CuGenDBv2

Gene ID	CmoCh14G013360
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	DNA-directed RNA polymerase subunit beta
Genome location	Cmo_Chr14:11137430..11140782
RNA-Seq Expression	CmoCh14G013360
Synteny	CmoCh14G013360
Gene Ontology terms	GO:0032774 - RNA biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581888.1 Peroxisome biogenesis protein 2, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-197

99.42

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA
        MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS FTHRLSNYFARIGPISA
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA

Query:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
        CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPI+NNMYGMGFDHSFG
Subjt:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG

Query:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
        LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
Subjt:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE

Query:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
Subjt:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

KAG7018321.1 Peroxisome biogenesis protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-197

99.42

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA
        MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS FTHRLSNYFARIGPISA
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA

Query:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
        CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPI+NNMYGMGFDHSFG
Subjt:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG

Query:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
        LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
Subjt:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE

Query:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
Subjt:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

XP_022956181.1 uncharacterized protein LOC111457951 [Cucurbita moschata]

2.6e-199

100

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFSFTHRLSNYFARIGPISAC
        MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFSFTHRLSNYFARIGPISAC
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFSFTHRLSNYFARIGPISAC

Query:  LALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGL
        LALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGL
Subjt:  LALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGL

Query:  WFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNEL
        WFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNEL
Subjt:  WFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNEL

Query:  KRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        KRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
Subjt:  KRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

XP_022980102.1 uncharacterized protein LOC111479593 [Cucurbita maxima]

2.3e-195

98.25

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA
        MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTM AQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKT+KHNFS FTHRLSNYFARIGPISA
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA

Query:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
        CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFG+LGVPWCRSKHGKTVEWT KDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
Subjt:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG

Query:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
        LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKK+MKEHGIDDLSRVLVFFDDHQNE
Subjt:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE

Query:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
Subjt:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

XP_023528605.1 uncharacterized protein LOC111791475 [Cucurbita pepo subsp. pepo]

5.5e-197

99.12

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA
        MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSS PQSPTSKRMLDRALSSRRVPHH+GDLDDDDDDDDVSKTKKHNFS FTHRLSNYFARIGPISA
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA

Query:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
        CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
Subjt:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG

Query:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
        LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
Subjt:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE

Query:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
Subjt:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHM5 uncharacterized protein LOC103489955

1.5e-179

89.77

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA
        MK WQ KI SPK T+RLE+DHTNT MSFDT     S+TPQSPTS RML+RALSSRRVPHHSGD+DDDDDDDDVSKTKKHNFS FTHR+SNYF RIGPI A
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA

Query:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
        CLAL+ALILLLISSLIFFHSRRFVCVSSYD +SRSGFFG+DGLDSDFGSLGVPWCRSK GKTVEWT KDLLK LEEFVPIYETRPIKNNMYGMGFDHSFG
Subjt:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG

Query:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
        LWFIARWLKPDLMIESGAFKGHSTWVLRQAMP T IISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWK VMKEHGIDDLS+VLVFFDDHQNE
Subjt:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE

Query:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        LKRIKQA+ AGF+HLVFEDNYDTGTGDHYSLRQMCDQFYI+G
Subjt:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

A0A5A7U6D1 Uncharacterized protein

1.5e-179

89.77

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA
        MK WQ KI SPK T+RLE+DHTNT MSFDT     S+TPQSPTS RML+RALSSRRVPHHSGD+DDDDDDDDVSKTKKHNFS FTHR+SNYF RIGPI A
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA

Query:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
        CLAL+ALILLLISSLIFFHSRRFVCVSSYD +SRSGFFG+DGLDSDFGSLGVPWCRSK GKTVEWT KDLLK LEEFVPIYETRPIKNNMYGMGFDHSFG
Subjt:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG

Query:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
        LWFIARWLKPDLMIESGAFKGHSTWVLRQAMP T IISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWK VMKEHGIDDLS+VLVFFDDHQNE
Subjt:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE

Query:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        LKRIKQA+ AGF+HLVFEDNYDTGTGDHYSLRQMCDQFYI+G
Subjt:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

A0A6J1DJJ1 uncharacterized protein LOC111021111

6.1e-178

88.92

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTM-RAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPIS
        MKAWQSKI SPKQT+RLE+DHT++ MSFDT   R QSS+PQSPTS RML+R LS RRVP+HSGD+DD DDDD  SKTKKHNFS FTHR SNYFARIGPI 
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTM-RAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPIS

Query:  ACLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSF
        ACLALLALI L ISSLIFFHSRRFVCVS+YD +SRSGFFG+DGL+SDFGSLGVPWCRSKHGKTVEWT KDLL+GLEEFVPIYETRPIKNNMYGMGFDHSF
Subjt:  ACLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSF

Query:  GLWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQN
        GLWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDT IISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAW  VMKEHGIDDLSRVL+FFDDHQN
Subjt:  GLWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQN

Query:  ELKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        ELKRIKQA+KAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYI+G
Subjt:  ELKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

A0A6J1GVV2 uncharacterized protein LOC111457951

1.3e-199

100

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFSFTHRLSNYFARIGPISAC
        MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFSFTHRLSNYFARIGPISAC
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFSFTHRLSNYFARIGPISAC

Query:  LALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGL
        LALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGL
Subjt:  LALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGL

Query:  WFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNEL
        WFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNEL
Subjt:  WFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNEL

Query:  KRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        KRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
Subjt:  KRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

A0A6J1IQH4 uncharacterized protein LOC111479593

1.1e-195

98.25

Show/hide

Query:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA
        MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTM AQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKT+KHNFS FTHRLSNYFARIGPISA
Subjt:  MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFS-FTHRLSNYFARIGPISA

Query:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
        CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFG+LGVPWCRSKHGKTVEWT KDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG
Subjt:  CLALLALILLLISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFG

Query:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE
        LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKK+MKEHGIDDLSRVLVFFDDHQNE
Subjt:  LWFIARWLKPDLMIESGAFKGHSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNE

Query:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
        LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG
Subjt:  LKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLRQMCDQFYIKG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G16200.1 unknown protein

2.3e-129

72.58

Show/hide

Query:  SSTPQSPTSKRMLDRALSSRRVPHHSGDLD-DDDDDDDVSKTKKHNFSFTHRLSNYFARIGP---ISACLALLALILLLISSLIFFHSRRFVCVSSYDHI
        S +P++PT+  MLDRALSSRR PH   DL    +   D SKTK+ +       SN+ +RIG        LALL L+LL + S + FHS  FVC+S +D  
Subjt:  SSTPQSPTSKRMLDRALSSRRVPHHSGDLD-DDDDDDDVSKTKKHNFSFTHRLSNYFARIGP---ISACLALLALILLLISSLIFFHSRRFVCVSSYDHI

Query:  SRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFIARWLKPDLMIESGAFKGHSTWVLRQAMP
        +R GFFG+DGL+SDFG+LGVPWCRSKHGK VEWT+KDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWF+ARWLKPD+MIESGAFKGHSTWVLRQAMP
Subjt:  SRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFIARWLKPDLMIESGAFKGHSTWVLRQAMP

Query:  DTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNELKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLR
        DT +ISL+PRHPEKYL+KGPAYVD NCTYFAGKDFVDFGSV WK V+++HGI DLSRV+VFFDDHQNELKR+KQA+KAGF+HL+FEDNYDTGTGDHYSLR
Subjt:  DTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNELKRIKQAVKAGFQHLVFEDNYDTGTGDHYSLR

Query:  QMCDQFYIKG
        Q+CDQ +I+G
Subjt:  QMCDQFYIKG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGGCATGGCAATCCAAGATTTCAAGCCCAAAACAGACTGTTCGGTTAGAAATCGACCATACCAACACCGCCATGAGCTTCGACACCACCATGAGAGCTCAATCCTC
AACCCCTCAAAGCCCTACTTCCAAACGGATGCTTGACCGCGCCCTCTCCTCTCGTAGAGTCCCTCATCACAGCGGCGATCTTGACGACGACGACGACGACGACGATGTTT
CGAAGACGAAGAAGCACAATTTCTCCTTCACTCACCGGCTTTCCAATTACTTTGCTCGAATCGGACCCATTTCGGCCTGTCTTGCGCTCCTTGCCTTAATCCTTCTCTTG
ATTTCCTCTTTGATATTCTTTCACTCCCGCAGATTTGTGTGCGTTTCGTCTTATGATCATATTTCCCGCTCTGGATTCTTCGGCGTGGACGGGCTGGATTCGGATTTCGG
TTCCCTCGGTGTGCCCTGGTGCAGATCGAAACATGGAAAGACTGTGGAATGGACTACAAAAGATTTACTAAAGGGCTTGGAAGAGTTTGTCCCAATTTATGAGACTCGTC
CCATAAAAAACAACATGTATGGAATGGGTTTTGATCACAGCTTTGGCCTTTGGTTCATTGCTCGTTGGCTAAAGCCAGATTTGATGATTGAGAGTGGTGCATTCAAGGGA
CACTCAACTTGGGTGTTGCGGCAAGCAATGCCAGATACGGCAATTATTTCGCTATCACCTCGTCACCCCGAAAAATACTTGAAGAAAGGGCCTGCTTACGTTGATGCTAA
CTGTACGTACTTTGCTGGAAAGGATTTTGTAGATTTTGGAAGTGTTGCTTGGAAAAAAGTGATGAAAGAACATGGAATTGATGATCTTAGTCGAGTTCTTGTGTTTTTTG
ATGATCATCAGAATGAACTAAAGAGAATAAAGCAGGCTGTGAAAGCCGGCTTTCAACATCTTGTTTTTGAGGATAACTATGATACTGGTACAGGAGATCACTATTCTTTA
AGGCAGATGTGCGATCAGTTCTATATTAAAGGTGCCTGCTCTTCCACTTGA

mRNA sequence

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TTGTAGTCGAGTCGATCAGAGAAGGAAGGGGGAAATAAATGAAGGCATGGCAATCCAAGATTTCAAGCCCAAAACAGACTGTTCGGTTAGAAATCGACCATACCAACACC
GCCATGAGCTTCGACACCACCATGAGAGCTCAATCCTCAACCCCTCAAAGCCCTACTTCCAAACGGATGCTTGACCGCGCCCTCTCCTCTCGTAGAGTCCCTCATCACAG
CGGCGATCTTGACGACGACGACGACGACGACGATGTTTCGAAGACGAAGAAGCACAATTTCTCCTTCACTCACCGGCTTTCCAATTACTTTGCTCGAATCGGACCCATTT
CGGCCTGTCTTGCGCTCCTTGCCTTAATCCTTCTCTTGATTTCCTCTTTGATATTCTTTCACTCCCGCAGATTTGTGTGCGTTTCGTCTTATGATCATATTTCCCGCTCT
GGATTCTTCGGCGTGGACGGGCTGGATTCGGATTTCGGTTCCCTCGGTGTGCCCTGGTGCAGATCGAAACATGGAAAGACTGTGGAATGGACTACAAAAGATTTACTAAA
GGGCTTGGAAGAGTTTGTCCCAATTTATGAGACTCGTCCCATAAAAAACAACATGTATGGAATGGGTTTTGATCACAGCTTTGGCCTTTGGTTCATTGCTCGTTGGCTAA
AGCCAGATTTGATGATTGAGAGTGGTGCATTCAAGGGACACTCAACTTGGGTGTTGCGGCAAGCAATGCCAGATACGGCAATTATTTCGCTATCACCTCGTCACCCCGAA
AAATACTTGAAGAAAGGGCCTGCTTACGTTGATGCTAACTGTACGTACTTTGCTGGAAAGGATTTTGTAGATTTTGGAAGTGTTGCTTGGAAAAAAGTGATGAAAGAACA
TGGAATTGATGATCTTAGTCGAGTTCTTGTGTTTTTTGATGATCATCAGAATGAACTAAAGAGAATAAAGCAGGCTGTGAAAGCCGGCTTTCAACATCTTGTTTTTGAGG
ATAACTATGATACTGGTACAGGAGATCACTATTCTTTAAGGCAGATGTGCGATCAGTTCTATATTAAAGGTGCCTGCTCTTCCACTTGAGGTGGGCACAGTTGCTTCAAG
GACAGTGATGAAGCTAGAATCAGAGCAAAAAGGAAGTTGTTCTGGGAAAAGGCAGTGGATATAGAAGAACTTTGTGGTCCATATGAATCCTGGTGGGGTGTCCGAGGCTA
CATGCGTGACGATTTTAACCATAGTAATAGGGCTATTTCCCATGCCGAGCACTTCCAAAACAGCAGGTACCTGGAGTCAATTCTTGATGTTTATTGGGAGCTGCCTCCAG
TTGCTGGCCCTTCCTTAACACACCAGACTAGATACGATCCTGCTCGTGTTTCCAGCCCTATTGTCGAAGATGGCAGGTACGGGTTGTTCCGACGGCTTGGTTTAGCTCAA
CTCGAGACTTCTGTATTTAACGGATACACACAGATGGTCTATATTCAGGTATCTTAACAATAGCTGGGAGAGGATATGGCAGAGATTAGGCATTTTACCCTACTGTCAAT
AGTTAAAGACCTTAAGGTCTTACCTGGTTTATCTTGTAGTCGTCCCCTAGTCATGAAATGCCATCTTTTTTCCTCACCCCTTCTGTTTTTCATATTTGAAGTCAAGTTAG
GGACAGATGCTCTGTTCAAACATATTACTAGTGGTTTTGTTGATGACAGTTTTACACATCGCCCATACCGACATCCTGTGTTATCGAACCTCAATTAACTTTAGCAAACT
GTTTTCGTACCCGCTGCTCGTACGACCTACGAGCAATCTTTAGAGCCTTAGAGGGAACAAATTTGCAAATCATGCCATTGTGATCTACCGGACGTGACGAGAGGCTGATA
GGATAAACTAGATCATGATCGTGATAACCACCGCTGAATATGCTAAGAGAGATGTGTCCCTGTAAGTGTACATTTGATTCAGAAGATATTTGAAAGAGTAC

Protein sequence

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MKAWQSKISSPKQTVRLEIDHTNTAMSFDTTMRAQSSTPQSPTSKRMLDRALSSRRVPHHSGDLDDDDDDDDVSKTKKHNFSFTHRLSNYFARIGPISACLALLALILLL
ISSLIFFHSRRFVCVSSYDHISRSGFFGVDGLDSDFGSLGVPWCRSKHGKTVEWTTKDLLKGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFIARWLKPDLMIESGAFKG
HSTWVLRQAMPDTAIISLSPRHPEKYLKKGPAYVDANCTYFAGKDFVDFGSVAWKKVMKEHGIDDLSRVLVFFDDHQNELKRIKQAVKAGFQHLVFEDNYDTGTGDHYSL
RQMCDQFYIKGACSST

CmoCh14G013360 (gene) of Cucurbita moschata (Rifu) v1 genome