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CmoCh14G012740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G012740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationCmo_Chr14:10693531..10693861
RNA-Seq ExpressionCmoCh14G012740
SyntenyCmoCh14G012740
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581828.1 hypothetical protein SDJN03_21830, partial [Cucurbita argyrosperma subsp. sororia]3.1e-0950Show/hide
Query:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        + Y  YSMAN +SFMASVGVILL ISRVPLKN+  S +L +AM  AVVFL   +L G  M+++   +    +  Y    +FL  LVGL
Subjt:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

XP_022955455.1 uncharacterized protein LOC111457477 isoform X1 [Cucurbita moschata]4.1e-0950Show/hide
Query:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        + Y  YSMAN +SFMASVGVILL ISRVPLKN+  S +L +AM  AVVFL   +L G  M+++   +    +  Y    +FL  LVGL
Subjt:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

XP_022955457.1 uncharacterized protein LOC111457477 isoform X2 [Cucurbita moschata]4.1e-0950Show/hide
Query:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        + Y  YSMAN +SFMASVGVILL ISRVPLKN+  S +L +AM  AVVFL   +L G  M+++   +    +  Y    +FL  LVGL
Subjt:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

XP_022955459.1 ankyrin repeat-containing protein At5g02620-like isoform X4 [Cucurbita moschata]4.1e-0950Show/hide
Query:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        + Y  YSMAN +SFMASVGVILL ISRVPLKN+  S +L +AM  AVVFL   +L G  M+++   +    +  Y    +FL  LVGL
Subjt:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

XP_023528990.1 ankyrin repeat-containing protein At5g02620-like isoform X3 [Cucurbita pepo subsp. pepo]7.0e-0951.81Show/hide
Query:  YSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        YSMAN +SFMASV VILL ISRVPLKN+  S +L +AM  AVVFL   +L G  M+++   +    +  Y F  +FL  LVGL
Subjt:  YSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

TrEMBL top hitse value%identityAlignment
A0A6J1GTP7 uncharacterized protein LOC111457477 isoform X22.0e-0950Show/hide
Query:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        + Y  YSMAN +SFMASVGVILL ISRVPLKN+  S +L +AM  AVVFL   +L G  M+++   +    +  Y    +FL  LVGL
Subjt:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

A0A6J1GU04 ankyrin repeat-containing protein NPR4-like isoform X35.7e-0951.81Show/hide
Query:  YSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        YSMAN +SFMASV VILL ISRVPLKN+  S +L +AM VAVVFL   +L G  M+++   +    +  Y    +FL  LVGL
Subjt:  YSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

A0A6J1GV64 uncharacterized protein LOC111457477 isoform X12.0e-0950Show/hide
Query:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        + Y  YSMAN +SFMASVGVILL ISRVPLKN+  S +L +AM  AVVFL   +L G  M+++   +    +  Y    +FL  LVGL
Subjt:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

A0A6J1GWC0 ankyrin repeat-containing protein At5g02620-like isoform X42.0e-0950Show/hide
Query:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        + Y  YSMAN +SFMASVGVILL ISRVPLKN+  S +L +AM  AVVFL   +L G  M+++   +    +  Y    +FL  LVGL
Subjt:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

A0A6J1IX06 ankyrin repeat-containing protein NPR4-like isoform X22.2e-0848.86Show/hide
Query:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL
        + Y  YS+AN +SFMASV VILL ISRVPLKN+  S +L +AM  AVVFL   +L G  M+++    Q      Y    +FL  LVGL
Subjt:  MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTACTGGAGGTACTCAATGGCAAACACACTGTCATTTATGGCTTCTGTGGGCGTGATTTTGCTAACCATCAGTCGAGTTCCACTCAAAAATAAGTTCTCTAGTTG
CATGTTAACGATTGCCATGTTTGTTGCAGTGGTGTTCTTAATATTTGGGTATCTACTTGGAGTTGGAATGATTAGCATCAACCGTTCCCACCAACCTATTACAAGTAGTG
CCTATTCATTTGGAAGTTTCTTTTTGCTTGTGTTGGTTGGATTGTCAACTTATTCTGCACTTTACACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTACTGGAGGTACTCAATGGCAAACACACTGTCATTTATGGCTTCTGTGGGCGTGATTTTGCTAACCATCAGTCGAGTTCCACTCAAAAATAAGTTCTCTAGTTG
CATGTTAACGATTGCCATGTTTGTTGCAGTGGTGTTCTTAATATTTGGGTATCTACTTGGAGTTGGAATGATTAGCATCAACCGTTCCCACCAACCTATTACAAGTAGTG
CCTATTCATTTGGAAGTTTCTTTTTGCTTGTGTTGGTTGGATTGTCAACTTATTCTGCACTTTACACTTGA
Protein sequenceShow/hide protein sequence
MHYWRYSMANTLSFMASVGVILLTISRVPLKNKFSSCMLTIAMFVAVVFLIFGYLLGVGMISINRSHQPITSSAYSFGSFFLLVLVGLSTYSALYT