CuGenDBv2

Gene ID	CmoCh14G013370
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Peroxin-2
Genome location	Cmo_Chr14:11141110..11142977
RNA-Seq Expression	CmoCh14G013370
Synteny	CmoCh14G013370
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581888.1 Peroxisome biogenesis protein 2, partial [Cucurbita argyrosperma subsp. sororia]

8.3e-45

55.25

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Query:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------
        MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK            
Subjt:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------

Query:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE
                                                                                             R+LARRAWLLIQRIE
Subjt:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE

Query:  GIYKAAAFGNLLIFLYTGR
        GIYKAAAFGNLLIFLYTGR
Subjt:  GIYKAAAFGNLLIFLYTGR

KAG7018321.1 Peroxisome biogenesis protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.3e-45

55.25

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Query:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------
        MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK            
Subjt:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------

Query:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE
                                                                                             R+LARRAWLLIQRIE
Subjt:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE

Query:  GIYKAAAFGNLLIFLYTGR
        GIYKAAAFGNLLIFLYTGR
Subjt:  GIYKAAAFGNLLIFLYTGR

XP_022955862.1 peroxisome biogenesis protein 2-like [Cucurbita moschata]

2.9e-45

55.71

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Query:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------
        MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK            
Subjt:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------

Query:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE
                                                                                             RTLARRAWLLIQRIE
Subjt:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE

Query:  GIYKAAAFGNLLIFLYTGR
        GIYKAAAFGNLLIFLYTGR
Subjt:  GIYKAAAFGNLLIFLYTGR

XP_022980766.1 peroxisome biogenesis protein 2-like [Cucurbita maxima]

3.2e-44

54.79

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Query:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------
        MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLS IPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK            
Subjt:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------

Query:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE
                                                                                             R+LARRAWLLIQRIE
Subjt:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE

Query:  GIYKAAAFGNLLIFLYTGR
        GIYKAAAFGNLLIFLYTGR
Subjt:  GIYKAAAFGNLLIFLYTGR

XP_023527531.1 peroxisome biogenesis protein 2-like [Cucurbita pepo subsp. pepo]

2.4e-44

54.79

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Query:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------
        MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLS IPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK            
Subjt:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------

Query:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE
                                                                                             R+LARRAWLLIQRIE
Subjt:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE

Query:  GIYKAAAFGNLLIFLYTGR
        GIYKAAAFGNLLIFLYTGR
Subjt:  GIYKAAAFGNLLIFLYTGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDC6 Peroxin-2

2.5e-39

52.25

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Query:  MVLEALAAASST---ASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK---------
        MVLEALAAASST   ASPPSTSN NLPPPPEDAW+RA QRL PRWKSLSHSHLS IPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK         
Subjt:  MVLEALAAASST---ASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK---------

Query:  ----------------------------------------------------------------------------------------RTLARRAWLLIQ
                                                                                                R+LARRAWLLIQ
Subjt:  ----------------------------------------------------------------------------------------RTLARRAWLLIQ

Query:  RIEGIYKAAAFGNLLIFLYTGR
        RIEGIYKAAAFGNLLIFLYTGR
Subjt:  RIEGIYKAAAFGNLLIFLYTGR

A0A1S3BIJ1 Peroxin-2

1.4e-37

50.9

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Query:  MVLEALAAA---SSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK---------
        MVLEALAAA   SS+ SPPSTSN NLPPPPEDAW+ A QRL PRWKSLSHSHLS IPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK         
Subjt:  MVLEALAAA---SSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK---------

Query:  ----------------------------------------------------------------------------------------RTLARRAWLLIQ
                                                                                                R+LARRAWLLIQ
Subjt:  ----------------------------------------------------------------------------------------RTLARRAWLLIQ

Query:  RIEGIYKAAAFGNLLIFLYTGR
        RIEGIYKAAAFGNLLIFLYTGR
Subjt:  RIEGIYKAAAFGNLLIFLYTGR

A0A6J1DI27 Peroxin-2

2.9e-35

48.65

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Query:  MVLEALAAASST---ASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK---------
        MVLEALA AS+T   ASPPSTSN  LPPPP+DAW+ AYQ L P WKSLSHS +S IPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK         
Subjt:  MVLEALAAASST---ASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK---------

Query:  ----------------------------------------------------------------------------------------RTLARRAWLLIQ
                                                                                                R+LARRAWLLIQ
Subjt:  ----------------------------------------------------------------------------------------RTLARRAWLLIQ

Query:  RIEGIYKAAAFGNLLIFLYTGR
        RIEGIYKAAAFGNLLIFLYTGR
Subjt:  RIEGIYKAAAFGNLLIFLYTGR

A0A6J1GUS7 Peroxin-2

1.4e-45

55.71

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Query:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------
        MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK            
Subjt:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------

Query:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE
                                                                                             RTLARRAWLLIQRIE
Subjt:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE

Query:  GIYKAAAFGNLLIFLYTGR
        GIYKAAAFGNLLIFLYTGR
Subjt:  GIYKAAAFGNLLIFLYTGR

A0A6J1IUI0 Peroxin-2

1.5e-44

54.79

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Query:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------
        MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLS IPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK            
Subjt:  MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK------------

Query:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE
                                                                                             R+LARRAWLLIQRIE
Subjt:  -------------------------------------------------------------------------------------RTLARRAWLLIQRIE

Query:  GIYKAAAFGNLLIFLYTGR
        GIYKAAAFGNLLIFLYTGR
Subjt:  GIYKAAAFGNLLIFLYTGR

SwissProt top hits

e value

%identity

Alignment

Q9CA86 Peroxisome biogenesis protein 2

3.1e-18

36.22

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Query:  PPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK-------------------------------------
        P +DAW R+YQRL P  +SL  S  S IP++IS+VNQ DAARLD+EMSAMLKEQLVKVF LMK                                     
Subjt:  PPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK-------------------------------------

Query:  --------------------------------------------------------------RTLARRAWLLIQRIEGIYKAAAFGNLLIFLYTGR
                                                                      R LARR W L+QRIEGIYKAA+F NLL FLYTGR
Subjt:  --------------------------------------------------------------RTLARRAWLLIQRIEGIYKAAAFGNLLIFLYTGR

Arabidopsis top hits

e value

%identity

Alignment

AT1G79810.1 Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein

2.2e-19

36.22

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Query:  PPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK-------------------------------------
        P +DAW R+YQRL P  +SL  S  S IP++IS+VNQ DAARLD+EMSAMLKEQLVKVF LMK                                     
Subjt:  PPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMK-------------------------------------

Query:  --------------------------------------------------------------RTLARRAWLLIQRIEGIYKAAAFGNLLIFLYTGR
                                                                      R LARR W L+QRIEGIYKAA+F NLL FLYTGR
Subjt:  --------------------------------------------------------------RTLARRAWLLIQRIEGIYKAAAFGNLLIFLYTGR

AT1G79810.2 Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein

3.0e-08

77.14

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Query:  KRTLARRAWLLIQRIEGIYKAAAFGNLLIFLYTGR
        +R LARR W L+QRIEGIYKAA+F NLL FLYTGR
Subjt:  KRTLARRAWLLIQRIEGIYKAAAFGNLLIFLYTGR

Sequences

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CDS sequence

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ATGGTCTTAGAAGCCCTAGCAGCAGCCTCCTCCACTGCTTCGCCCCCTTCCACCAGCAACTTCAATCTTCCACCACCTCCTGAAGATGCGTGGAGTCGTGCTTATCAGCG
ACTACATCCTCGCTGGAAATCTCTTTCCCACTCTCACCTGTCGGCCATTCCAATTTCGATATCGAAAGTTAATCAAGTGGATGCGGCACGGCTAGATATTGAAATGTCGG
CCATGTTGAAAGAACAGCTGGTTAAGGTCTTTGCTTTGATGAAGAGGACACTGGCTAGACGAGCATGGCTTTTGATACAGCGCATAGAAGGAATATACAAAGCTGCTGCA
TTTGGCAACTTGCTCATATTTCTGTACACAGGAAGGTGTTTTCAAAGGATTCCGTGCTCGTACTATCAATGA

mRNA sequence

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TTGGACCGTGTTTGGTTGGGCAGAGGATCCAATTTGTGTTGCCCAAAGGAAAAAAGGGCACACAGACCCAAACGGAGCTGATTGATGAGGTAGCGGTTGCTCCGCGTTTG
GCGTCGCTCTTCGTCAATCACTTTTCTTCTTCTTCTTCTACAGTTCCTCTCCCGCCATTACCAGCACGACGGAGCTCCTTCTTCTTCACCGCTTCTCTCTGCAACCCTGA
TATTTGTCATGGTCTTAGAAGCCCTAGCAGCAGCCTCCTCCACTGCTTCGCCCCCTTCCACCAGCAACTTCAATCTTCCACCACCTCCTGAAGATGCGTGGAGTCGTGCT
TATCAGCGACTACATCCTCGCTGGAAATCTCTTTCCCACTCTCACCTGTCGGCCATTCCAATTTCGATATCGAAAGTTAATCAAGTGGATGCGGCACGGCTAGATATTGA
AATGTCGGCCATGTTGAAAGAACAGCTGGTTAAGGTCTTTGCTTTGATGAAGAGGACACTGGCTAGACGAGCATGGCTTTTGATACAGCGCATAGAAGGAATATACAAAG
CTGCTGCATTTGGCAACTTGCTCATATTTCTGTACACAGGAAGGTGTTTTCAAAGGATTCCGTGCTCGTACTATCAATGA

Protein sequence

Show/hide protein sequence

MVLEALAAASSTASPPSTSNFNLPPPPEDAWSRAYQRLHPRWKSLSHSHLSAIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKRTLARRAWLLIQRIEGIYKAAA
FGNLLIFLYTGRCFQRIPCSYYQ

CmoCh14G013370 (gene) of Cucurbita moschata (Rifu) v1 genome