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CmoCh14G013570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G013570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontitin homolog
Genome locationCmo_Chr14:11258580..11259472
RNA-Seq ExpressionCmoCh14G013570
SyntenyCmoCh14G013570
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581909.1 hypothetical protein SDJN03_21911, partial [Cucurbita argyrosperma subsp. sororia]1.2e-23100Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
        MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
XP_022955478.1 uncharacterized protein LOC111457491 [Cucurbita moschata]1.2e-23100Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
        MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
XP_022979405.1 uncharacterized protein LOC111479140 [Cucurbita maxima]4.9e-2296.23Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
        M DNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYT GPPFTFTPYSLKKQE
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
XP_023528206.1 uncharacterized protein LOC111791189 [Cucurbita pepo subsp. pepo]1.7e-2296.23Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
        M DNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPY LKKQE
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
XP_038881089.1 titin homolog isoform X1 [Benincasa hispida]3.8e-2284.75Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQEGLRSFC
        M DNCLFSEE+MAIDEAVGHP AYAKLCRDRQAGLYTHGPPFTFTPYSLKK+E +   C
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQEGLRSFC
TrEMBL top hitse value%identityAlignment
A0A0A0LB17 Uncharacterized protein4.5e-2192.45Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
        M DNCLFSE EMAIDEAVGHP AYAKLCRDRQAGLYTHGPPFTFTPYSLKK+E
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
A0A1S3BIF5 titin homolog2.2e-2090.57Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
        M DNCLFSE EMAIDEAVG+P AYAKLCRDRQAGLYTHGPPFTFTPYSLKK+E
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
A0A5D3DA54 Titin-like protein2.2e-2090.57Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
        M DNCLFSE EMAIDEAVG+P AYAKLCRDRQAGLYTHGPPFTFTPYSLKK+E
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
A0A6J1GU23 uncharacterized protein LOC1114574915.6e-24100Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
        MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
A0A6J1IT59 uncharacterized protein LOC1114791402.4e-2296.23Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
        M DNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYT GPPFTFTPYSLKKQE
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15550.1 unknown protein2.4e-1153.57Show/hide
Query:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQEGLR
        MGD  + +EE++ I+EA G+P AY K+CRD  A  Y +GPPFTF PY L++ E LR
Subjt:  MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQEGLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGACAATTGCTTGTTTAGTGAAGAAGAGATGGCGATCGACGAGGCTGTTGGCCACCCGCACGCTTACGCAAAGCTCTGCCGCGATCGACAAGCTGGATTGTACAC
TCATGGTCCTCCTTTCACTTTCACGCCGTATAGTCTGAAGAAACAAGAGGGATTGAGATCTTTCTGTTATTTTGGGGGAAATTTTACACGACTAGTCCTTAGTTCATTTC
TGTTCGCCAATAAACCGAAACCTCTCATTCTGAATTTCATTATTGTCTTTAATTGTGCTCGAATGGCTAAGAGCGGATTCGCTCATAACTTCAAACAAATTTACTTTTCT
TTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
CACTTACGCTCCTCTCAGTGTCCTCATCTGAGTCGAAGAAGACGAAGAGGGTTGAAGATAATGGGCGACAATTGCTTGTTTAGTGAAGAAGAGATGGCGATCGACGAGGC
TGTTGGCCACCCGCACGCTTACGCAAAGCTCTGCCGCGATCGACAAGCTGGATTGTACACTCATGGTCCTCCTTTCACTTTCACGCCGTATAGTCTGAAGAAACAAGAGG
GATTGAGATCTTTCTGTTATTTTGGGGGAAATTTTACACGACTAGTCCTTAGTTCATTTCTGTTCGCCAATAAACCGAAACCTCTCATTCTGAATTTCATTATTGTCTTT
AATTGTGCTCGAATGGCTAAGAGCGGATTCGCTCATAACTTCAAACAAATTTACTTTTCTTTTGCCTAA
Protein sequenceShow/hide protein sequence
MGDNCLFSEEEMAIDEAVGHPHAYAKLCRDRQAGLYTHGPPFTFTPYSLKKQEGLRSFCYFGGNFTRLVLSSFLFANKPKPLILNFIIVFNCARMAKSGFAHNFKQIYFS
FA