; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh14G013780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh14G013780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTir-nbs resistance protein
Genome locationCmo_Chr14:11364665..11365852
RNA-Seq ExpressionCmoCh14G013780
SyntenyCmoCh14G013780
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8667231.1 tir-nbs resistance protein [Hibiscus syriacus]3.6e-6744.74Show/hide
Query:  LPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYANA-VEDEVNEPETYEEASQNSAWQKAMEEETIALEQ
        L QK G     V + +S+D  +D N   V EQ VTQ          P  +R    I + N +YANA + ++  EPET+EEAS++S W  AM+EE  AL+Q
Subjt:  LPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYANA-VEDEVNEPETYEEASQNSAWQKAMEEETIALEQ

Query:  NQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMD
        NQTW++V + +D K ISCKW Y+I   PDGSI RYKA+ +  GFSQ+YGLDYDET SPVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM 
Subjt:  NQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMD

Query:  QPKKF-------------------------------------------------ENEVGVIDQYMQNLKKPYLDAARPTLRYVK----------------
        QP +                                                  +NEVGV+  YMQN KKP+L+  R  LRYV                 
Subjt:  QPKKF-------------------------------------------------ENEVGVIDQYMQNLKKPYLDAARPTLRYVK----------------

Query:  ----------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH
                  GDHDTRRS TGYVFKLGS TI WC KRQPT+SLST E EYRA A A QE+T    LM + H
Subjt:  ----------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH

KAE8672542.1 tir-nbs resistance protein [Hibiscus syriacus]2.5e-6545.09Show/hide
Query:  VHICSSADMPEDSNDTSVGEQEVT----------QPSE---PSENEMT-PQ-QLRHSEIILKENLEYANA-VEDEVNEPETYEEASQNSAWQKAMEEETI
        V + +S+D  ED N   V EQ VT          QP+E   PSE E + PQ QLR S  I + N +YANA + +E  EPET+EEAS++S W  AM+EE  
Subjt:  VHICSSADMPEDSNDTSVGEQEVT----------QPSE---PSENEMT-PQ-QLRHSEIILKENLEYANA-VEDEVNEPETYEEASQNSAWQKAMEEETI

Query:  ALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNRE
        AL+QNQTW++V + +D K IS KW Y+I   PD SI RYKA+ +  GFS +YGLDYDET S V K+  V+V   L  NKDW LWQMD+NNAFL  EL+RE
Subjt:  ALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNRE

Query:  FYMDQPKKFE---------------------------------------------------NEVGVIDQYMQNLKKPYLDAARPTLRYVK----------
         YM QP  F+                                                   NEVGV+ +YMQN KKP+L+A +  LRYVK          
Subjt:  FYMDQPKKFE---------------------------------------------------NEVGVIDQYMQNLKKPYLDAARPTLRYVK----------

Query:  ----------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH
                        GDHDTRRS TGYVFKLGSRTI  C+KRQPT+SLST E EYRA   A QE+T    LM + H
Subjt:  ----------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH

KAE8684576.1 hypothetical protein F3Y22_tig00111127pilonHSYRG00074 [Hibiscus syriacus]1.9e-6034.46Show/hide
Query:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT
        W  EKEVLP   +  + L Q MGE   ++ LQ   ++ E+      G+  E+ + QN         P +TG   Q          P +    S  E+ + 
Subjt:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT

Query:  QPSEPSENEMTPQQLRHSEIILKENLEYAN-AVEDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRY
        Q            QLR S  I + N +YAN A+ +E  EPET+EEAS++S W  AM+EE  AL+QNQTW++V + +D KLISCKW Y+I   PDGSI RY
Subjt:  QPSEPSENEMTPQQLRHSEIILKENLEYAN-AVEDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRY

Query:  KAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE---------------------------
        KA+ +  GFSQ+YGLDYDET SPVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP  F+++                           
Subjt:  KAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE---------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------VGVIDQYMQNLKKPYLDAARPTLRYVK--------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPT
                         VGV+ +YMQN KKP+L+A R  LRYVK                          GDHDTRRS TGYVFKLGS TI WC+KRQPT
Subjt:  -----------------VGVIDQYMQNLKKPYLDAARPTLRYVK--------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPT

Query:  ISLSTKEVEYRAVAGATQENTCFKLLMEDWH
        +SLST E EYRA A A QE+T    LM + H
Subjt:  ISLSTKEVEYRAVAGATQENTCFKLLMEDWH

KAE8704364.1 PLAC8 family protein [Hibiscus syriacus]1.1e-6541.61Show/hide
Query:  IVHICSSADMPEDSNDTSVGEQEVT----------QPSE---PSENEMT-PQ-QLRHSEIILKENLEYAN-AVEDEVNEPETYEEASQNSAWQKAMEEET
        +V + +S+D  +D N   V EQ VT          QP+E   PSE E + PQ QLR S  I + N +YAN A+ +EV E ET+EEASQ+S W  AM+EE 
Subjt:  IVHICSSADMPEDSNDTSVGEQEVT----------QPSE---PSENEMT-PQ-QLRHSEIILKENLEYAN-AVEDEVNEPETYEEASQNSAWQKAMEEET

Query:  IALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNR
         AL+QNQTW+LV + +D K ISCKW Y+I   PDGSI RYKA+ +  GFSQ+YGLDYDET SPVAK+  V+V  VL  NKDW LWQMD+ NAFL GEL+R
Subjt:  IALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNR

Query:  EFYMDQPKKFEN----------------------------------------------------------------------------------------
        E YM QP  F++                                                                                        
Subjt:  EFYMDQPKKFEN----------------------------------------------------------------------------------------

Query:  --------EVGVIDQYMQNLKKPYLDAARPTLRYVK--------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEV
                E G++ +YMQN KKP+L+A R  LRYVK                          GDHDTRRS TGYVFKLGSRTI WC+KRQPT+SLST E 
Subjt:  --------EVGVIDQYMQNLKKPYLDAARPTLRYVK--------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEV

Query:  EYRAVAGATQENTCFKLLMEDWH
        +YRA A A QE+T    LM + H
Subjt:  EYRAVAGATQENTCFKLLMEDWH

XP_022931186.1 probable inactive protein kinase DDB_G0270444 [Cucurbita moschata]1.4e-6067.45Show/hide
Query:  MATMEEHIDYEDEWIIDSGCLNHMIDDQSGAMEEGWPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQT---
        MA MEEHI+YED+WIID  CLNHMIDDQSGAMEEGWP EKEVL  LEQTEEILLQ+  EQTEEILLQ+  EQ EEIL+QN  EQTEEIL+QN  EQT   
Subjt:  MATMEEHIDYEDEWIIDSGCLNHMIDDQSGAMEEGWPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQT---

Query:  ---------------------------------EEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYA
                                         EEILPQKTG   QIVHIC SAD+PE S+DTS+GEQEVTQPSEPSENEMTPQQL+HSEIILK N E A
Subjt:  ---------------------------------EEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYA

Query:  NAVEDEVNEPET
        NAVEDEVNEPET
Subjt:  NAVEDEVNEPET

TrEMBL top hitse value%identityAlignment
A0A2N9EYD8 Uncharacterized protein1.5e-6638.4Show/hide
Query:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT
        W  EKEVL    +  + L Q MGE T  + LQ   ++  +      G+  E+ + QN         P +TG                      V +Q   
Subjt:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT

Query:  QPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSI
        +       E+TPQ QLR S    + N +YANA    E  + EPET+EEASQ+S W KAMEEE  AL+QNQTW+L+ +PRD K ISCKW Y+I   PDGSI
Subjt:  QPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSI

Query:  VRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE------------------------
         RYKA+ +  GFSQ+YGLDYDET SPVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP  F+N+                        
Subjt:  VRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE------------------------

Query:  -------------------------------------------------------------------------VGVIDQYMQNLKKPYLDAARPTLRYVK
                                                                                 V V+ +YMQN KKP+L+A R  LRYVK
Subjt:  -------------------------------------------------------------------------VGVIDQYMQNLKKPYLDAARPTLRYVK

Query:  --------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH
                                  GDHDTRRS TGYVFKLGS TI WC+KRQPT+SLST E EYRA A A QE+T    LM D H
Subjt:  --------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH

A0A2N9GCM1 Uncharacterized protein1.5e-6638.4Show/hide
Query:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT
        W  EKEVL    +  + L Q MGE T  + LQ   ++  +      G+  E+ + QN         P +TG                      V +Q   
Subjt:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT

Query:  QPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSI
        +       E+TPQ QLR S    + N +YANA    E  + EPET+EEASQ+S W KAMEEE  AL+QNQTW+L+ +PRD K ISCKW Y+I   PDGSI
Subjt:  QPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSI

Query:  VRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE------------------------
         RYKA+ +  GFSQ+YGLDYDET SPVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP  F+N+                        
Subjt:  VRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE------------------------

Query:  -------------------------------------------------------------------------VGVIDQYMQNLKKPYLDAARPTLRYVK
                                                                                 V V+ +YMQN KKP+L+A R  LRYVK
Subjt:  -------------------------------------------------------------------------VGVIDQYMQNLKKPYLDAARPTLRYVK

Query:  --------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH
                                  GDHDTRRS TGYVFKLGS TI WC+KRQPT+SLST E EYRA A A QE+T    LM D H
Subjt:  --------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH

A0A2N9GRJ7 Uncharacterized protein1.5e-6638.4Show/hide
Query:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT
        W  EKEVL    +  + L Q MGE T  + LQ   ++  +      G+  E+ + QN         P +TG                      V +Q   
Subjt:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT

Query:  QPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSI
        +       E+TPQ QLR S    + N +YANA    E  + EPET+EEASQ+S W KAMEEE  AL+QNQTW+L+ +PRD K ISCKW Y+I   PDGSI
Subjt:  QPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSI

Query:  VRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE------------------------
         RYKA+ +  GFSQ+YGLDYDET SPVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP  F+N+                        
Subjt:  VRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE------------------------

Query:  -------------------------------------------------------------------------VGVIDQYMQNLKKPYLDAARPTLRYVK
                                                                                 V V+ +YMQN KKP+L+A R  LRYVK
Subjt:  -------------------------------------------------------------------------VGVIDQYMQNLKKPYLDAARPTLRYVK

Query:  --------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH
                                  GDHDTRRS TGYVFKLGS TI WC+KRQPT+SLST E EYRA A A QE+T    LM D H
Subjt:  --------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH

A0A2N9HDK6 Uncharacterized protein1.5e-6638.4Show/hide
Query:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT
        W  EKEVL    +  + L Q MGE T  + LQ   ++  +      G+  E+ + QN         P +TG                      V +Q   
Subjt:  WPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVT

Query:  QPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSI
        +       E+TPQ QLR S    + N +YANA    E  + EPET+EEASQ+S W KAMEEE  AL+QNQTW+L+ +PRD K ISCKW Y+I   PDGSI
Subjt:  QPSEPSENEMTPQ-QLRHSEIILKENLEYANAV---EDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSI

Query:  VRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE------------------------
         RYKA+ +  GFSQ+YGLDYDET SPVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM QP  F+N+                        
Subjt:  VRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENE------------------------

Query:  -------------------------------------------------------------------------VGVIDQYMQNLKKPYLDAARPTLRYVK
                                                                                 V V+ +YMQN KKP+L+A R  LRYVK
Subjt:  -------------------------------------------------------------------------VGVIDQYMQNLKKPYLDAARPTLRYVK

Query:  --------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH
                                  GDHDTRRS TGYVFKLGS TI WC+KRQPT+SLST E EYRA A A QE+T    LM D H
Subjt:  --------------------------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH

A0A6A2WZM7 Tir-nbs resistance protein1.7e-6744.74Show/hide
Query:  LPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYANA-VEDEVNEPETYEEASQNSAWQKAMEEETIALEQ
        L QK G     V + +S+D  +D N   V EQ VTQ          P  +R    I + N +YANA + ++  EPET+EEAS++S W  AM+EE  AL+Q
Subjt:  LPQKTGGANQIVHICSSADMPEDSNDTSVGEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYANA-VEDEVNEPETYEEASQNSAWQKAMEEETIALEQ

Query:  NQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMD
        NQTW++V + +D K ISCKW Y+I   PDGSI RYKA+ +  GFSQ+YGLDYDET SPVAK+  V+V   L  NKDW LWQMD+ NAFL GEL+RE YM 
Subjt:  NQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMD

Query:  QPKKF-------------------------------------------------ENEVGVIDQYMQNLKKPYLDAARPTLRYVK----------------
        QP +                                                  +NEVGV+  YMQN KKP+L+  R  LRYV                 
Subjt:  QPKKF-------------------------------------------------ENEVGVIDQYMQNLKKPYLDAARPTLRYVK----------------

Query:  ----------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH
                  GDHDTRRS TGYVFKLGS TI WC KRQPT+SLST E EYRA A A QE+T    LM + H
Subjt:  ----------GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.0e-1631.52Show/hide
Query:  SENEMTPQQLRHSEIILKENLEYANAVEDEVNEPETYEE---ASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQ
        SE   T  Q+ ++E     N    NA     + P +++E       S+W++A+  E  A + N TW +  RP +  ++  +W + +     G+ +RYKA+
Subjt:  SENEMTPQQLRHSEIILKENLEYANAVEDEVNEPETYEE---ASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQ

Query:  TIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPK
         +  GF+Q+Y +DY+ET +PVA+I   +    L +  + K+ QMD+  AFL G L  E YM  P+
Subjt:  TIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-1927.21Show/hide
Query:  GAMEEGWPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSV
        G  E G+ L   V  ++ ++ +++ ++   +T      DM E+++  ++ N              E T + + ++     +++         E       
Subjt:  GAMEEGWPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQIVHICSSADMPEDSNDTSV

Query:  GEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYANA----VEDEVNEPETYEEA---SQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYE
        G +EV  P++  E     Q LR SE    E+  Y +     + D+  EPE+ +E     + +   KAM+EE  +L++N T++LV  P+  + + CKW ++
Subjt:  GEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYANA----VEDEVNEPETYEEA---SQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYE

Query:  IMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFE
        +    D  +VRYKA+ +  GF Q+ G+D+DE  SPV K+  ++    L  + D ++ Q+D+  AFL G+L  E YM+QP+ FE
Subjt:  IMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFE

P92520 Uncharacterized mitochondrial protein AtMg008208.4e-1134.23Show/hide
Query:  ILKENLEYANAVEDEV-NEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDET
        I K N +Y+  +   +  EP++   A ++  W +AM+EE  AL +N+TW LV  P +  ++ CKW ++     DG++ R KA+ +  GF QE G+ + ET
Subjt:  ILKENLEYANAVEDEV-NEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDET

Query:  ISPVAKIIIVQ
         SPV +   ++
Subjt:  ISPVAKIIIVQ

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.4e-2139.07Show/hide
Query:  ILKENLEYANAVE-DEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELV-SRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDE
        I+K N +Y+ AV     +EP T  +A ++  W+ AM  E  A   N TW+LV   P    ++ C+W +      DGS+ RYKA+ +  G++Q  GLDY E
Subjt:  ILKENLEYANAVE-DEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELV-SRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDE

Query:  TISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKF
        T SPV K   +++   + V++ W + Q+D+NNAFLQG L  + YM QP  F
Subjt:  TISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.6e-2239.1Show/hide
Query:  RHSEIILKENLEYANAVEDEVN-EPETYEEASQNSAWQKAMEEETIALEQNQTWELV-SRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYG
        R  + I K N +Y+ A     N EP T  +A ++  W++AM  E  A   N TW+LV   P    ++ C+W +      DGS+ RYKA+ +  G++Q  G
Subjt:  RHSEIILKENLEYANAVEDEVN-EPETYEEASQNSAWQKAMEEETIALEQNQTWELV-SRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYG

Query:  LDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKF
        LDY ET SPV K   +++   + V++ W + Q+D+NNAFLQG L  E YM QP  F
Subjt:  LDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKF

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.0e-2539.29Show/hide
Query:  EVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPV
        +  EP TY EA +   W  AM++E  A+E   TWE+ + P + K I CKW Y+I    DG+I RYKA+ +  G++Q+ G+D+ ET SPV K+  V++   
Subjt:  EVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPV

Query:  LTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENEVG
        ++   ++ L Q+D++NAFL G+L+ E YM  P  +    G
Subjt:  LTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENEVG

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.3e-0650Show/hide
Query:  DTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQE
        DTRRS  GY   LG+  I W +K+Q  +S S+ E EYRA++ AT E
Subjt:  DTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQE

ATMG00810.1 DNA/RNA polymerases superfamily protein3.7e-0650.98Show/hide
Query:  GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENT
        G   TRRS TG+   LG   I W  KRQPT+S S+ E EYRA+A    E T
Subjt:  GDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENT

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)5.9e-1234.23Show/hide
Query:  ILKENLEYANAVEDEV-NEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDET
        I K N +Y+  +   +  EP++   A ++  W +AM+EE  AL +N+TW LV  P +  ++ CKW ++     DG++ R KA+ +  GF QE G+ + ET
Subjt:  ILKENLEYANAVEDEV-NEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWAYEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDET

Query:  ISPVAKIIIVQ
         SPV +   ++
Subjt:  ISPVAKIIIVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAATGGAAGAGCATATCGATTATGAGGATGAATGGATCATTGATTCAGGATGCTTAAACCACATGATTGACGATCAAAGCGGTGCAATGGAAGAGGGGTGGCC
CTTAGAGAAGGAAGTATTACCACGCCTTGAGCAAACTGAAGAAATTCTTCTCCAGGACATGGGGGAGCAAACTGAAGAAATTCTTCTCCAGGACATGGGGGAGCAAATTG
AAGAAATTCTTCTCCAGAACATAGGGGAGCAAACTGAAGAGATTCTTCTCCAGAACATAGGGGAGCAAACTGAAGAGATTCTTCCACAAAAGACGGGGGGAGCAAATCAA
ATTGTACACATTTGCTCAAGTGCTGATATGCCTGAAGATTCAAATGACACTAGTGTTGGCGAGCAAGAAGTGACTCAACCAAGCGAGCCTAGTGAAAATGAAATGACACC
TCAACAACTCAGACATTCAGAAATAATCCTAAAGGAAAATCTAGAGTATGCCAACGCAGTAGAAGACGAAGTTAATGAGCCAGAGACATATGAAGAAGCATCACAAAACT
CAGCTTGGCAGAAAGCAATGGAGGAAGAAACTATAGCCCTAGAACAAAATCAGACTTGGGAATTAGTGTCAAGACCAAGAGATACCAAACTCATCTCTTGCAAGTGGGCT
TACGAAATAATGTGTACCCCGGATGGATCAATCGTGAGATACAAAGCTCAGACTATAGATTCAGGGTTCTCTCAAGAATATGGACTAGATTATGATGAAACGATTAGTCC
AGTGGCAAAGATCATTATCGTACAAGTTCCTCCAGTACTTACGGTAAATAAAGATTGGAAATTATGGCAGATGGATATGAATAATGCTTTCTTGCAGGGAGAGTTAAATA
GAGAGTTCTACATGGACCAACCGAAAAAATTCGAAAATGAAGTTGGAGTCATTGATCAATATATGCAAAATCTGAAGAAGCCTTATTTGGATGCAGCTCGACCGACCTTA
AGATATGTCAAAGGAGACCACGATACTCGAAGATCAATCACTGGGTATGTGTTCAAGCTCGGTTCAAGAACAATTTTTTGGTGTAACAAAAGACAACCAACAATATCATT
GTCAACTAAAGAAGTAGAGTACAGAGCAGTAGCTGGAGCAACTCAGGAAAATACATGCTTTAAACTTTTGATGGAAGATTGGCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGACAATGGAAGAGCATATCGATTATGAGGATGAATGGATCATTGATTCAGGATGCTTAAACCACATGATTGACGATCAAAGCGGTGCAATGGAAGAGGGGTGGCC
CTTAGAGAAGGAAGTATTACCACGCCTTGAGCAAACTGAAGAAATTCTTCTCCAGGACATGGGGGAGCAAACTGAAGAAATTCTTCTCCAGGACATGGGGGAGCAAATTG
AAGAAATTCTTCTCCAGAACATAGGGGAGCAAACTGAAGAGATTCTTCTCCAGAACATAGGGGAGCAAACTGAAGAGATTCTTCCACAAAAGACGGGGGGAGCAAATCAA
ATTGTACACATTTGCTCAAGTGCTGATATGCCTGAAGATTCAAATGACACTAGTGTTGGCGAGCAAGAAGTGACTCAACCAAGCGAGCCTAGTGAAAATGAAATGACACC
TCAACAACTCAGACATTCAGAAATAATCCTAAAGGAAAATCTAGAGTATGCCAACGCAGTAGAAGACGAAGTTAATGAGCCAGAGACATATGAAGAAGCATCACAAAACT
CAGCTTGGCAGAAAGCAATGGAGGAAGAAACTATAGCCCTAGAACAAAATCAGACTTGGGAATTAGTGTCAAGACCAAGAGATACCAAACTCATCTCTTGCAAGTGGGCT
TACGAAATAATGTGTACCCCGGATGGATCAATCGTGAGATACAAAGCTCAGACTATAGATTCAGGGTTCTCTCAAGAATATGGACTAGATTATGATGAAACGATTAGTCC
AGTGGCAAAGATCATTATCGTACAAGTTCCTCCAGTACTTACGGTAAATAAAGATTGGAAATTATGGCAGATGGATATGAATAATGCTTTCTTGCAGGGAGAGTTAAATA
GAGAGTTCTACATGGACCAACCGAAAAAATTCGAAAATGAAGTTGGAGTCATTGATCAATATATGCAAAATCTGAAGAAGCCTTATTTGGATGCAGCTCGACCGACCTTA
AGATATGTCAAAGGAGACCACGATACTCGAAGATCAATCACTGGGTATGTGTTCAAGCTCGGTTCAAGAACAATTTTTTGGTGTAACAAAAGACAACCAACAATATCATT
GTCAACTAAAGAAGTAGAGTACAGAGCAGTAGCTGGAGCAACTCAGGAAAATACATGCTTTAAACTTTTGATGGAAGATTGGCACTAG
Protein sequenceShow/hide protein sequence
MATMEEHIDYEDEWIIDSGCLNHMIDDQSGAMEEGWPLEKEVLPRLEQTEEILLQDMGEQTEEILLQDMGEQIEEILLQNIGEQTEEILLQNIGEQTEEILPQKTGGANQ
IVHICSSADMPEDSNDTSVGEQEVTQPSEPSENEMTPQQLRHSEIILKENLEYANAVEDEVNEPETYEEASQNSAWQKAMEEETIALEQNQTWELVSRPRDTKLISCKWA
YEIMCTPDGSIVRYKAQTIDSGFSQEYGLDYDETISPVAKIIIVQVPPVLTVNKDWKLWQMDMNNAFLQGELNREFYMDQPKKFENEVGVIDQYMQNLKKPYLDAARPTL
RYVKGDHDTRRSITGYVFKLGSRTIFWCNKRQPTISLSTKEVEYRAVAGATQENTCFKLLMEDWH