CuGenDBv2

Gene ID	CmoCh14G012750
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	ankyrin repeat-containing protein NPR4-like
Genome location	Cmo_Chr14:10694132..10694775
RNA-Seq Expression	CmoCh14G012750
Synteny	CmoCh14G012750
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR036770 - Ankyrin repeat-containing domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581827.1 Ankyrin repeat-containing protein BDA1, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-36

75.23

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Query:  MEEIHPQPIPSSISPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLN
        MEEIHPQPIPSS SPYQPNQEI IVMQSEVDAFQPTPLHLASKNGD+D       NNTSACLVY+ +GFIPLHY VI+GQ+EIM+ELI+A P+S+WM LN
Subjt:  MEEIHPQPIPSSISPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLN

Query:  DDGRVFIFL
         DGR  + L
Subjt:  DDGRVFIFL

XP_022956266.1 ankyrin repeat-containing protein NPR4-like [Cucurbita moschata]

6.5e-39

78.9

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Query:  MEEIHPQPIPSSISPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLN
        MEEIHPQPIPSS SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGD+D       NN SACLVYDNNGFIPLHY VI+GQ+EIM+ELI A P+S+WMKLN
Subjt:  MEEIHPQPIPSSISPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLN

Query:  DDGRVFIFL
         DGR  + L
Subjt:  DDGRVFIFL

XP_022980639.1 ankyrin repeat-containing protein NPR4-like isoform X1 [Cucurbita maxima]

4.2e-30

66.67

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Query:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG
        HP P  ++I      NQEI IVMQSEVDAFQPTPLHLASKNGD+D       NNTSACLVYDNNGFIPLHY VI+GQ+EIM+ELI+ARP+S+WMKLN DG
Subjt:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG

Query:  RVFIFL----DKLYSLK
        R  + L    D L S+K
Subjt:  RVFIFL----DKLYSLK

XP_022980640.1 ankyrin repeat-containing protein NPR4-like isoform X2 [Cucurbita maxima]

4.2e-30

66.67

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Query:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG
        HP P  ++I      NQEI IVMQSEVDAFQPTPLHLASKNGD+D       NNTSACLVYDNNGFIPLHY VI+GQ+EIM+ELI+ARP+S+WMKLN DG
Subjt:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG

Query:  RVFIFL----DKLYSLK
        R  + L    D L S+K
Subjt:  RVFIFL----DKLYSLK

XP_022980641.1 ankyrin repeat-containing protein NPR4-like isoform X3 [Cucurbita maxima]

4.2e-30

66.67

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Query:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG
        HP P  ++I      NQEI IVMQSEVDAFQPTPLHLASKNGD+D       NNTSACLVYDNNGFIPLHY VI+GQ+EIM+ELI+ARP+S+WMKLN DG
Subjt:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG

Query:  RVFIFL----DKLYSLK
        R  + L    D L S+K
Subjt:  RVFIFL----DKLYSLK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GV64 uncharacterized protein LOC111457477 isoform X1

1.1e-28

66.98

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Query:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG
        HP P  + I      NQEI IVMQSEVDAFQPTPLHLASKNGD+D       NNTSACLVYDN+GFIPLHY VI+GQ++IM+E I+ARP+S+WMKLN DG
Subjt:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG

Query:  RVFIFL
        R  + L
Subjt:  RVFIFL

A0A6J1GW32 ankyrin repeat-containing protein NPR4-like

3.1e-39

78.9

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Query:  MEEIHPQPIPSSISPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLN
        MEEIHPQPIPSS SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGD+D       NN SACLVYDNNGFIPLHY VI+GQ+EIM+ELI A P+S+WMKLN
Subjt:  MEEIHPQPIPSSISPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLN

Query:  DDGRVFIFL
         DGR  + L
Subjt:  DDGRVFIFL

A0A6J1IU53 ankyrin repeat-containing protein NPR4-like isoform X3

2.0e-30

66.67

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Query:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG
        HP P  ++I      NQEI IVMQSEVDAFQPTPLHLASKNGD+D       NNTSACLVYDNNGFIPLHY VI+GQ+EIM+ELI+ARP+S+WMKLN DG
Subjt:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG

Query:  RVFIFL----DKLYSLK
        R  + L    D L S+K
Subjt:  RVFIFL----DKLYSLK

A0A6J1IX06 ankyrin repeat-containing protein NPR4-like isoform X2

2.0e-30

66.67

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Query:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG
        HP P  ++I      NQEI IVMQSEVDAFQPTPLHLASKNGD+D       NNTSACLVYDNNGFIPLHY VI+GQ+EIM+ELI+ARP+S+WMKLN DG
Subjt:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG

Query:  RVFIFL----DKLYSLK
        R  + L    D L S+K
Subjt:  RVFIFL----DKLYSLK

A0A6J1IZU6 ankyrin repeat-containing protein NPR4-like isoform X1

2.0e-30

66.67

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Query:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG
        HP P  ++I      NQEI IVMQSEVDAFQPTPLHLASKNGD+D       NNTSACLVYDNNGFIPLHY VI+GQ+EIM+ELI+ARP+S+WMKLN DG
Subjt:  HPQPIPSSI-SPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDI------NNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDG

Query:  RVFIFL----DKLYSLK
        R  + L    D L S+K
Subjt:  RVFIFL----DKLYSLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G54710.1 Ankyrin repeat family protein

3.2e-04

37.68

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Query:  EVDAFQPTPLHLASKNG---------DMDINNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKS
        + D  Q T LH A K+G         D+D+N   A  V D +G  PLH  VI+G +EI++E +   P S
Subjt:  EVDAFQPTPLHLASKNG---------DMDINNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKS

Sequences

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CDS sequence

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ATGGAGGAGATTCACCCACAACCTATACCTTCTTCCATTTCTCCATATCAACCAAATCAAGAAATTAGCATTGTGATGCAATCTGAGGTTGATGCCTTTCAACCAACGCC
CCTCCACCTTGCTTCCAAAAATGGAGACATGGACATCAACAACACGAGTGCTTGCTTGGTTTACGATAACAACGGGTTCATTCCTCTCCATTATGAAGTAATTAGTGGAC
AAATCGAGATCATGCAAGAGCTTATTCATGCAAGACCAAAATCTGTATGGATGAAGCTCAACGACGATGGTAGAGTATTTATTTTTCTTGACAAACTTTACAGCCTCAAA
TGCTACGAAAGAAGGTACAGATTTACAAAAGACCAAGGCAAGAAAGCCTAA

mRNA sequence

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Protein sequence

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MEEIHPQPIPSSISPYQPNQEISIVMQSEVDAFQPTPLHLASKNGDMDINNTSACLVYDNNGFIPLHYEVISGQIEIMQELIHARPKSVWMKLNDDGRVFIFLDKLYSLK
CYERRYRFTKDQGKKA

CmoCh14G012750 (gene) of Cucurbita moschata (Rifu) v1 genome