLAISCGWAIRQIDIQNAFLHGLLNEDVYMKQPPGFV----DSQHPGYLCKLDKSLYGFKQAPHAWFSRLSSKLLQLDFTPSKVDVSLFIFNKT
Query: GIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP
+ + +L+YVDDIII S++ A ++L +QL+ F ++DLG L YFLG+E+ +++G+ + Q KY DLL T +L K PM PS + G
Subjt: GIQMYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP
Query: EDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLI
D YR ++G L YL +TR DISF VN++ QF +P H AV +ILHY+ T+ GL + + L FSDA + D RRST GY +F G +LI
Subjt: EDTTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLI
Query: SWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRER
SW S+KQ VS+SS EAEY+A++ AT E++W+ REL + ++ L+CDN A +++ N +FH RTKH+E D H VRER
Subjt: SWSSRKQSTVSRSSTEAEYKAVANATAELIWIQVLLRELGISQARAPSLWCDNIGATYLSANPIFHRRTKHVEVDYHFVRER
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.0e-13 | 45.45 | Show/hide |
Query: YLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGY
YL++TRPD++F VNR+ QF S+ + AV ++LHY+ T+ GL + +S L AF+D+DWA PD RRS G+
Subjt: YLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGY
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 7.1e-52 | 48.47 | Show/hide |
Query: MYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP-ED
MY+L+YVDDI++ SS+T L+ QL F++KDLG + YFLGI+++ SGL L+Q KY +L ML K + TP+ L LN + D
Subjt: MYILIYVDDIIIISSSSTATEKLLTQLQDDFAVKDLGILSYFLGIEVRHTSSGLILTQHKYIRDLLARTNMLTSKGVPTPMLPSEKLLLNGGEKLSP-ED
Query: TTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISW
+ +RS+VGALQYL+LTRPDIS+ VN VCQ M PT + +KR+L Y+ TI GL + K+S + AF D+DWAG RRST G+ F G N+ISW
Subjt: TTRYRSVVGALQYLSLTRPDISFCVNRVCQFMSSPTSIHWAAVKRILHYLHDTIDMGLCLTKSSTDLLSAFSDADWAGNPDDRRSTGGYVIFFGGNLISW
Query: SSRKQSTVSRSSTEAEYKAVANATAELIW
S+++Q TVSRSSTE EY+A+A AEL W
Subjt: SSRKQSTVSRSSTEAEYKAVANATAELIW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.5e-25 | 47.24 | Show/hide |
Query: TRLKHNIKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFK
TR K I K + T+T + + EP S I A++ P QAM +E AL +NKTW LVPP N++ CKWVFK K DG++DR KARLVAKGF
Subjt: TRLKHNIKKPKVRTDGTVTYLVARSSASEPTSHITAMEHPLCRQAMNDEFQALQKNKTWHLVPPRAGFNVIDCKWVFKLKQKPDGSIDRYKARLVAKGFK
Query: QQYGVDYDDTFSPVVKLTTIRLLLSLA
Q+ G+ + +T+SPVV+ TIR +L++A
Subjt: QQYGVDYDDTFSPVVKLTTIRLLLSLA
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